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L2_019_000M1_scaffold_563

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000M1_scaffold_563_1
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1..180)
DNA (180bp) protein (60aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002FD8B92
Uncharacterized protein {ECO:0000313|EMBL:EMG36770.1}; TaxID=1262666 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio africanus PCS.;"
hypothetical protein
L2_019_000M1_scaffold_563_2
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1628..2746
DNA (1119bp) protein (373aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002F3E6C1
Alkaline phosphatase family protein {ECO:0000313|EMBL:EDS03251.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
alkaline phosphatase
L2_019_000M1_scaffold_563_3
Tannerella sp. CAG:118, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3687..5420)
DNA (1734bp) protein (578aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002ECCD1A
Uncharacterized protein {ECO:0000313|EMBL:CCY37610.1}; TaxID=1262978 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:118.;"
protein of unknown function DUF1680
L2_019_000M1_scaffold_563_4
Lentisphaera araneosa, Lentisphaera, Lentisphaerales, Lentisphaeria, Lentisphaerae, Bacteria

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comp(5458..6510)
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002D3FAA5
Uncharacterized protein {ECO:0000313|EMBL:EDM25904.1}; TaxID=313628 species="Bacteria; Lentisphaerae; Lentisphaeria; Lentisphaerales; Lentisphaeraceae; Lentisphaera.;" source="Lentisphaera araneosa HTCC2155.;"
L2_019_000M1_scaffold_563_5
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7031..7555)
DNA (525bp) protein (175aa)
Translation initiation factor IF-3 n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H633_9BACT
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
translation initiation factor IF-3
L2_019_000M1_scaffold_563_6
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7761..9704)
DNA (1944bp) protein (648aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
threonyl-tRNA synthetase (EC:6.1.1.3)
threonyl-tRNA synthetase n=1 Tax=Alistipes sp. AP11 RepID=UPI0002F0B4B0
L2_019_000M1_scaffold_563_7
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9761..10858)
DNA (1098bp) protein (366aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262)
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Alistipes sp. AP11 RepID=UPI0002DEF8F0
L2_019_000M1_scaffold_563_8
Alistipes sp. CAG:435, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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11048..11881
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0003096910
Uncharacterized protein {ECO:0000313|EMBL:CDD19129.1}; TaxID=1262695 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:435.;"
L2_019_000M1_scaffold_563_9
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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12055..13149
DNA (1095bp) protein (365aa)
Enoyl-[acyl-carrier-protein] reductase (FMN) (EC:1.3.1.9)
2-nitropropane dioxygenase n=1 Tax=Alistipes sp. AP11 RepID=UPI0003684137
Uncharacterized protein {ECO:0000313|EMBL:EHB93122.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
L2_019_000M1_scaffold_563_10
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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13263..15479
DNA (2217bp) protein (739aa)
Copper-exporting ATPase {ECO:0000313|EMBL:EEY85049.1}; EC=3.6.3.4 {ECO:0000313|EMBL:EEY85049.1};; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002DAA40A
cation-transporting ATPase
L2_019_000M1_scaffold_563_11
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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15491..15697
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI000314D9E6
cation transport ATPase
Uncharacterized protein {ECO:0000313|EMBL:EKN33386.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L2_019_000M1_scaffold_563_12
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(16497..17492)
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002D45136
Uncharacterized protein {ECO:0000313|EMBL:EHB91972.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
cation diffusion facilitator family transporter
L2_019_000M1_scaffold_563_13
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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17746..18492
DNA (747bp) protein (249aa)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01039};; Short=dPGM {ECO:0000256|HAMAP-Rule:MF_01039};; EC=5.4.2.11 {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512};; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
gpmA; putative 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (EC:5.4.2.1)
phosphoglyceromutase n=1 Tax=Alistipes sp. AP11 RepID=UPI0003611129
L2_019_000M1_scaffold_563_14
Prevotella buccae, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18574..19626
DNA (1053bp) protein (351aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
fructose-bisphosphate aldolase n=1 Tax=Alistipes sp. AP11 RepID=UPI00031C8918
Deoxyribose-phosphate aldolase {ECO:0000313|EMBL:EFC75683.1}; TaxID=575611 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella buccae D17.;"
L2_019_000M1_scaffold_563_15
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20043..20609
DNA (567bp) protein (189aa)
alkyl hydroperoxide reductase n=1 Tax=Alistipes sp. AP11 RepID=UPI0002D26D25
alkyl hydroperoxide reductase subunit C
Peroxiredoxin {ECO:0000313|EMBL:EKA89587.1}; TaxID=1073386 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 610.;"
L2_019_000M1_scaffold_563_16
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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20703..22256
DNA (1554bp) protein (518aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002E25B26
Alkyl hydroperoxide reductase, F subunit {ECO:0000313|EMBL:EFI15470.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
alkyl hydroperoxide reductase
L2_019_000M1_scaffold_563_17
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(23049..24320)
DNA (1272bp) protein (424aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00030A0B87
Histidine kinase A domain protein {ECO:0000313|EMBL:CCX95346.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
sensor histidine kinase
L2_019_000M1_scaffold_563_18
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(24333..25019)
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00036A8029
Response regulator receiver domain protein {ECO:0000313|EMBL:CCX95345.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
transcriptional regulator
L2_019_000M1_scaffold_563_19
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25262..25714)
DNA (453bp) protein (151aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0003048DE3
cytosine/adenosine deaminase
L2_019_000M1_scaffold_563_20
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

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comp(25832..26047)
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI000371DF7E
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
Displaying 20 items

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