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L2_019_061G1_scaffold_235

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_061G1_scaffold_235_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(827..2950)
DNA (2124bp) protein (708aa)
Ferrous iron transport protein B n=1 Tax=Clostridium perfringens F262 RepID=H7CUB7_CLOPF
Ferrous iron transport protein B {ECO:0000313|EMBL:EIA17639.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
feoB; ferrous iron transport protein B
L2_019_061G1_scaffold_235_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2968..3186)
DNA (219bp) protein (73aa)
Ferrous iron transport protein A n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TSD4_CLOP1
feoA; ferrous iron transport protein A
Ferrous iron transport protein A {ECO:0000313|EMBL:EDS79100.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L2_019_061G1_scaffold_235_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3807..3971
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RCX7_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT28335.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L2_019_061G1_scaffold_235_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4025..4846
DNA (822bp) protein (274aa)
Putative membrane protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RMP0_CLOPF
Putative membrane protein {ECO:0000313|EMBL:EDT28251.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L2_019_061G1_scaffold_235_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4866..5165
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RMN9_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT70951.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
hypothetical protein
L2_019_061G1_scaffold_235_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5456..5578
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RMN9_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17643.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_019_061G1_scaffold_235_7
unknown

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5720..6241
DNA (522bp) protein (174aa)

This feature has no annotations

L2_019_061G1_scaffold_235_8
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6409..6972
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI0003679047
Uncharacterized protein {ECO:0000313|EMBL:KEI08525.1}; TaxID=1443122 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi B str. NCTC 9691.;"
L2_019_061G1_scaffold_235_9
Bacillus phage Bcp1, Caudovirales, Viruses

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7464..8444
DNA (981bp) protein (327aa)
Cytosine-specific methyltransferase n=1 Tax=Bacillus cereus BtB2-4 RepID=J8ZYV1_BACCE
C-5 cytosine-specific DNA methylase II {ECO:0000313|EMBL:AHN66609.1}; TaxID=584892 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Bacillus phage Bcp1.;"
DNA-cytosine methyltransferase
L2_019_061G1_scaffold_235_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8483..9544
DNA (1062bp) protein (354aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
DNA methyltransferase n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B6B82F
C-5 cytosine-specific family DNA methylase
L2_019_061G1_scaffold_235_11
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9560..11209
DNA (1650bp) protein (550aa)
LlaI.2 n=1 Tax=Clostridium sp. CAG:265 RepID=R6KXN6_9CLOT
LlaI.2 {ECO:0000313|EMBL:CDB74686.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
LlaI.2
L2_019_061G1_scaffold_235_12
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11216..12640
DNA (1425bp) protein (475aa)
Type II restriction-modification system restriction subunit n=1 Tax=Clostridium sp. CAG:265 RepID=R6LKM6_9CLOT
Type II restriction-modification system restriction subunit {ECO:0000313|EMBL:CDB74687.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
type II restriction-modification system restriction subunit
L2_019_061G1_scaffold_235_13
unknown

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12782..13165
DNA (384bp) protein (128aa)

This feature has no annotations

L2_019_061G1_scaffold_235_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13235..13660)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BM53_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS79060.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L2_019_061G1_scaffold_235_15
unknown

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14416..15966
DNA (1551bp) protein (517aa)

This feature has no annotations

L2_019_061G1_scaffold_235_16
unknown

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15967..17274
DNA (1308bp) protein (436aa)

This feature has no annotations

L2_019_061G1_scaffold_235_17
Caloramator australicus, Caloramator, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17284..18186
DNA (903bp) protein (301aa)
CRISPR repeat RNA endoribonuclease Cas6 n=1 Tax=Caloramator australicus RC3 RepID=I7KAH0_9CLOT
CRISPR repeat RNA endoribonuclease Cas6 {ECO:0000313|EMBL:CCJ34757.1}; TaxID=857293 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloramator.;" source="Caloramator australicus RC3.;"
hypothetical protein
L2_019_061G1_scaffold_235_18
unknown

Not on your lists

18200..19474
DNA (1275bp) protein (425aa)
hypothetical protein
L2_019_061G1_scaffold_235_19
unknown

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19476..20405
DNA (930bp) protein (310aa)

This feature has no annotations

L2_019_061G1_scaffold_235_20
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20405..21916
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RMM3_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETI96661.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
L2_019_061G1_scaffold_235_21
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21931..22596
DNA (666bp) protein (222aa)
Uncharacterized protein n=4 Tax=Clostridium thermocellum RepID=E6ULR7_CLOTL
hypothetical protein
Putative RAMP superfamily protein probably involved in DNA repair {ECO:0000313|EMBL:AEV68766.1}; Flags: Precursor;; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
L2_019_061G1_scaffold_235_22
Desulfotomaculum ruminis, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22598..24166
DNA (1569bp) protein (523aa)
Uncharacterized protein n=4 Tax=Clostridium thermocellum RepID=E6ULR8_CLOTL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG61723.1}; TaxID=696281 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 /; DL).;"
L2_019_061G1_scaffold_235_23
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24169..25428
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RMH3_CLOPF
putative RAMP superfamily protein probably involved in DNA repair
Putative RAMP superfamily protein probably involved in DNA repair {ECO:0000313|EMBL:AEV68764.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
L2_019_061G1_scaffold_235_24
unknown

Not on your lists

25428..25850
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RMH2_CLOPF
L2_019_061G1_scaffold_235_25
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25863..27749
DNA (1887bp) protein (629aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RMH1_CLOPF
hypothetical protein
CRISPR-associated protein {ECO:0000313|EMBL:AEV68762.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
L2_019_061G1_scaffold_235_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28928..29161
DNA (234bp) protein (78aa)
ISCpe2, transposase OrfA n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RI43_CLOPF
ISCpe2, transposase orfA
ISCpe2, transposase orfA {ECO:0000313|EMBL:ABG86711.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Displaying 26 items

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