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L2_019_061G1_scaffold_122

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_061G1_scaffold_122_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..495)
DNA (495bp) protein (165aa)
Adhesin isopeptide-forming adherence domain protein n=2 Tax=Bifidobacterium longum subsp. longum 35B RepID=I3ARJ6_BIFLN
Adhesin {ECO:0000313|EMBL:KEY31329.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
hypothetical protein
L2_019_061G1_scaffold_122_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(443..1264)
DNA (822bp) protein (274aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GXK1_BIFLN
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:EEI80036.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
adhesin
L2_019_061G1_scaffold_122_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1603..2595)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GXK0_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EEI80035.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
hypothetical protein
L2_019_061G1_scaffold_122_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2623..3534)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum 1-6B RepID=I3AX43_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEI80034.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L2_019_061G1_scaffold_122_5
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3563..3793)
DNA (231bp) protein (77aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=B3DRR1_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFV37108.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L2_019_061G1_scaffold_122_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3793..4047)
DNA (255bp) protein (85aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8AQ29_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI97423.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L2_019_061G1_scaffold_122_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4125..4718)
DNA (594bp) protein (198aa)
ATPase for chromosome partitioning n=7 Tax=Bifidobacterium RepID=B3DRR3_BIFLD
ATPases involved in chromosome partitioning
ATPase for chromosome partitioning {ECO:0000313|EMBL:ACD97832.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_019_061G1_scaffold_122_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4854..5330)
DNA (477bp) protein (159aa)
Transcriptional regulator WhiB n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GXJ5_BIFLN
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Transcription factor WhiB.
L2_019_061G1_scaffold_122_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5321..6691)
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DRR5_BIFLD
DNA-binding protein
DNA-binding protein {ECO:0000313|EMBL:AIW44731.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_019_061G1_scaffold_122_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6688..6888)
DNA (201bp) protein (67aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=C5ECD8_BIFLI
Uncharacterized protein {ECO:0000313|EMBL:KHD94815.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
hypothetical protein
L2_019_061G1_scaffold_122_11
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6875..7039)
DNA (165bp) protein (55aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=I3AWZ1_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EFV37114.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
hypothetical protein
L2_019_061G1_scaffold_122_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7036..7185)
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5ECE0_BIFLI
Uncharacterized protein {ECO:0000313|EMBL:EEQ55684.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
hypothetical protein
L2_019_061G1_scaffold_122_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7170..7553)
DNA (384bp) protein (128aa)
Uncharacterized protein n=4 Tax=Bifidobacterium longum RepID=C5ECE1_BIFLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHD94814.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
L2_019_061G1_scaffold_122_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7550..7891)
DNA (342bp) protein (114aa)
Uncharacterized protein n=4 Tax=Bifidobacterium longum RepID=B3DRS0_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI97430.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L2_019_061G1_scaffold_122_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8020..8229)
DNA (210bp) protein (70aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW44726.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_019_061G1_scaffold_122_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8367..8765
DNA (399bp) protein (133aa)
Plasmid maintenance system antidote protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I3I8_BIFLN
Plasmid maintenance system antidote protein {ECO:0000313|EMBL:CCK35071.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
vapI; plasmid maintenance system antidote protein
L2_019_061G1_scaffold_122_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9194..9883
DNA (690bp) protein (230aa)
Pitative peptidase n=10 Tax=Bifidobacterium RepID=V6XYY1_BIFLN
hypothetical protein
Peptidase, M23 family {ECO:0000313|EMBL:EEI80168.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L2_019_061G1_scaffold_122_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9961..11592)
DNA (1632bp) protein (544aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R2S4_BIFLM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD97843.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_019_061G1_scaffold_122_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11841..13061)
DNA (1221bp) protein (407aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108, ECO:0000313|EMBL:CBK70449.1};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Isocitrate dehydrogenase [NADP] n=9 Tax=Bifidobacterium longum RepID=B3DRS5_BIFLD
icd; icd
L2_019_061G1_scaffold_122_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13189..14313
DNA (1125bp) protein (375aa)
IMP dehydrogenase family protein n=17 Tax=Bacteria RepID=D6ZUK8_BIFLJ
inositol-5-monophosphate dehydrogenase
IMP dehydrogenase family protein {ECO:0000313|EMBL:EEI80165.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L2_019_061G1_scaffold_122_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14475..14966
DNA (492bp) protein (164aa)
Uncharacterized protein n=12 Tax=Bifidobacterium RepID=B3DRS7_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD97846.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_019_061G1_scaffold_122_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15057..17153
DNA (2097bp) protein (699aa)
Long-chain-fatty-acid--CoA ligase n=2 Tax=Bifidobacterium longum RepID=S3DNX7_BIFLN
Putative long-chain-fatty acid CoA ligase {ECO:0000313|EMBL:BAJ66801.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
long-chain-fatty acid CoA ligase
L2_019_061G1_scaffold_122_23
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17160..17648
DNA (489bp) protein (163aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
Peptide deformylase 2 n=18 Tax=Bifidobacterium RepID=DEF2_BIFLO
polypeptide deformylase
L2_019_061G1_scaffold_122_24
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


18005..18850
DNA (846bp) protein (282aa)
30S ribosomal protein S2 n=16 Tax=Bifidobacterium RepID=RS2_BIFLD
30S ribosomal protein S2
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L2_019_061G1_scaffold_122_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18929..19780
DNA (852bp) protein (284aa)
Elongation factor Ts n=19 Tax=Bifidobacterium RepID=EFTS_BIFLD
elongation factor Ts
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_019_061G1_scaffold_122_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19954..20694
DNA (741bp) protein (247aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
Uridylate kinase n=18 Tax=Bifidobacterium RepID=PYRH_BIFLO
uridylate kinase
L2_019_061G1_scaffold_122_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20771..21322
DNA (552bp) protein (184aa)
Ribosome-recycling factor n=16 Tax=Bifidobacterium RepID=RRF_BIFLD
ribosome recycling factor
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L2_019_061G1_scaffold_122_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21345..22331
DNA (987bp) protein (329aa)
CDP-diglyceride synthetase (EC:2.7.7.41)
CDP-diglyceride synthetase n=11 Tax=Bifidobacterium RepID=D6DD85_BIFLN
Putative phosphatidate cytidylyltransferase {ECO:0000313|EMBL:BAJ66795.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L2_019_061G1_scaffold_122_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22542..23711
DNA (1170bp) protein (390aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
Radical SAM enzyme, Cfr family n=4 Tax=Bifidobacterium longum RepID=V6Y1G1_BIFLN
ribosomal RNA large subunit methyltransferase N
L2_019_061G1_scaffold_122_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23712..24260)
DNA (549bp) protein (183aa)
Intracellular protease, PfpI family protein {ECO:0000313|EMBL:CCK35057.1}; EC=3.2.-.- {ECO:0000313|EMBL:CCK35057.1};; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
Intracellular protease, PfpI family n=2 Tax=Bifidobacterium longum subsp. longum RepID=C2GXH6_BIFLN
protease
Displaying items 1-30 of 61 in total

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