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L2_019_000M1_scaffold_500

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000M1_scaffold_500_1
unknown

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comp(3..110)
DNA (108bp) protein (36aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002DABC75
L2_019_000M1_scaffold_500_2
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(403..2007)
DNA (1605bp) protein (535aa)
primary replicative DNA helicase (EC:3.6.1.-)
DNA helicase n=1 Tax=Alistipes sp. AP11 RepID=UPI0002F4E8E2
Replicative DNA helicase {ECO:0000313|EMBL:EHB91619.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
L2_019_000M1_scaffold_500_3
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2079..3824)
DNA (1746bp) protein (582aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002E2B664
Uncharacterized protein {ECO:0000313|EMBL:EHB91620.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
radical SAM protein YgiQ
L2_019_000M1_scaffold_500_4
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3859..5076)
DNA (1218bp) protein (406aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|SAAS:SAAS00094434};; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) (EC:5.-.-.-)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002FE5420
L2_019_000M1_scaffold_500_5
Bacteroides eggerthii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5193..6416
DNA (1224bp) protein (408aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00030C07CB
Calcineurin-like phosphoesterase {ECO:0000313|EMBL:EFV29605.1}; TaxID=665953 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides eggerthii 1_2_48FAA.;"
Predicted phosphohydrolases
L2_019_000M1_scaffold_500_6
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7261..8412)
DNA (1152bp) protein (384aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002EBE2B3
Uncharacterized protein {ECO:0000313|EMBL:KKB50261.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
alkyl hydroperoxide reductase
L2_019_000M1_scaffold_500_7
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8548..9309)
DNA (762bp) protein (254aa)
Malonyl-[acyl-carrier protein] O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00835}; Short=Malonyl-ACP O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00835};; EC=2.1.1.197 {ECO:0000256|HAMAP-Rule:MF_00835};; Biotin synthesis protein BioC {ECO:0000256|HAMAP-Rule:MF_00835}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00031FAABD
Biotin synthesis protein BioC
L2_019_000M1_scaffold_500_8
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9306..9959)
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002DA3CB7
Uncharacterized protein {ECO:0000313|EMBL:EHB91624.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
Biotin synthesis protein BioG
L2_019_000M1_scaffold_500_9
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9941..11062)
DNA (1122bp) protein (374aa)
8-amino-7-oxononanoate synthase (EC:2.3.1.47)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0003075EE0
Uncharacterized protein {ECO:0000313|EMBL:EHB91625.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
L2_019_000M1_scaffold_500_10
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11059..11859)
DNA (801bp) protein (267aa)
1,4-dihydroxy-6-naphtoate synthase {ECO:0000256|HAMAP-Rule:MF_00996}; EC=4.1.-.- {ECO:0000256|HAMAP-Rule:MF_00996};; Menaquinone biosynthetic enzyme MqnD {ECO:0000256|HAMAP-Rule:MF_00996}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002F0D2D1
periplasmic solute-binding protein
L2_019_000M1_scaffold_500_11
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11973..12584)
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002F51031
Uncharacterized protein {ECO:0000313|EMBL:EHB91627.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
family 1 phosphorylase-like purine phosphorylase
L2_019_000M1_scaffold_500_12
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(12544..12945)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002F1F7B7
Uncharacterized protein {ECO:0000313|EMBL:EHB91627.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein
L2_019_000M1_scaffold_500_13
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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13092..14162
DNA (1071bp) protein (357aa)
peptide chain release factor 1 n=1 Tax=Alistipes sp. AP11 RepID=UPI0003118C28
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
peptide chain release factor 1
L2_019_000M1_scaffold_500_14
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14571..15398
DNA (828bp) protein (276aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
Orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
orotidine 5''''-phosphate decarboxylase n=1 Tax=Alistipes sp. AP11 RepID=UPI0003001C7C
L2_019_000M1_scaffold_500_15
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15798..17231
DNA (1434bp) protein (478aa)
Aspartate ammonia-lyase {ECO:0000256|RuleBase:RU362017}; Short=Aspartase {ECO:0000256|RuleBase:RU362017};; EC=4.3.1.1 {ECO:0000256|RuleBase:RU362017};; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
aspartate ammonia-lyase (EC:4.3.1.1)
aspartate ammonia-lyase n=1 Tax=Alistipes sp. AP11 RepID=UPI0002F52C02
L2_019_000M1_scaffold_500_16
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17453..19633
DNA (2181bp) protein (727aa)
RelA/SpoT family (p)ppGpp synthetase n=1 Tax=Alistipes sp. AP11 RepID=UPI0002DA76AA
Uncharacterized protein {ECO:0000313|EMBL:EHB91632.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
RelA/SpoT family (p)ppGpp synthetase
L2_019_000M1_scaffold_500_17
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19654..21030
DNA (1377bp) protein (459aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0003021A9C
exonuclease VII, large subunit
L2_019_000M1_scaffold_500_18
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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21027..21221
DNA (195bp) protein (65aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|SAAS:SAAS00198686};; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
exodeoxyribonuclease VII, small subunit (EC:3.1.11.6)
exodeoxyribonuclease VII n=1 Tax=Alistipes sp. AP11 RepID=UPI0002F68786
L2_019_000M1_scaffold_500_19
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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21233..22036
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00031C0E95
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:AEI50064.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
L2_019_000M1_scaffold_500_20
Bacteroides cellulosilyticus CAG:158, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(22646..23722)
DNA (1077bp) protein (359aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002D3D8BC
Putative PHP domain protein {ECO:0000313|EMBL:CDB72456.1}; TaxID=1263038 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides cellulosilyticus CAG:158.;"
hypothetical protein
L2_019_000M1_scaffold_500_21
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

24248..25669
DNA (1422bp) protein (474aa)
putative glycoside hydrolase (EC:3.2.1.-)
Putative glycoside hydrolase {ECO:0000313|EMBL:BAM03056.1}; EC=3.2.1.- {ECO:0000313|EMBL:BAM03056.1};; TaxID=1142394 species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00036B5522
L2_019_000M1_scaffold_500_22
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25702..26112
DNA (411bp) protein (137aa)
alpha-L-fucosidase (EC:3.2.1.51)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00031E3B69
Uncharacterized protein {ECO:0000313|EMBL:EGN03702.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
L2_019_000M1_scaffold_500_23
Bacteroides salyersiae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(26144..27034)
DNA (891bp) protein (297aa)
Ribosomal RNA large subunit methyltransferase F {ECO:0000256|HAMAP-Rule:MF_01848, ECO:0000256|SAAS:SAAS00036602}; EC=2.1.1.181 {ECO:0000256|HAMAP-Rule:MF_01848, ECO:0000256|SAAS:SAAS00036596};; 23S rRNA mA1618 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01848}; rRNA adenine N-6-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01848}; TaxID=997887 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salyersiae CL02T12C01.;"
Ribosomal RNA large subunit methyltransferase F n=1 Tax=Bacteroides salyersiae CL02T12C01 RepID=I9TN33_9BACE
SAM-dependent methyltransferase
L2_019_000M1_scaffold_500_24
Bacteroides salyersiae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27554..28534
DNA (981bp) protein (327aa)
Pseudouridylate synthases, 23S RNA-specific (EC:5.4.99.12)
Pseudouridine synthase n=1 Tax=Bacteroides salyersiae CL02T12C01 RepID=I8Z5W7_9BACE
RluA family pseudouridine synthase {ECO:0000313|EMBL:EIY70845.1}; TaxID=997887 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salyersiae CL02T12C01.;"
Displaying 24 items

View Taxonomy