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L2_019_061G1_scaffold_28

Search features with annotation key words

Displaying items 1-30 of 132 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_061G1_scaffold_28_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

461..1096
DNA (636bp) protein (212aa)
Translation initiation factor 3 n=13 Tax=Bifidobacterium RepID=B3DQT2_BIFLD
infC; infc
Translation initiation factor IF-3 {ECO:0000313|EMBL:KEY31456.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L2_019_061G1_scaffold_28_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


1077..1271
DNA (195bp) protein (65aa)
50S ribosomal protein L35 n=20 Tax=Bifidobacterium RepID=RL35_BIFLD
50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_019_061G1_scaffold_28_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


1324..1707
DNA (384bp) protein (128aa)
50S ribosomal protein L20 n=14 Tax=Bifidobacterium RepID=RL20_BIFLD
rplT; 50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L2_019_061G1_scaffold_28_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1768..2703
DNA (936bp) protein (312aa)
Tyrosine recombinase XerD n=14 Tax=Bifidobacterium RepID=D6DCV1_BIFLN
integrase/recombinase
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L2_019_061G1_scaffold_28_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2831..5677
DNA (2847bp) protein (949aa)
Efflux ABC transporter, permease protein n=1 Tax=Bifidobacterium longum subsp. longum 44B RepID=I3BH95_BIFLN
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EIJ30738.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
hypothetical protein
L2_019_061G1_scaffold_28_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5879..6778
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G4K9_BIFLO
hypothetical protein
CobQ/CobB/MinD/ParA nucleotide binding domain protein {ECO:0000313|EMBL:EEI79760.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L2_019_061G1_scaffold_28_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6797..7711
DNA (915bp) protein (305aa)
Condensin subunit ScpA n=12 Tax=Bifidobacterium RepID=D6DCV4_BIFLN
hypothetical protein
Condensin subunit ScpA {ECO:0000313|EMBL:CBK70325.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L2_019_061G1_scaffold_28_8
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7724..8440
DNA (717bp) protein (239aa)
Segregation and condensation protein ScpB n=15 Tax=Bifidobacterium RepID=V6XX05_BIFLN
putative transcriptional regulator
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L2_019_061G1_scaffold_28_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8572..9399
DNA (828bp) protein (276aa)
Hydrolase, NUDIX family n=6 Tax=Bifidobacterium longum RepID=C5EC01_BIFLI
hypothetical protein
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:KEY31448.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L2_019_061G1_scaffold_28_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9459..10739
DNA (1281bp) protein (427aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00569}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00569};; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
Quinolinate synthase A n=15 Tax=Bifidobacterium RepID=E4R2A4_BIFLM
quinolinate synthase
L2_019_061G1_scaffold_28_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10831..12462
DNA (1632bp) protein (544aa)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L-aspartate oxidase n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8APL0_BIFLN
L-aspartate oxidase
L2_019_061G1_scaffold_28_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12466..13359
DNA (894bp) protein (298aa)
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
Nicotinate-nucleotide pyrophosphorylase n=11 Tax=Bifidobacterium RepID=B3DQU3_BIFLD
Nicotinate-nucleotide pyrophosphorylase {ECO:0000313|EMBL:KEY25574.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_019_061G1_scaffold_28_13
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13362..14609
DNA (1248bp) protein (416aa)
Cysteine sulfinate desulfinase/cysteine desulfurase n=13 Tax=Bifidobacterium RepID=B3DQU4_BIFLD
pyridoxal-phosphate-dependent aminotransferase
Putative pyridoxal-phosphate-dependent aminotransferase {ECO:0000313|EMBL:CCY95676.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L2_019_061G1_scaffold_28_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14641..15990
DNA (1350bp) protein (450aa)
Sugar transport protein n=15 Tax=Bifidobacterium RepID=F8APL3_BIFLN
sugar transport protein
Transporter, major facilitator family protein {ECO:0000313|EMBL:EIJ26957.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_019_061G1_scaffold_28_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16305..18236
DNA (1932bp) protein (644aa)
GTP-binding protein TypA/BipA n=12 Tax=Bifidobacterium RepID=D6DCW1_BIFLN
Widely conserved protein similar to those annotated as GTP-binding elongation factor TypA/BipA {ECO:0000313|EMBL:AAN25180.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
GTP-binding protein
L2_019_061G1_scaffold_28_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18336..18782
DNA (447bp) protein (149aa)
Uncharacterized protein n=12 Tax=Bifidobacterium RepID=B3DQU7_BIFLD
alcohol dehydrogenase
Uncharacterized protein {ECO:0000313|EMBL:ACD97693.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_019_061G1_scaffold_28_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18871..19839
DNA (969bp) protein (323aa)
Prephenate dehydratase n=14 Tax=Bifidobacterium RepID=B3DQU8_BIFLD
chorismate mutase
Prephenate dehydratase {ECO:0000313|EMBL:ACD97694.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_019_061G1_scaffold_28_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19833..20900
DNA (1068bp) protein (356aa)
Prephenate dehydrogenase {ECO:0000313|EMBL:ESV33772.1}; EC=1.3.1.43 {ECO:0000313|EMBL:ESV33772.1};; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
Prephenate dehydrogenase n=1 Tax=Bifidobacterium longum E18 RepID=V6XWZ5_BIFLN
pdhA; pdha
L2_019_061G1_scaffold_28_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21110..21367
DNA (258bp) protein (86aa)
Uncharacterized protein n=20 Tax=Bifidobacterium RepID=B3DQV0_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD97696.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_019_061G1_scaffold_28_20
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21402..22469
DNA (1068bp) protein (356aa)
Tyrosine recombinase XerC n=4 Tax=Bifidobacterium RepID=XERC_BIFLD
xerC; site-specific tyrosine recombinase XerC
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L2_019_061G1_scaffold_28_21
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22722..24362
DNA (1641bp) protein (547aa)
Dipeptide ABC transporter substrate binding component n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5MW51_9BIFI
Dipeptide ABC transporter substrate binding component {ECO:0000313|EMBL:CCY95668.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
dipeptide ABC transporter substrate-binding protein
L2_019_061G1_scaffold_28_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24663..25589
DNA (927bp) protein (309aa)
ABC-type dipeptide/oligopeptide/nickel transport systems permease component n=9 Tax=Bifidobacterium RepID=B3DQV3_BIFLD
dppB; peptide ABC transporter permease
ABC-type dipeptide/oligopeptide/nickel transport systems permease component {ECO:0000313|EMBL:ACD97699.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_019_061G1_scaffold_28_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25608..26612
DNA (1005bp) protein (335aa)
Dipeptide ABC transporter permease component n=10 Tax=Bifidobacterium RepID=E8MJC9_BIFL2
dipeptide ABC transporter permease
Peptide ABC transporter permease {ECO:0000313|EMBL:KEY25563.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_019_061G1_scaffold_28_24
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26635..28644
DNA (2010bp) protein (670aa)
ATPase components of various ABC-type transport systems, contain duplicated ATPase n=5 Tax=Bifidobacterium RepID=D6DCW8_BIFLN
appF2; appf2
ABC transporter {ECO:0000313|EMBL:EFV37446.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L2_019_061G1_scaffold_28_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28954..29814)
DNA (861bp) protein (287aa)
Exodeoxyribonuclease III Xth n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GQE6_BIFLS
exodeoxyribonuclease III Xth
Exodeoxyribonuclease III Xth {ECO:0000313|EMBL:BAP83778.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L2_019_061G1_scaffold_28_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29939..30793
DNA (855bp) protein (285aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=C5EC19_BIFLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEY31431.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L2_019_061G1_scaffold_28_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30809..31567
DNA (759bp) protein (253aa)
Uncharacterized protein n=5 Tax=Bifidobacterium longum subsp. longum RepID=C2GYF7_BIFLN
PF11361 family protein {ECO:0000313|EMBL:EIJ30762.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
hypothetical protein
L2_019_061G1_scaffold_28_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31557..32825
DNA (1269bp) protein (423aa)
TRAM domain protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GYF8_BIFLN
methyltransferase
TRAM domain protein {ECO:0000313|EMBL:EEI79783.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L2_019_061G1_scaffold_28_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32870..33532
DNA (663bp) protein (221aa)
Uncharacterized protein n=9 Tax=Bifidobacterium longum RepID=Q8G4I7_BIFLO
Uncharacterized protein {ECO:0000313|EMBL:KFI73360.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L2_019_061G1_scaffold_28_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33623..36211
DNA (2589bp) protein (863aa)
Cation-transporting ATPase n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8APM9_BIFLN
Haloacid dehalogenase {ECO:0000313|EMBL:KEY31427.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
cation-transporting ATPase
Displaying items 1-30 of 132 in total

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