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L2_019_061G1_scaffold_14

Search features with annotation key words

Displaying items 1-30 of 161 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_061G1_scaffold_14_1
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..90
DNA (90bp) protein (30aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZK81_BIFBR
transposase
Integrase core domain-containing protein {ECO:0000313|EMBL:EFV36343.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L2_019_061G1_scaffold_14_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(221..2215)
DNA (1995bp) protein (665aa)
Uncharacterized protein n=13 Tax=root RepID=Q8G785_BIFLO
Uncharacterized protein {ECO:0000313|EMBL:AAN24223.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
hypothetical protein
L2_019_061G1_scaffold_14_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2456..4696
DNA (2241bp) protein (747aa)
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase {ECO:0000256|HAMAP-Rule:MF_02124}; Short=GMPMT {ECO:0000256|HAMAP-Rule:MF_02124};; EC=2.4.99.16 {ECO:0000256|HAMAP-Rule:MF_02124};; (1->4)-alpha-D-glucan:maltose-1-phosphate alpha-D-maltosyltransferase {ECO:0000256|HAMAP-Rule:MF_02124}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase n=13 Tax=Bifidobacterium RepID=GLGE_BIFLO
glycosyl hydrolase
L2_019_061G1_scaffold_14_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4924..5418
DNA (495bp) protein (165aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
Inorganic pyrophosphatase n=16 Tax=Bifidobacterium RepID=D6DAD6_BIFLN
inorganic pyrophosphatase
L2_019_061G1_scaffold_14_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5700..6236
DNA (537bp) protein (179aa)
Putative manganese efflux pump MntP n=18 Tax=Bifidobacterium RepID=MNTP_BIFLD
hypothetical protein
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L2_019_061G1_scaffold_14_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6345..7049
DNA (705bp) protein (235aa)
Uncharacterized protein n=6 Tax=Bifidobacterium longum RepID=C2GT11_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEI81690.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L2_019_061G1_scaffold_14_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7210..8010
DNA (801bp) protein (267aa)
Response regulator receiver protein n=13 Tax=Bifidobacterium longum RepID=D6ZXV1_BIFLJ
response regulator receiver protein
Trancriptional regulator GlnR {ECO:0000313|EMBL:ESV32855.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
L2_019_061G1_scaffold_14_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8069..8755
DNA (687bp) protein (229aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
Endonuclease III n=16 Tax=Bifidobacterium RepID=B3DU21_BIFLD
endonuclease III
L2_019_061G1_scaffold_14_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8817..10343
DNA (1527bp) protein (509aa)
ABC-type dipeptide transport system, periplasmic component n=9 Tax=Bifidobacterium longum RepID=D6DAE1_BIFLN
ABC transporter substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEY23515.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_019_061G1_scaffold_14_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


10487..13222
DNA (2736bp) protein (912aa)
Valine--tRNA ligase {ECO:0000256|SAAS:SAAS00105779}; EC=6.1.1.9 {ECO:0000256|SAAS:SAAS00105779};; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
Valine--tRNA ligase n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5E8W4_BIFLI
valS; valyl-tRNA synthetase
L2_019_061G1_scaffold_14_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13580..15664)
DNA (2085bp) protein (695aa)
Uncharacterized protein n=3 Tax=Bifidobacterium longum subsp. longum RepID=T2I173_BIFLN
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ65909.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
hypothetical protein
L2_019_061G1_scaffold_14_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15786..16175)
DNA (390bp) protein (130aa)
Chorismate mutase n=18 Tax=Bifidobacterium RepID=B3DU25_BIFLD
chorismate mutase
Chorismate mutase {ECO:0000313|EMBL:ACD98644.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_019_061G1_scaffold_14_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16483..18552)
DNA (2070bp) protein (690aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
Transcription termination factor Rho n=15 Tax=Bifidobacterium RepID=B3DU26_BIFLD
transcription termination factor Rho
L2_019_061G1_scaffold_14_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18758..20371)
DNA (1614bp) protein (538aa)
Protoporphyrinogen oxidase n=18 Tax=Bifidobacterium RepID=B3DU27_BIFLD
Uncharacterized protein {ECO:0000313|EMBL:AIW43260.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
hypothetical protein
L2_019_061G1_scaffold_14_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20590..22458)
DNA (1869bp) protein (623aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MX60_BIFL1
Histidine acid phosphatase {ECO:0000313|EMBL:AIW43259.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
histidine acid phosphatase
L2_019_061G1_scaffold_14_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22617..22931)
DNA (315bp) protein (105aa)
Uncharacterized protein n=24 Tax=Bifidobacterium RepID=B3DU29_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK71152.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L2_019_061G1_scaffold_14_17
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22942..24006)
DNA (1065bp) protein (355aa)
Acetyltransferase n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XYW3_9BIFI
Acetyltransferase {ECO:0000313|EMBL:EFV37206.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
acetyltransferase
L2_019_061G1_scaffold_14_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24242..25741)
DNA (1500bp) protein (500aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00222465}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=18 Tax=Bifidobacterium RepID=GATB_BIFLD
aspartyl/glutamyl-tRNA amidotransferase subunit B
L2_019_061G1_scaffold_14_19
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25767..27308)
DNA (1542bp) protein (514aa)
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A (EC:6.3.5.- 6.3.5.7 6.3.5.6)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
Glutamyl-tRNA(Gln) amidotransferase subunit A n=14 Tax=Bifidobacterium RepID=GATA_BIFLD
L2_019_061G1_scaffold_14_20
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27312..27662)
DNA (351bp) protein (117aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5MUZ2_9BIFI
gatC; glutamyl-tRNA(Gln) amidotransferase subunit C
L2_019_061G1_scaffold_14_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27778..28626)
DNA (849bp) protein (283aa)
RNA methyltransferase, TrmH family n=8 Tax=Bifidobacterium RepID=C2GSZ3_BIFLN
hypothetical protein
RNA methyltransferase, TrmH domain protein {ECO:0000313|EMBL:EIJ30483.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L2_019_061G1_scaffold_14_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28720..29349)
DNA (630bp) protein (210aa)
Uncharacterized protein n=3 Tax=Bifidobacterium longum RepID=C2GSZ2_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK71157.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L2_019_061G1_scaffold_14_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29346..30770)
DNA (1425bp) protein (475aa)
RmuC domain protein n=7 Tax=Bifidobacterium RepID=I3AS81_BIFLN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ70354.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L2_019_061G1_scaffold_14_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30813..31094)
DNA (282bp) protein (94aa)
Uncharacterized protein n=18 Tax=Bifidobacterium RepID=B3DU37_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN24245.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L2_019_061G1_scaffold_14_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31206..33914
DNA (2709bp) protein (903aa)
Copper-transporting ATPase n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G762_BIFLO
silP; copper-transporting ATPase
ATPase {ECO:0000313|EMBL:KEY31815.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L2_019_061G1_scaffold_14_26
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33998..34732)
DNA (735bp) protein (245aa)
Glycerol uptake facilitator n=9 Tax=Bifidobacterium RepID=B3DU39_BIFLD
glycerol uptake facilitator protein
MIP family channel protein {ECO:0000313|EMBL:EFV37196.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L2_019_061G1_scaffold_14_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34966..36645)
DNA (1680bp) protein (560aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
Phosphoenolpyruvate-protein phosphotransferase n=15 Tax=Bacteria RepID=B3DU40_BIFLD
PTS system enzyme I
L2_019_061G1_scaffold_14_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36645..36905)
DNA (261bp) protein (87aa)
PTS system HPr component n=18 Tax=Bifidobacterium RepID=B3DU41_BIFLD
PTS galactitol transporter subunit IIC
PTS galactitol transporter subunit IIC {ECO:0000313|EMBL:KEY23534.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_019_061G1_scaffold_14_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(37292..37738)
DNA (447bp) protein (149aa)
50S ribosomal protein L9 n=17 Tax=Bifidobacterium RepID=RL9_BIFLD
50S ribosomal protein L9
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L2_019_061G1_scaffold_14_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(37758..38006)
DNA (249bp) protein (83aa)
30S ribosomal protein S18 n=21 Tax=Bifidobacterium RepID=RS18_BIFLO
30S ribosomal protein S18
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Displaying items 1-30 of 161 in total

View Taxonomy