ggKbase home page

L2_019_000M1_scaffold_36_26

Organism: L2_019_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 19 / 38 MC: 16
Location: comp(21105..21773)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding helix-turn-helix protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DSA9_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 222.0
  • Bit_score: 434
  • Evalue 5.80e-119
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CCX83073.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 222.0
  • Bit_score: 434
  • Evalue 8.20e-119
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 234.0
  • Bit_score: 190
  • Evalue 4.20e-46

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ruminococcus sp. CAG:108 → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 669
TTGAACAAAGATTTTCCGAGAATTATAACATTTCTTCGTAAAGAAAGAGGTTTGAGTCAAAAACAGGTTGCAGGCGATATGGGAATTTCGCAGGCACTTTTGTCACATTATGAAAAGGGAATCCGTGAATGCGGTCTTGATTTTCTCGTAAAAACAGCCGAATACTACGGTGTTTCAACCGATTATCTTCTCGGCAGAACCGTACAGAGAAATTTCACAGCCGATCCTTTTGAGGCTGCCGAAAAAGAGGTTGTCATCAATACCGAAAAAGGCAGTATGATCAACAAAATAAACCGCAGTCTTTTGATGAACACCACCTCGGTAATCTACGATTTGCTTGCAAAAATCGGCAACAAGCACCTTACAAACGCAGTCAGCAACTACCTTATGAGCGCCGAATATGTAATTTTCCGCACGATTTATAATTCCGAAAAAAATAACTCGCAAACTATGTTTTCGCTTGATAAGAACCGCTACAGAAATCTCACGGACGCATCAATGATTCTTGACCTTGAACTCATCAACGAACTTATTGAAAACGATAAGCTTACCCTCACCCTCTCTCCTGATGTCATTTCGGTATGTTTTGAAAAAGACGCCCCGTCACTATTCAACCTAATTCAATATTCCGAAAGAAACATAAAAAATGTATATGCAGGGAAAAGGTGA
PROTEIN sequence
Length: 223
LNKDFPRIITFLRKERGLSQKQVAGDMGISQALLSHYEKGIRECGLDFLVKTAEYYGVSTDYLLGRTVQRNFTADPFEAAEKEVVINTEKGSMINKINRSLLMNTTSVIYDLLAKIGNKHLTNAVSNYLMSAEYVIFRTIYNSEKNNSQTMFSLDKNRYRNLTDASMILDLELINELIENDKLTLTLSPDVISVCFEKDAPSLFNLIQYSERNIKNVYAGKR*