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This organism can only be binned in the context of its binning project AR_2015_1-01. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

L2_019_000M1_scaffold_36_9

Organism: L2_019_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 16
Location: 7697..7936

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S18 n=3 Tax=root RepID=D4L7H2_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 79.0
  • Bit_score: 163
  • Evalue 5.20e-38
SSU ribosomal protein S18P similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 79.0
  • Bit_score: 163
  • Evalue 1.50e-38
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 79.0
  • Bit_score: 163
  • Evalue 7.40e-38

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Taxonomy

Ruminococcus sp. CAG:108 → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 240
ATGGCAGACAGACCAATGAACCGTGGCAGAAAAGCTCGCAAGAAGGTTTGCGGCTTCTGTGTTGACAAGGTTGAGAATATCGATTACAAGGATATCGCTCGTCTTCGTCGTTATATGTCAGAAAGAGGAAAGATTCTTCCTCGCCGTGTAACAGGTACTTGCGCAAGACATCAGCGTGAGCTTACAGTTGCTATCAAGCGTGCTCGTCACCTTGCTTTGCTTCCTTACACAGCTGACTAA
PROTEIN sequence
Length: 80
MADRPMNRGRKARKKVCGFCVDKVENIDYKDIARLRRYMSERGKILPRRVTGTCARHQRELTVAIKRARHLALLPYTAD*