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L2_019_000M1_scaffold_687

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000M1_scaffold_687_1
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..184
-----------------
DNA (183bp)
protein (61aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
Glucose-1-phosphate thymidylyltransferase n=2 Tax=Alistipes indistinctus YIT 12060 RepID=G5HBN2_9BACT
glucose-1-phosphate thymidylyltransferase
L2_019_000M1_scaffold_687_2
unknown

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comp(239..1015)
-----------------
DNA (777bp)
protein (259aa)

This feature has no annotations

L2_019_000M1_scaffold_687_3
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1050..1625
-----------------
DNA (576bp)
protein (192aa)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Alistipes sp. AP11 RepID=UPI0003066646
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EHB91193.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
dTDP-4-dehydrorhamnose 3,5-epimerase
L2_019_000M1_scaffold_687_4
Bifidobacterium stellenboschense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1677..2525
-----------------
DNA (849bp)
protein (283aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00030A15C6
Uncharacterized protein {ECO:0000313|EMBL:KFI96911.1}; TaxID=762211 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stellenboschense.;"
hypothetical protein
L2_019_000M1_scaffold_687_5
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2541..3455
-----------------
DNA (915bp)
protein (305aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H6L0_9BACT
L2_019_000M1_scaffold_687_6
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3519..5051
-----------------
DNA (1533bp)
protein (511aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0003164022
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EEZ04324.1}; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
multi antimicrobial extrusion protein MatE
L2_019_000M1_scaffold_687_7
Alistipes sp. CAG:514, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5075..5911
-----------------
DNA (837bp)
protein (279aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI000366EA51
Uncharacterized protein {ECO:0000313|EMBL:CCX52063.1}; TaxID=1262696 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:514.;"
short-chain dehydrogenase
L2_019_000M1_scaffold_687_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5945..7690
-----------------
DNA (1746bp)
protein (582aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002E8186C
Uncharacterized protein {ECO:0000313|EMBL:EIY97106.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
thiamine pyrophosphate TPP-binding domain-containing protein
L2_019_000M1_scaffold_687_9
Prevotella nigrescens, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7704..8801
-----------------
DNA (1098bp)
protein (366aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00036B2462
Uncharacterized protein {ECO:0000313|EMBL:ETD26233.1}; TaxID=1073366 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella nigrescens CC14M.;"
hypothetical protein
L2_019_000M1_scaffold_687_10
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8814..9920
-----------------
DNA (1107bp)
protein (369aa)
glycosyltransferase group 1 family protein (EC:2.4.-.-)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002FE9B9E
Uncharacterized protein {ECO:0000313|EMBL:KKB54537.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
L2_019_000M1_scaffold_687_11
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9943..10989
-----------------
DNA (1047bp)
protein (349aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002F8DEA8
Uncharacterized protein {ECO:0000313|EMBL:EHB93010.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
putative LPS biosynthesis protein
L2_019_000M1_scaffold_687_12
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10986..11723
-----------------
DNA (738bp)
protein (246aa)
LPS biosynthesis glycosyltransferase n=1 Tax=Alistipes sp. AP11 RepID=UPI00036D22A1
Uncharacterized protein {ECO:0000313|EMBL:EHB93009.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
putative LPS biosynthesis glycosyltransferase
L2_019_000M1_scaffold_687_13
Bacteroides eggerthii CAG:109, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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11732..12868
-----------------
DNA (1137bp)
protein (379aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002E375D1
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:CCY55406.1}; TaxID=1263043 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides eggerthii CAG:109.;"
nucleoside-diphosphate-sugar epimerase
L2_019_000M1_scaffold_687_14
Bacteroides eggerthii CAG:109, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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13293..14285
-----------------
DNA (993bp)
protein (331aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI000318ABE7
Eps11J {ECO:0000313|EMBL:CCY55407.1}; TaxID=1263043 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides eggerthii CAG:109.;"
hypothetical protein
L2_019_000M1_scaffold_687_15
unknown

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comp(14813..16813)
-----------------
DNA (2001bp)
protein (667aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI000365FD10
L2_019_000M1_scaffold_687_16
unknown

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comp(16819..17004)
-----------------
DNA (186bp)
protein (62aa)

This feature has no annotations

L2_019_000M1_scaffold_687_17
GWC2_Clostridiales_40_7_curated, Clostridiales, Bacteria

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17204..18658
-----------------
DNA (1455bp)
protein (485aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002E85B68
AraC family transcriptional regulator
Tax=GWC2_Clostridiales_40_7_curated
L2_019_000M1_scaffold_687_18
GWA2_Bacteroidetes_31_9b_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(19108..19797)
-----------------
DNA (690bp)
protein (230aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002EAC99D
HAD hydrolase, subfamily IA
Tax=GWA2_Bacteroidetes_31_9b_curated
L2_019_000M1_scaffold_687_19
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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19996..20676
-----------------
DNA (681bp)
protein (227aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002EFE312
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ35146.1}; TaxID=351160 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella arvoryzae (strain DSM 22066 / NBRC 105507 / MRE50).;"
L2_019_000M1_scaffold_687_20
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(21024..21440)
-----------------
DNA (417bp)
protein (139aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI000365D3D8
Uncharacterized protein {ECO:0000313|EMBL:EHB92592.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
YjeE family ATPase
L2_019_000M1_scaffold_687_21
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(21779..23332)
-----------------
DNA (1554bp)
protein (518aa)
chemotaxis protein CheY n=1 Tax=Alistipes sp. AP11 RepID=UPI000301E1A8
Uncharacterized protein {ECO:0000313|EMBL:EHB92591.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
L2_019_000M1_scaffold_687_22
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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23789..24073
-----------------
DNA (285bp)
protein (95aa)
Putative uncharacterized protein n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H6U3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHB92940.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
Bacterial nucleoid DNA-binding protein
L2_019_000M1_scaffold_687_23
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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24360..24896
-----------------
DNA (537bp)
protein (179aa)
ribonuclease G n=1 Tax=Alistipes sp. AP11 RepID=UPI0002D69F91
Uncharacterized protein {ECO:0000313|EMBL:EHB92938.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
ribonuclease, Rne/Rng family
Displaying 23 items

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