ggKbase home page

L2_019_000M1_scaffold_732

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000M1_scaffold_732_1
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3..3452
DNA (3450bp) protein (1150aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
DNA polymerase III subunit alpha n=1 Tax=Alistipes sp. AP11 RepID=UPI000377FE8F
DNA polymerase III subunit alpha
L2_019_000M1_scaffold_732_2
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3586..3900
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI000367C727
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
thioredoxin
L2_019_000M1_scaffold_732_3
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4360..5259)
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002F62E14
Uncharacterized protein {ECO:0000313|EMBL:EHB92271.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein
L2_019_000M1_scaffold_732_4
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5709..6578)
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002EC489A
Uncharacterized protein {ECO:0000313|EMBL:CDD25866.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L2_019_000M1_scaffold_732_5
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6880..8571
DNA (1692bp) protein (564aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002F4E15D
Uncharacterized protein {ECO:0000313|EMBL:EGK04305.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
hypothetical protein
L2_019_000M1_scaffold_732_6
unknown

Not on your lists

8866..9318
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00038174B7
L2_019_000M1_scaffold_732_7
unknown

Not on your lists

9613..9978
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00035C9AA5
L2_019_000M1_scaffold_732_8
unknown

Not on your lists

comp(9900..10526)
DNA (627bp) protein (209aa)

This feature has no annotations

L2_019_000M1_scaffold_732_9
Coprobacter fastidiosus, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10532..10885
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0003612240
DNA-binding protein {ECO:0000313|EMBL:ERM88077.1}; TaxID=1349822 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter fastidiosus NSB1.;"
regulatory protein MarR
L2_019_000M1_scaffold_732_10
Bacteroides pyogenes, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10905..11108
DNA (204bp) protein (68aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K0X2B5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:GAE21004.1}; TaxID=1235813 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides pyogenes JCM 10003.;"
membrane protein
L2_019_000M1_scaffold_732_11
unknown

Not on your lists

11092..11328
DNA (237bp) protein (79aa)

This feature has no annotations

L2_019_000M1_scaffold_732_12
Bacteroides graminisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11333..11803
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00036881DF
Thioredoxin {ECO:0000313|EMBL:GAK35545.1}; TaxID=1121097 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides graminisolvens DSM 19988 = JCM 15093.;"
thioredoxin
L2_019_000M1_scaffold_732_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12149..13201)
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002D385B8
Uncharacterized protein {ECO:0000313|EMBL:EXY73009.1}; TaxID=1339315 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3988T(B)14.;"
putative integral membrane protein
L2_019_000M1_scaffold_732_14
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13348..15051)
DNA (1704bp) protein (568aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002F01125
Aspartate-alanine antiporter {ECO:0000313|EMBL:CDE63498.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
putative transport protein
L2_019_000M1_scaffold_732_15
unknown

Not on your lists

comp(15762..15914)
DNA (153bp) protein (51aa)

This feature has no annotations

L2_019_000M1_scaffold_732_16
Mucinivorans hirudinis, Mucinivorans, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15972..17096
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI000316C28E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDN31913.1}; TaxID=1433126 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Mucinivorans.;" source="Mucinivorans hirudinis.;"
L2_019_000M1_scaffold_732_17
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

comp(17475..18158)
DNA (684bp) protein (228aa)
Reverse transcriptase (RNA-dependent DNA polymerase) id=4095945 bin=GWF2_OP3_43_52 species=Spirochaeta africana genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
putative reverse transcriptase
Tax=GWF2_WOR_2_43_52_curated
L2_019_000M1_scaffold_732_18
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18927..19451
DNA (525bp) protein (175aa)
Uncharacterized protein (Fragment) n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BEP8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC95091.1}; Flags: Fragment;; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
hypothetical protein
L2_019_000M1_scaffold_732_19
Bacteroides finegoldii CAG:203, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19456..19983
DNA (528bp) protein (176aa)
Putative transmembrane protein n=1 Tax=Bacteroides finegoldii CAG:203 RepID=R6RTR0_9BACE
Putative transmembrane protein {ECO:0000313|EMBL:CDC52343.1}; TaxID=1263045 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides finegoldii CAG:203.;"
hypothetical protein
L2_019_000M1_scaffold_732_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20057..20506)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9U3G7_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY76403.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
Displaying 20 items

View Taxonomy