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L2_019_061G1_scaffold_213

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Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_061G1_scaffold_213_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..173)
DNA (171bp) protein (57aa)
Hcp1 family type VI secretion system effector n=1 Tax=Escherichia coli KTE75 RepID=L3Q1L5_ECOLX
Secreted protein Hcp
Hcp family T6SS protein CtsH1 {ECO:0000313|EMBL:KIH07073.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L2_019_061G1_scaffold_213_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(231..809)
DNA (579bp) protein (193aa)
Outer membrane protein OmpA n=1 Tax=Escherichia coli KTE240 RepID=S1QAU4_ECOLX
yiaD_1; Inner membrane lipoprotein YiaD precursor
DwoE {ECO:0000313|EMBL:AHW84676.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L2_019_061G1_scaffold_213_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(767..1726)
DNA (960bp) protein (320aa)
Outer membrane protein OmpA n=2 Tax=Escherichia coli RepID=L3N751_ECOLX
OmpA domain-containing protein
OmpA family membrane protein {ECO:0000313|EMBL:CKH13455.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L2_019_061G1_scaffold_213_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1739..2404)
DNA (666bp) protein (222aa)
Uncharacterized protein n=5 Tax=Escherichia coli RepID=T6H0K1_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EQP47067.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
hypothetical protein
L2_019_061G1_scaffold_213_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2401..3738)
DNA (1338bp) protein (446aa)
Uncharacterized protein n=133 Tax=Escherichia RepID=B7MLD7_ECO45
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAR04326.1}; TaxID=585035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O45:K1 (strain S88 / ExPEC).;"
L2_019_061G1_scaffold_213_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3756..5294)
DNA (1539bp) protein (513aa)
EvpB/family type VI secretion protein n=3 Tax=Escherichia coli RepID=T6HDY4_ECOLX
EvpB/family type VI secretion protein {ECO:0000313|EMBL:EQP47065.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
hypothetical protein
L2_019_061G1_scaffold_213_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5353..5853)
DNA (501bp) protein (167aa)
Type VI secretion protein n=6 Tax=Escherichia coli RepID=T6GZ73_ECOLX
Type VI secretion protein {ECO:0000313|EMBL:EQP47064.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
hypothetical protein
L2_019_061G1_scaffold_213_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6990..8087
DNA (1098bp) protein (366aa)
mltA; murein transglycosylase A (EC:3.2.1.-)
Membrane-bound lytic murein transglycosylase A n=1 Tax=Escherichia coli (strain UTI89 / UPEC) RepID=Q1R7M6_ECOUT
Membrane-bound lytic murein transglycosylase A {ECO:0000313|EMBL:CDN83418.1}; MltA protein; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
L2_019_061G1_scaffold_213_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8164..8970
DNA (807bp) protein (269aa)
Uncharacterized protein ygdL n=216 Tax=Escherichia RepID=E2QQQ8_ECOLX
ygdL; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAS10627.1}; TaxID=574521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O127:H6 (strain E2348/69 / EPEC).;"
L2_019_061G1_scaffold_213_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9021..9464)
DNA (444bp) protein (148aa)
Uncharacterized protein n=331 Tax=Escherichia RepID=D2NLW8_ECOS5
ygdK; Fe-S metabolism protein (sufE-like)
Uncharacterized protein {ECO:0000313|EMBL:BAI56142.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
L2_019_061G1_scaffold_213_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9464..10669)
DNA (1206bp) protein (402aa)
Cysteine desulfurase, catalytic subunit CsdA {ECO:0000313|EMBL:EHU52568.1}; EC=2.8.1.7 {ECO:0000313|EMBL:EHU52568.1};; TaxID=868142 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2E.;"
Cysteine desulfurase, catalytic subunit CsdA n=23 Tax=Escherichia coli RepID=E3XIC5_ECOLX
csdA; cysteine sulfinate desulfinase
L2_019_061G1_scaffold_213_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10861..11088
DNA (228bp) protein (76aa)
Uncharacterized protein n=116 Tax=Enterobacteriaceae RepID=D2NLW6_ECOS5
ygdI; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMX83064.1}; TaxID=1116119 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2719100.;"
L2_019_061G1_scaffold_213_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11439..12356
DNA (918bp) protein (306aa)
Glycine cleavage system transcriptional activator n=1321 Tax=Enterobacteriaceae RepID=GCVA_ECO57
gcvA; positive regulator of gcv operon
LysR family transcriptional regulator {ECO:0000313|EMBL:EFE61653.2}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
L2_019_061G1_scaffold_213_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12375..12770
DNA (396bp) protein (132aa)
UPF0382 inner membrane protein YgdD n=1299 Tax=Enterobacteriaceae RepID=YGDD_ECO57
ygdD; hypothetical protein
Conserved predicted inner membrane protein {ECO:0000313|EMBL:CAS10622.1}; TaxID=574521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O127:H6 (strain E2348/69 / EPEC).;"
L2_019_061G1_scaffold_213_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12763..13863
DNA (1101bp) protein (367aa)
Ribosomal RNA large subunit methyltransferase M {ECO:0000256|HAMAP-Rule:MF_01551, ECO:0000256|SAAS:SAAS00058276}; EC=2.1.1.186 {ECO:0000256|HAMAP-Rule:MF_01551, ECO:0000256|SAAS:SAAS00058274};; 23S rRNA (cytidine2498-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01551}; 23S rRNA 2'-O-ribose methyltransferase RlmM {ECO:0000256|HAMAP-Rule:MF_01551}; TaxID=868136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1D.;"
Ribosomal RNA large subunit methyltransferase M n=198 Tax=Escherichia coli RepID=RLMM_ECO27
ygdE; putative RNA 2'-O-ribose methyltransferase
L2_019_061G1_scaffold_213_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13907..14638)
DNA (732bp) protein (244aa)
DNA-binding transcriptional activator FucR n=5 Tax=Escherichia RepID=G7R6N4_ECOC2
fucR; DNA-binding transcriptional activator FucR
Bacterial regulatory s, gntR family protein {ECO:0000313|EMBL:EHU23754.1}; TaxID=868137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1E.;"
L2_019_061G1_scaffold_213_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14696..15118)
DNA (423bp) protein (141aa)
L-fucose mutarotase {ECO:0000256|HAMAP-Rule:MF_01662, ECO:0000256|SAAS:SAAS00010479}; EC=5.1.3.29 {ECO:0000256|HAMAP-Rule:MF_01662, ECO:0000256|SAAS:SAAS00148242};; Fucose 1-epimerase {ECO:0000256|HAMAP-Rule:MF_01662}; Type-2 mutarotase {ECO:0000256|HAMAP-Rule:MF_01662}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L-fucose mutarotase n=8 Tax=Escherichia coli RepID=E2QQQ0_ECOLX
L-fucose mutarotase
L2_019_061G1_scaffold_213_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15120..16538)
DNA (1419bp) protein (473aa)
L-fuculokinase {ECO:0000256|HAMAP-Rule:MF_00986}; EC=2.7.1.51 {ECO:0000256|HAMAP-Rule:MF_00986};; L-fuculose kinase {ECO:0000256|HAMAP-Rule:MF_00986}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L-fuculokinase n=15 Tax=Escherichia coli RepID=E2QQP9_ECOLX
L-fuculokinase
L2_019_061G1_scaffold_213_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16647..18422)
DNA (1776bp) protein (592aa)
L-fucose isomerase {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040911}; Short=FucIase {ECO:0000256|HAMAP-Rule:MF_01254};; EC=5.3.1.25 {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040955};; 6-deoxy-L-galactose isomerase {ECO:0000256|HAMAP-Rule:MF_01254}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
fucI; L-fucose isomerase (EC:5.3.1.25)
L-fucose isomerase n=7 Tax=Escherichia coli RepID=I4S1C9_ECOLX
L2_019_061G1_scaffold_213_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18455..19771)
DNA (1317bp) protein (439aa)
L-fucose-proton symporter n=283 Tax=Escherichia RepID=E2QQP7_ECOLX
fucP; L-fucose transporter
L-fucose transporter {ECO:0000313|EMBL:EMD09211.1}; TaxID=1196033 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli SEPT362.;"
L2_019_061G1_scaffold_213_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20318..20965
DNA (648bp) protein (216aa)
L-fuculose phosphate aldolase (EC:4.1.2.17)
L-fuculose phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00987}; EC=4.1.2.17 {ECO:0000256|HAMAP-Rule:MF_00987};; L-fuculose-1-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00987}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L-fuculose phosphate aldolase n=391 Tax=Escherichia RepID=FUCA_ECOL6
L2_019_061G1_scaffold_213_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20993..22141
DNA (1149bp) protein (383aa)
Lactaldehyde reductase n=167 Tax=Escherichia coli RepID=E2QQP5_ECOLX
fucO; L-1,2-propanediol oxidoreductase
Lactaldehyde reductase {ECO:0000313|EMBL:EQP47602.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L2_019_061G1_scaffold_213_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22246..23091)
DNA (846bp) protein (282aa)
Flap endonuclease Xni {ECO:0000256|HAMAP-Rule:MF_01192, ECO:0000256|SAAS:SAAS00008260}; Short=FEN {ECO:0000256|HAMAP-Rule:MF_01192};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01192, ECO:0000256|SAAS:SAAS00273675};; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
Flap endonuclease Xni n=36 Tax=Escherichia coli RepID=E2QQP4_ECOLX
xni; exonuclease IX
L2_019_061G1_scaffold_213_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23113..24480)
DNA (1368bp) protein (456aa)
L-serine ammonia-lyase {ECO:0000313|EMBL:EII24605.1}; EC=4.3.1.17 {ECO:0000313|EMBL:EII24605.1};; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
L-serine dehydratase 2 n=573 Tax=Enterobacteriaceae RepID=E2QQP3_ECOLX
sdaB; L-serine deaminase II
L2_019_061G1_scaffold_213_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24538..25827)
DNA (1290bp) protein (430aa)
Serine transporter n=398 Tax=Escherichia RepID=E2QQP2_ECOLX
sdaC; serine transporter
Serine transporter {ECO:0000313|EMBL:EFR18370.1}; TaxID=670897 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2362-75.;"
L2_019_061G1_scaffold_213_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26384..27748)
DNA (1365bp) protein (455aa)
LOG family protein YgdH n=1259 Tax=Enterobacteriaceae RepID=YGDH_ECO57
ygdH; rossmann fold nucleotide-binding protein
Putative nucleotide binding protein {ECO:0000313|EMBL:EGI44926.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;"
L2_019_061G1_scaffold_213_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27860..28708)
DNA (849bp) protein (283aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00817, ECO:0000256|SAAS:SAAS00037296}; EC=1.7.1.13 {ECO:0000256|HAMAP-Rule:MF_00817, ECO:0000256|SAAS:SAAS00001352};; 7-cyano-7-carbaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00817}; NADPH-dependent nitrile oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00817}; PreQ(0) reductase {ECO:0000256|HAMAP-Rule:MF_00817}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
NADPH-dependent 7-cyano-7-deazaguanine reductase n=290 Tax=Enterobacteriaceae RepID=QUEF_ECO24
queF; 7-cyano-7-deazaguanine reductase
L2_019_061G1_scaffold_213_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28776..29321
DNA (546bp) protein (182aa)
Protein Syd n=912 Tax=Enterobacteriaceae RepID=SYDP_ECO24
Syd family protein
Protein Syd {ECO:0000256|HAMAP-Rule:MF_01104, ECO:0000256|SAAS:SAAS00064630}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE73.;"
L2_019_061G1_scaffold_213_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29943..30272
DNA (330bp) protein (110aa)
Uncharacterized protein n=176 Tax=Escherichia coli RepID=B7MZ88_ECO81
ygcC; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHU07338.1}; TaxID=868135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1C.;"
L2_019_061G1_scaffold_213_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30272..31054
DNA (783bp) protein (261aa)
Pseudouridine synthase n=194 Tax=Escherichia RepID=D2NLU8_ECOS5
yqcB; tRNA pseudouridine synthase C
RNA pseudouridylate synthase family protein {ECO:0000313|EMBL:KEJ56233.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
Displaying items 1-30 of 41 in total

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