ggKbase home page

L2_019_000M1_scaffold_625

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000M1_scaffold_625_1
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1..945
-----------------
DNA (945bp)
protein (315aa)
hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit (EC:4.2.1.2)
fumarate hydratase n=1 Tax=Butyricimonas synergistica RepID=UPI0003727218
Fumarate hydratase {ECO:0000313|EMBL:KIO44175.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
L2_019_000M1_scaffold_625_2
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1074..1289)
-----------------
DNA (216bp)
protein (72aa)
rubredoxin n=1 Tax=Butyricimonas synergistica RepID=UPI00037D382C
Rubredoxin {ECO:0000256|PIRNR:PIRNR000071}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
rubredoxin-type Fe(Cys)4 protein
L2_019_000M1_scaffold_625_3
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1289..2665)
-----------------
DNA (1377bp)
protein (459aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002ECEE1E
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492, ECO:0000313|EMBL:KIO44174.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
aldehyde dehydrogenase
L2_019_000M1_scaffold_625_4
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2784..3776
-----------------
DNA (993bp)
protein (331aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI0003665570
Uncharacterized protein {ECO:0000313|EMBL:KIO44173.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
hypothetical protein
L2_019_000M1_scaffold_625_5
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3923..4831)
-----------------
DNA (909bp)
protein (303aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00037FDE3A
tRNA dimethylallyltransferase
L2_019_000M1_scaffold_625_6
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4927..5532)
-----------------
DNA (606bp)
protein (202aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00036666DA
Uncharacterized protein {ECO:0000313|EMBL:KIO44171.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
hypothetical protein
L2_019_000M1_scaffold_625_7
Odoribacter laneus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5546..5872)
-----------------
DNA (327bp)
protein (109aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI0003641090
Uncharacterized protein {ECO:0000313|EMBL:EHP48813.1}; TaxID=742817 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter laneus YIT 12061.;"
hypothetical protein
L2_019_000M1_scaffold_625_8
Odoribacter sp. CAG:788, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5883..6188)
-----------------
DNA (306bp)
protein (102aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI0003635E0D
Uncharacterized protein {ECO:0000313|EMBL:CCZ06056.1}; TaxID=1262909 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter sp. CAG:788.;"
hypothetical protein
L2_019_000M1_scaffold_625_9
Odoribacter laneus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6181..6516)
-----------------
DNA (336bp)
protein (112aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI0003641090
Uncharacterized protein {ECO:0000313|EMBL:EHP48813.1}; TaxID=742817 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter laneus YIT 12061.;"
hypothetical protein
L2_019_000M1_scaffold_625_10
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6534..7625)
-----------------
DNA (1092bp)
protein (364aa)
Serine--pyruvate transaminase (EC:2.6.1.51)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00037369C0
Aminotransferase {ECO:0000313|EMBL:KIO44168.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
L2_019_000M1_scaffold_625_11
Bacteroides sp. CAG:144, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8148..8759
-----------------
DNA (612bp)
protein (204aa)
NADPH-dependent FMN reductase n=1 Tax=Bacteroides sp. CAG:144 RepID=R5Y8T9_9BACE
NADPH-dependent FMN reductase {ECO:0000313|EMBL:CDA21159.1}; TaxID=1262736 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:144.;"
NADPH-dependent FMN reductase
L2_019_000M1_scaffold_625_12
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8989..9345
-----------------
DNA (357bp)
protein (119aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI0003756799
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
iojap-like protein
L2_019_000M1_scaffold_625_13
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9354..11333
-----------------
DNA (1980bp)
protein (660aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
peptidase M41 n=1 Tax=Butyricimonas synergistica RepID=UPI000366976A
L2_019_000M1_scaffold_625_14
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11392..11601
-----------------
DNA (210bp)
protein (70aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI000365F20D
Uncharacterized protein {ECO:0000313|EMBL:KIO44164.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
hypothetical protein
L2_019_000M1_scaffold_625_15
unknown

Not on your lists

comp(11645..11815)
-----------------
DNA (171bp)
protein (57aa)

This feature has no annotations

L2_019_000M1_scaffold_625_16
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11987..12403
-----------------
DNA (417bp)
protein (139aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938, ECO:0000313|EMBL:KIO44163.1}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00037B0800
phosphatidate cytidylyltransferase
L2_019_000M1_scaffold_625_17
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12440..13111
-----------------
DNA (672bp)
protein (224aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00664, ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00664, ECO:0000256|SAAS:SAAS00093350};; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
Phosphatidylserine decarboxylase proenzyme (EC:4.1.1.65)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00036CDACC
L2_019_000M1_scaffold_625_18
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13143..13958
-----------------
DNA (816bp)
protein (272aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Butyricimonas synergistica RepID=UPI00036C01EF
L2_019_000M1_scaffold_625_19
Odoribacter splanchnicus CAG:14, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14035..14733
-----------------
DNA (699bp)
protein (233aa)
ribosomal large subunit pseudouridine synthase D n=1 Tax=Butyricimonas synergistica RepID=UPI0003804CD0
Pseudouridine synthase {ECO:0000313|EMBL:CDB07482.1}; TaxID=1263090 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter splanchnicus CAG:14.;"
pseudouridine synthase
L2_019_000M1_scaffold_625_20
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14931..17567)
-----------------
DNA (2637bp)
protein (879aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00037760CF
Uncharacterized protein {ECO:0000313|EMBL:KIO45988.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
hypothetical protein
L2_019_000M1_scaffold_625_21
unknown

Not on your lists

comp(17604..17696)
-----------------
DNA (93bp)
protein (31aa)

This feature has no annotations

L2_019_000M1_scaffold_625_22
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17740..19014)
-----------------
DNA (1275bp)
protein (425aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI0003745599
Uncharacterized protein {ECO:0000313|EMBL:KIO45878.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
hypothetical protein
L2_019_000M1_scaffold_625_23
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19044..19244)
-----------------
DNA (201bp)
protein (67aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI0003651488
Uncharacterized protein {ECO:0000313|EMBL:KIO45879.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
L2_019_000M1_scaffold_625_24
unknown

Not on your lists

comp(19183..19284)
-----------------
DNA (102bp)
protein (34aa)

This feature has no annotations

L2_019_000M1_scaffold_625_25
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19271..20674)
-----------------
DNA (1404bp)
protein (468aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI000363532A
Glycan metabolism protein {ECO:0000313|EMBL:KIO45880.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
RagB/SusD domain-containing protein
L2_019_000M1_scaffold_625_26
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20675..23737)
-----------------
DNA (3063bp)
protein (1021aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00036B3875
Membrane protein {ECO:0000313|EMBL:KIO45881.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
TonB-dependent receptor plug
Displaying 26 items

View Taxonomy