ggKbase home page

L2_019_061G1_scaffold_204

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_061G1_scaffold_204_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..114
DNA (114bp) protein (38aa)
Uncharacterized protein n=3 Tax=Escherichia fergusonii RepID=B7LJP7_ESCF3
yphA; hypothetical protein
Membrane protein {ECO:0000313|EMBL:EYV14234.1}; TaxID=1446560 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O121:H19 str. 2010C-3609.;"
L2_019_061G1_scaffold_204_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(274..1146)
DNA (873bp) protein (291aa)
Aldose 1-epimerase n=6 Tax=Escherichia coli RepID=T6H768_ECOLX
Aldose 1-epimerase {ECO:0000313|EMBL:EQP49894.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
yphB; hypothetical protein
L2_019_061G1_scaffold_204_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1158..2219)
DNA (1062bp) protein (354aa)
GroES-like protein n=30 Tax=Escherichia coli RepID=I2ZJ51_ECOLX
Oxidoreductase, Zn-dependent and NAD(P)-binding {ECO:0000313|EMBL:EQP49895.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
alcohol dehydrogenase
L2_019_061G1_scaffold_204_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2285..3283)
DNA (999bp) protein (333aa)
Sugar ABC transporter membrane protein n=10 Tax=Escherichia coli RepID=L3JS31_ECOLX
Sugar ABC transporter membrane protein {ECO:0000313|EMBL:EQP49896.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
putative sugar ABC transporter permease
L2_019_061G1_scaffold_204_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3308..4819)
DNA (1512bp) protein (504aa)
Fused predicted sugar transporter subunits of ABC superfamily: ATP-binding components n=75 Tax=Escherichia coli RepID=B7UGY7_ECO27
ABC transporter ATP-binding protein
ABC transporter family protein {ECO:0000313|EMBL:EHU38012.1}; TaxID=868139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2B.;"
L2_019_061G1_scaffold_204_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4842..5825)
DNA (984bp) protein (328aa)
ABC transporter periplasmic-binding protein yphF n=57 Tax=Escherichia coli RepID=E7JN66_ECOLX
yphF; putative ABC transport system, periplasmic binding protein
Putative transcriptional regulator {ECO:0000313|EMBL:BAI55926.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
L2_019_061G1_scaffold_204_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5922..9203)
DNA (3282bp) protein (1094aa)
Uncharacterized protein yphG n=10 Tax=Escherichia coli RepID=E2QQ09_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EQP49899.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
hypothetical protein
L2_019_061G1_scaffold_204_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9321..10514
DNA (1194bp) protein (398aa)
Transcriptional regulator n=6 Tax=Escherichia coli RepID=T6HLZ9_ECOLX
Transcriptional regulator {ECO:0000313|EMBL:EQP49900.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
mlc_3; Making large colonies protein
L2_019_061G1_scaffold_204_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10578..11831)
DNA (1254bp) protein (418aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=475609 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli chi7122.;"
Serine hydroxymethyltransferase n=1029 Tax=Enterobacteriaceae RepID=GLYA_ECO24
glyA; serine hydroxymethyltransferase
L2_019_061G1_scaffold_204_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12159..13349
DNA (1191bp) protein (397aa)
Flavohemoprotein n=328 Tax=Escherichia RepID=HMP_ECO57
hmp; nitric oxide dioxygenase
Flavohemoprotein {ECO:0000256|HAMAP-Rule:MF_01252}; Flavohemoglobin {ECO:0000256|HAMAP-Rule:MF_01252}; Hemoglobin-like protein {ECO:0000256|HAMAP-Rule:MF_01252}; Nitric oxide dioxygenase {ECO:0000256|HAMAP-Rule:MF_01252}; TaxID=741093 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli Xuzhou21.;"
L2_019_061G1_scaffold_204_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13394..13732)
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II 1 n=1938 Tax=Enterobacteriaceae RepID=GLNB_ECO57
nitrogen regulatory protein P-II 1
Nitrogen regulatory protein P-II 1 {ECO:0000313|EMBL:ENA06885.1}; TaxID=1116047 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0299917.1.;"
L2_019_061G1_scaffold_204_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13793..15127)
DNA (1335bp) protein (445aa)
Two-component response regulator n=531 Tax=Escherichia RepID=D2NLA9_ECOS5
putative DNA-binding response regulator in two-component system
AAA domain family protein {ECO:0000313|EMBL:EMV57208.1}; TaxID=1116032 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2871950.;"
L2_019_061G1_scaffold_204_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15117..15830)
DNA (714bp) protein (238aa)
Uncharacterized protein yfhG n=270 Tax=Escherichia RepID=E2QQ15_ECOLX
qseG; Quorum-sensing regulator protein G precursor
Uncharacterized protein {ECO:0000313|EMBL:EOW96604.1}; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE182.;"
L2_019_061G1_scaffold_204_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15995..17377)
DNA (1383bp) protein (461aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=656419 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M718.;"
Hsp90-like protein n=4 Tax=Escherichia coli RepID=E9VGF7_ECOLX
glrK; putative 2-component sensor protein
L2_019_061G1_scaffold_204_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17998..19128)
DNA (1131bp) protein (377aa)
purL; phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase {ECO:0000255|HAMAP-Rule:MF_00419}; Short=FGAM synthase {ECO:0000255|HAMAP-Rule:MF_00419};; Short=FGAMS {ECO:0000255|HAMAP-Rule:MF_00419};; EC=6.3.5.3 {ECO:0000255|HAMAP-Rule:MF_00419};; Formylglycinamide ribonucleotide amidotransferase {ECO:0000255|HAMAP-Rule:MF_00419}; Short=FGAR amidotransferase {ECO:0000255|HAMAP-Rule:MF_00419};; Short=FGAR-AT {ECO:0000255|HAMAP-Rule:MF_00419};; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
phosphoribosylformylglycinamidine synthase n=1 Tax=Escherichia coli RepID=UPI0003666A50
L2_019_061G1_scaffold_204_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19082..21727)
DNA (2646bp) protein (882aa)
Phosphoribosylformylglycinamidine synthase {ECO:0000256|HAMAP-Rule:MF_00419, ECO:0000256|SAAS:SAAS00064474}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00419};; Short=FGAMS {ECO:0000256|HAMAP-Rule:MF_00419};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00419, ECO:0000256|SAAS:SAAS00064474};; Formylglycinamide ribonucleotide amidotransferase {ECO:0000256|HAMAP-Rule:MF_00419}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
purL; Phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase n=6 Tax=Escherichia coli RepID=T7MG58_ECOLX
L2_019_061G1_scaffold_204_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21987..23543
DNA (1557bp) protein (519aa)
Membrane-bound lytic murein transglycosylase F {ECO:0000256|HAMAP-Rule:MF_02016, ECO:0000256|SAAS:SAAS00176609}; EC=4.2.2.n1 {ECO:0000256|HAMAP-Rule:MF_02016, ECO:0000256|SAAS:SAAS00166192};; Murein lyase F {ECO:0000256|HAMAP-Rule:MF_02016}; Flags: Precursor;; TaxID=670897 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2362-75.;"
Membrane-bound lytic murein transglycosylase F n=310 Tax=Enterobacteriaceae RepID=MLTF_ECO24
yfhD; putative transglycosylase
L2_019_061G1_scaffold_204_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23540..24043)
DNA (504bp) protein (168aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1182698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE98.;"
tRNA-specific adenosine deaminase n=572 Tax=Enterobacteriaceae RepID=TADA_ECO57
tadA; tRNA-specific adenosine deaminase
L2_019_061G1_scaffold_204_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24101..24736)
DNA (636bp) protein (212aa)
Uncharacterized protein yfhB n=343 Tax=Enterobacteriaceae RepID=E2QQ20_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETE23794.1}; TaxID=1417796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli LAU-EC10.;"
L2_019_061G1_scaffold_204_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24945..25793
DNA (849bp) protein (283aa)
Uncharacterized HTH-type transcriptional regulator n=133 Tax=Enterobacteriaceae RepID=E2QQ21_ECOLX
DNA-binding transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:EQX26404.1}; TaxID=1281200 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UMEA 3162-1).;"
L2_019_061G1_scaffold_204_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25849..26109
DNA (261bp) protein (87aa)
Uncharacterized ferredoxin-like protein yfhL n=321 Tax=Escherichia RepID=E2QQ22_ECOLX
ferredoxin (4Fe-4S cluster-containing protein) (fdx-like)
4Fe-4S binding domain protein {ECO:0000313|EMBL:EHU08343.1}; TaxID=868133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1A.;"
L2_019_061G1_scaffold_204_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26804..27184)
DNA (381bp) protein (127aa)
acpS; 4'-phosphopantetheinyl transferase (EC:2.7.8.7)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237208}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
Holo-[acyl-carrier-protein] synthase n=378 Tax=Escherichia RepID=ACPS_ECO27
L2_019_061G1_scaffold_204_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27184..27915)
DNA (732bp) protein (244aa)
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088588};; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
Pyridoxine 5'-phosphate synthase n=195 Tax=Escherichia RepID=E2QQ24_ECOLX
pdxJ; pyridoxine 5'-phosphate synthase
L2_019_061G1_scaffold_204_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27927..28655)
DNA (729bp) protein (243aa)
DNA repair protein RecO n=768 Tax=Bacteria RepID=RECO_ECO45
DNA repair protein RecO
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=679205 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 124-1.;"
L2_019_061G1_scaffold_204_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28667..29572)
DNA (906bp) protein (302aa)
GTPase Era n=871 Tax=Enterobacteriaceae RepID=ERA_ECO24
GTP-binding protein Era
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1444219 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S4_C1.;"
L2_019_061G1_scaffold_204_26
Escherichia sp. KTE114, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29569..30249)
DNA (681bp) protein (227aa)
rnc; ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=1169321 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE114.;"
Ribonuclease 3 n=1213 Tax=Enterobacteriaceae RepID=RNC_ECO24
L2_019_061G1_scaffold_204_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30516..31490)
DNA (975bp) protein (325aa)
lepB; signal peptidase I (EC:3.4.21.89)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=656429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TA007.;"
Signal peptidase I n=1188 Tax=Enterobacteriaceae RepID=C3SZ57_ECOLX
L2_019_061G1_scaffold_204_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31506..33305)
DNA (1800bp) protein (600aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Elongation factor 4 n=204 Tax=Escherichia RepID=LEPA_ECO27
lepA; GTP-binding protein LepA
L2_019_061G1_scaffold_204_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33503..33982)
DNA (480bp) protein (160aa)
Sigma-E factor regulatory protein rseC n=6 Tax=Escherichia coli RepID=T6HM16_ECOLX
Sigma-E factor regulatory protein rseC {ECO:0000313|EMBL:EQP49920.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
rseC; sigma-E factor regulatory protein RseC
L2_019_061G1_scaffold_204_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33979..34935)
DNA (957bp) protein (319aa)
Sigma-E factor regulatory protein rseB n=58 Tax=Escherichia RepID=E2QQ31_ECOLX
rseB; periplasmic negative regulator of sigmaE
Sigma-E factor regulatory protein rseB {ECO:0000313|EMBL:EZJ38255.1}; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
Displaying items 1-30 of 52 in total

View Taxonomy