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L2_019_000M1_scaffold_399

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_000M1_scaffold_399_1
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1..267)
-----------------
DNA (267bp)
protein (89aa)
3-deoxy-D-manno-octulosonic-acid transferase n=5 Tax=root RepID=B0MUK6_9BACT
3-deoxy-D-manno-octulosonic-acid transferase {ECO:0000313|EMBL:CDE63398.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
3-deoxy-D-manno-octulosonic-acid transferase
L2_019_000M1_scaffold_399_2

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comp(335..700)
-----------------
DNA (366bp)
protein (122aa)
Protein containing Uncharacterized protein family UPF0102 domain protein (Fragment) n=2 Tax=human gut metagenome RepID=K1TQQ3_9ZZZZ
Protein containing Uncharacterized protein family UPF0102 domain protein {ECO:0000313|EMBL:EKC61656.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Predicted endonuclease distantly related to archaeal Holliday junction resolvase
L2_019_000M1_scaffold_399_3
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(697..1269)
-----------------
DNA (573bp)
protein (191aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JI44_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE63396.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
lipopolysaccharide core biosynthesis protein LpsA
L2_019_000M1_scaffold_399_4
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1251..1715)
-----------------
DNA (465bp)
protein (155aa)
Uncharacterized protein n=3 Tax=root RepID=B0MUK9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE63394.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
lipopolysaccharide biosynthesis protein
L2_019_000M1_scaffold_399_5
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1768..2469)
-----------------
DNA (702bp)
protein (234aa)
Dipeptidase E n=3 Tax=root RepID=B0MUL0_9BACT
Dipeptidase E {ECO:0000313|EMBL:CDE63391.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
peptidase E
L2_019_000M1_scaffold_399_6
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2635..2871
-----------------
DNA (237bp)
protein (79aa)
Acyl carrier protein n=2 Tax=Alistipes RepID=B0MUL1_9BACT
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
acyl carrier protein
L2_019_000M1_scaffold_399_7
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2914..4161
-----------------
DNA (1248bp)
protein (416aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=3 Tax=root RepID=B0MUL2_9BACT
beta-ketoacyl-acyl-carrier-protein synthase II
L2_019_000M1_scaffold_399_8
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4177..4971
-----------------
DNA (795bp)
protein (265aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease 3; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 n=4 Tax=root RepID=B0MUL3_9BACT
L2_019_000M1_scaffold_399_9
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4968..5612
-----------------
DNA (645bp)
protein (215aa)
DNA repair protein RadC n=3 Tax=root RepID=B0MUL4_9BACT
DNA repair protein RadC {ECO:0000313|EMBL:EDS03669.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
DNA repair protein radc
L2_019_000M1_scaffold_399_10
unknown

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comp(5560..6123)
-----------------
DNA (564bp)
protein (188aa)

This feature has no annotations

L2_019_000M1_scaffold_399_11
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6148..7488)
-----------------
DNA (1341bp)
protein (447aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JI34_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE63381.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein
L2_019_000M1_scaffold_399_12
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


7667..9211
-----------------
DNA (1545bp)
protein (515aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
glycyl-tRNA synthetase (EC:6.1.1.14)
Glycine--tRNA ligase n=3 Tax=root RepID=B0MUL7_9BACT
L2_019_000M1_scaffold_399_13

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9333..9746
-----------------
DNA (414bp)
protein (138aa)
Holliday junction resolvase-like protein n=3 Tax=root RepID=K1UH58_9ZZZZ
Holliday junction resolvase-like protein {ECO:0000313|EMBL:EKC77625.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
RNAse H-fold protein YqgF
L2_019_000M1_scaffold_399_14

Not on your lists

9772..10329
-----------------
DNA (558bp)
protein (186aa)
Peptide deformylase n=3 Tax=root RepID=K1UCE5_9ZZZZ
Peptide deformylase {ECO:0000313|EMBL:EKC77624.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
peptide deformylase
L2_019_000M1_scaffold_399_15
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10518..10979
-----------------
DNA (462bp)
protein (154aa)
Uncharacterized protein n=3 Tax=root RepID=B0MUB3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE63372.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
L2_019_000M1_scaffold_399_16
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11413..11874)
-----------------
DNA (462bp)
protein (154aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MUB4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS03676.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
hypothetical protein
L2_019_000M1_scaffold_399_17
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12331..14124
-----------------
DNA (1794bp)
protein (598aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JMG2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE64846.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
L2_019_000M1_scaffold_399_18
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14267..14611
-----------------
DNA (345bp)
protein (115aa)
Uncharacterized protein n=2 Tax=root RepID=B0MUB5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS03677.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
L2_019_000M1_scaffold_399_19
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14868..15344
-----------------
DNA (477bp)
protein (159aa)
Uncharacterized protein n=2 Tax=root RepID=B0MUB5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS03677.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
L2_019_000M1_scaffold_399_20
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15419..18148)
-----------------
DNA (2730bp)
protein (910aa)
Pyruvate, phosphate dikinase {ECO:0000313|EMBL:EDS03679.1}; EC=2.7.9.1 {ECO:0000313|EMBL:EDS03679.1};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
pyruvate phosphate dikinase (EC:2.7.9.1)
Pyruvate, phosphate dikinase n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MUB6_9BACT
L2_019_000M1_scaffold_399_21
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18314..19129)
-----------------
DNA (816bp)
protein (272aa)
Uncharacterized protein n=2 Tax=root RepID=B0MUB8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS03680.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
hypothetical protein
L2_019_000M1_scaffold_399_22
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20231..21577)
-----------------
DNA (1347bp)
protein (449aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MTG4_9BACT
L2_019_000M1_scaffold_399_23
Tannerella sp. CAG:118, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21858..22442)
-----------------
DNA (585bp)
protein (195aa)
Uncharacterized protein n=1 Tax=Tannerella sp. CAG:118 RepID=R5IBI5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCY39420.1}; TaxID=1262978 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:118.;"
GNAT family acetyltransferase
L2_019_000M1_scaffold_399_24
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22536..23027)
-----------------
DNA (492bp)
protein (164aa)
Ribosome maturation factor RimM n=2 Tax=root RepID=B0MTG5_9BACT
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
16S rRNA processing protein RimM
L2_019_000M1_scaffold_399_25
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(23039..23593)
-----------------
DNA (555bp)
protein (185aa)
30S ribosomal protein S16 n=3 Tax=root RepID=B0MTG6_9BACT
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
30S ribosomal protein S16
L2_019_000M1_scaffold_399_26

Not on your lists

comp(23709..23969)
-----------------
DNA (261bp)
protein (87aa)
Uncharacterized protein n=5 Tax=root RepID=B0MTH0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKC61190.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_019_000M1_scaffold_399_27
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24437..26167)
-----------------
DNA (1731bp)
protein (577aa)
Peptidase, M23 family n=2 Tax=Alistipes RepID=B0MTH2_9BACT
Peptidase M23 family {ECO:0000313|EMBL:CDE64272.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
metalloendopeptidase-like membrane protein
L2_019_000M1_scaffold_399_28
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26152..26664)
-----------------
DNA (513bp)
protein (171aa)
Regulatory protein RecX n=2 Tax=Alistipes RepID=B0MTH3_9BACT
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein
L2_019_000M1_scaffold_399_29
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26643..27491)
-----------------
DNA (849bp)
protein (283aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
Release factor glutamine methyltransferase n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JL18_9BACT
protein-(glutamine-N5) methyltransferase
L2_019_000M1_scaffold_399_30
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27503..28753)
-----------------
DNA (1251bp)
protein (417aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|SAAS:SAAS00240549}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|SAAS:SAAS00240533};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=2 Tax=root RepID=R7JN09_9BACT
Displaying items 1-30 of 35 in total

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