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L2_019_000M1_scaffold_892

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000M1_scaffold_892_1
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(174..1094)
-----------------
DNA (921bp)
protein (307aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI000303088B
Uncharacterized protein {ECO:0000313|EMBL:EHB92264.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
transcriptional regulator
L2_019_000M1_scaffold_892_2
unknown

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1145..2041
-----------------
DNA (897bp)
protein (299aa)

This feature has no annotations

L2_019_000M1_scaffold_892_3
GWF2_Planctomycetes_41_51_curated, Phycisphaerae, Planctomycetes, Bacteria

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comp(2005..2922)
-----------------
DNA (918bp)
protein (306aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00030B4314
Predicted hydrolase (metallo-beta-lactamase superfamily)
Tax=GWF2_Planctomycetes_41_51_curated
L2_019_000M1_scaffold_892_4
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(2956..4377)
-----------------
DNA (1422bp)
protein (474aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002D59A0B
hypothetical protein
Tax=RBG_13_Bacteroidetes_42_15_curated
L2_019_000M1_scaffold_892_5
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4463..6460)
-----------------
DNA (1998bp)
protein (666aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0003709E66
Uncharacterized protein {ECO:0000313|EMBL:EHB92251.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
Tetratricopeptide repeat.
L2_019_000M1_scaffold_892_6
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6674..7939
-----------------
DNA (1266bp)
protein (422aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
Adenylosuccinate synthetase (EC:6.3.4.4)
adenylosuccinate synthetase n=1 Tax=Alistipes sp. AP11 RepID=UPI00036211EB
L2_019_000M1_scaffold_892_7
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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7978..8658
-----------------
DNA (681bp)
protein (227aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00038164A2
OmpA/MotB domain-containing protein
Tax=GWE2_Bacteroidetes_42_39_curated
L2_019_000M1_scaffold_892_8
Bacteroides nordii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8835..9380)
-----------------
DNA (546bp)
protein (182aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002D45C4B
Uncharacterized protein {ECO:0000313|EMBL:EIY52630.1}; TaxID=997884 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides nordii CL02T12C05.;"
uncharacterized protein
L2_019_000M1_scaffold_892_9
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9604..11478
-----------------
DNA (1875bp)
protein (625aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002EA004C
Uncharacterized protein {ECO:0000313|EMBL:EHB92238.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
ABC transporter ATPase
L2_019_000M1_scaffold_892_10
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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11709..12638
-----------------
DNA (930bp)
protein (310aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002F969FD
glycerophosphoryl diester phosphodiesterase
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:ADZ77020.1}; Flags: Precursor;; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
L2_019_000M1_scaffold_892_11
Odoribacter laneus CAG:561, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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13009..14694
-----------------
DNA (1686bp)
protein (562aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002F6F319
Uncharacterized protein {ECO:0000313|EMBL:CCZ82731.1}; TaxID=1263089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter laneus CAG:561.;"
L2_019_000M1_scaffold_892_12
Odoribacter sp. CAG:788, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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14691..15176
-----------------
DNA (486bp)
protein (162aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0003011100
Uncharacterized protein {ECO:0000313|EMBL:CCZ10943.1}; TaxID=1262909 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter sp. CAG:788.;"
acetyltransferase
L2_019_000M1_scaffold_892_13
Odoribacter sp. CAG:788, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(15557..16975)
-----------------
DNA (1419bp)
protein (473aa)
Domain of unknown function (DUF303). (EC:3.1.1.53)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00031D0631
Uncharacterized protein {ECO:0000313|EMBL:CCZ06444.1}; TaxID=1262909 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter sp. CAG:788.;"
L2_019_000M1_scaffold_892_14
unknown

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comp(17395..18276)
-----------------
DNA (882bp)
protein (294aa)

This feature has no annotations

L2_019_000M1_scaffold_892_15
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18430..19527)
-----------------
DNA (1098bp)
protein (366aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0003646842
Uncharacterized protein {ECO:0000313|EMBL:EHB92236.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
FAD synthase
L2_019_000M1_scaffold_892_16
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(19582..20241)
-----------------
DNA (660bp)
protein (220aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00664, ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00664, ECO:0000256|SAAS:SAAS00093350};; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI000301B591
phosphatidylserine decarboxylase
L2_019_000M1_scaffold_892_17
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(20257..21189)
-----------------
DNA (933bp)
protein (311aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
CDP-diglyceride synthetase (EC:2.7.7.41)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002FEE78B
L2_019_000M1_scaffold_892_18
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(21131..23101)
-----------------
DNA (1971bp)
protein (657aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
ATP-dependent metalloprotease FtsH (EC:3.4.24.-)
peptidase M41 n=1 Tax=Alistipes sp. AP11 RepID=UPI0003800A7A
L2_019_000M1_scaffold_892_19
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(23172..23522)
-----------------
DNA (351bp)
protein (117aa)
ribosome-associated protein IOJAP n=1 Tax=Alistipes sp. AP11 RepID=UPI0002D725F0
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
iojap-related protein
L2_019_000M1_scaffold_892_20
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(23680..24585)
-----------------
DNA (906bp)
protein (302aa)
transcriptional regulator n=1 Tax=Alistipes sp. AP11 RepID=UPI0002D543C4
Uncharacterized protein {ECO:0000313|EMBL:EHB92231.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
Transcriptional regulator
L2_019_000M1_scaffold_892_21
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(24738..25679)
-----------------
DNA (942bp)
protein (314aa)
radical SAM protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0003065E82
TIGR01212 family radical SAM protein {ECO:0000313|EMBL:EHB92230.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
radical SAM protein
L2_019_000M1_scaffold_892_22
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(25711..26430)
-----------------
DNA (720bp)
protein (240aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00037ECEEB
Uncharacterized protein {ECO:0000313|EMBL:EHB92229.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
hypothetical protein
L2_019_000M1_scaffold_892_23
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(26818..27600)
-----------------
DNA (783bp)
protein (261aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI000300A0DB
S1/P1 Nuclease.
S1/P1 Nuclease {ECO:0000313|EMBL:CBK65148.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L2_019_000M1_scaffold_892_24
unknown

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28032..30434
-----------------
DNA (2403bp)
protein (801aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002D93832
Displaying 24 items

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