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L2_019_061G1_scaffold_254

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Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_061G1_scaffold_254_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..2315)
DNA (2313bp) protein (771aa)
gltB; glutamate synthase subunit alpha (EC:1.4.1.13)
Glutamate synthase [NADPH] large chain n=1 Tax=Escherichia coli HVH 194 (4-2356805) RepID=T7TT35_ECOLX
Glutamate synthase [NADPH] large chain {ECO:0000313|EMBL:EQP45981.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L2_019_061G1_scaffold_254_2
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2897..3826
DNA (930bp) protein (310aa)
Uncharacterized protein yhcC n=220 Tax=Escherichia RepID=E2QEP4_ECOLX
putative Fe-S oxidoreductase
Radical SAM protein family {ECO:0000313|EMBL:CDC82044.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
L2_019_061G1_scaffold_254_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3922..6258
DNA (2337bp) protein (779aa)
Aerobic respiration control sensor protein ArcB n=151 Tax=Escherichia coli RepID=E1PFU3_ECOAB
Aerobic respiration control sensor protein ArcB {ECO:0000313|EMBL:EQP45979.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
arcB; aerobic respiration control sensor protein ArcB
L2_019_061G1_scaffold_254_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6488..7141
DNA (654bp) protein (218aa)
Sigma cross-reacting protein 27A n=282 Tax=Escherichia RepID=D2NN57_ECOS5
yhbL; isoprenoid biosynthesis protein
Sigma cross-reacting protein 27A {ECO:0000313|EMBL:BAI56581.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
L2_019_061G1_scaffold_254_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7138..7866
DNA (729bp) protein (243aa)
mtgA; monofunctional biosynthetic peptidoglycan transglycosylase (EC:2.4.2.-)
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000255|HAMAP-Rule:MF_00766}; Short=Monofunctional TGase {ECO:0000255|HAMAP-Rule:MF_00766};; EC=2.4.2.- {ECO:0000255|HAMAP-Rule:MF_00766};; TaxID=362663 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O6:K15:H31 (strain 536 / UPEC).;"
Monofunctional biosynthetic peptidoglycan transglycosylase n=351 Tax=Escherichia RepID=MTGA_ECO45
L2_019_061G1_scaffold_254_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7863..8495)
DNA (633bp) protein (211aa)
Uncharacterized protein YrbL n=461 Tax=Enterobacteriaceae RepID=YRBL_ECOLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKJ83682.1}; TaxID=1169664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli AD30.;"
L2_019_061G1_scaffold_254_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8708..8980)
DNA (273bp) protein (91aa)
Phosphocarrier protein NPr n=1436 Tax=Enterobacteriaceae RepID=PTSO_ECO57
npr; phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system
Phosphocarrier, HPr family protein {ECO:0000313|EMBL:EHU36516.1}; TaxID=868139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2B.;"
L2_019_061G1_scaffold_254_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8977..9831)
DNA (855bp) protein (285aa)
UPF0042 nucleotide-binding protein YhbJ n=1396 Tax=Enterobacteriaceae RepID=YHBJ_ECO24
hypothetical protein
RNase adapter protein RapZ {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
L2_019_061G1_scaffold_254_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9877..10368)
DNA (492bp) protein (164aa)
Nitrogen regulatory IIA protein n=384 Tax=Escherichia RepID=A1AGA5_ECOK1
ptsN; PTS system transporter subunit IIA-like nitrogen-regulatory protein PtsN
PTS IIA-like nitrogen-regulatory protein PtsN {ECO:0000313|EMBL:EHU05887.1}; TaxID=868133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1A.;"
L2_019_061G1_scaffold_254_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10486..10773)
DNA (288bp) protein (96aa)
Ribosome hibernation promoting factor n=1406 Tax=Enterobacteriaceae RepID=HPF_ECO57
raiA; putative sigma(54) modulation protein (ORF95) RaiA
Ribosomal subunit interface protein {ECO:0000313|EMBL:EQY81087.1}; TaxID=1281237 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3304-1.;"
L2_019_061G1_scaffold_254_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10796..12229)
DNA (1434bp) protein (478aa)
rpoN; RNA polymerase factor sigma-54 (EC:2.7.7.6)
RNA polymerase sigma-54 factor n=5 Tax=Escherichia coli RepID=T6H7F7_ECOLX
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L2_019_061G1_scaffold_254_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12277..13002)
DNA (726bp) protein (242aa)
Lipopolysaccharide export system ATP-binding protein LptB n=1395 Tax=Enterobacteriaceae RepID=LPTB_ECO57
lptB; transporter subunit: ATP-binding component of ABC superfamily
Lipopolysaccharide export system ATP-binding protein LptB {ECO:0000313|EMBL:EOV55143.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
L2_019_061G1_scaffold_254_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13009..13566)
DNA (558bp) protein (186aa)
Lipopolysaccharide export system protein LptA n=1259 Tax=Enterobacteriaceae RepID=LPTA_ECO57
lptA; periplasmic LPS-binding protein
Lipopolysaccharide export system protein LptA {ECO:0000256|HAMAP-Rule:MF_01914}; Flags: Precursor;; TaxID=1433131 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli IS1.;"
L2_019_061G1_scaffold_254_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13535..14110)
DNA (576bp) protein (192aa)
Lipopolysaccharide export system protein LptC n=1313 Tax=Enterobacteriaceae RepID=LPTC_ECO57
hypothetical protein
Lipopolysaccharide export system protein LptC {ECO:0000256|HAMAP-Rule:MF_01915, ECO:0000256|PIRNR:PIRNR028513}; TaxID=1050617 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMNF18.;"
L2_019_061G1_scaffold_254_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14107..14673)
DNA (567bp) protein (189aa)
kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC:3.1.3.45)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC {ECO:0000313|EMBL:KEN95313.1}; EC=3.1.3.45 {ECO:0000313|EMBL:KEN95313.1};; TaxID=1444153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C2.;"
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC n=492 Tax=Enterobacteriaceae RepID=KDSC_ECO57
L2_019_061G1_scaffold_254_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14694..15680)
DNA (987bp) protein (329aa)
Arabinose 5-phosphate isomerase {ECO:0000256|PIRNR:PIRNR004692}; Short=API {ECO:0000256|PIRNR:PIRNR004692};; EC=5.3.1.13 {ECO:0000256|PIRNR:PIRNR004692};; TaxID=754086 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli STEC_DG131-3.;"
Arabinose 5-phosphate isomerase KdsD n=971 Tax=Enterobacteriaceae RepID=KDSD_ECOLI
kdsD; D-arabinose 5-phosphate isomerase
L2_019_061G1_scaffold_254_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15694..16671)
DNA (978bp) protein (326aa)
Uncharacterized protein n=345 Tax=Escherichia RepID=D2NN44_ECOS5
yrbG; calcium/sodium:proton antiporter
Inner membrane protein yrbG {ECO:0000313|EMBL:EQP45965.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L2_019_061G1_scaffold_254_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16881..17690
DNA (810bp) protein (270aa)
Probable phospholipid import ATP-binding protein MlaF n=1316 Tax=Enterobacteriaceae RepID=MLAF_ECO57
yrbF; ABC transporter ATP-binding protein
Uncharacterized protein {ECO:0000313|EMBL:EHP65806.1}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4_1_47FAA.;"
L2_019_061G1_scaffold_254_19
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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17698..18480
DNA (783bp) protein (261aa)
Probable phospholipid ABC transporter permease protein MlaE n=1399 Tax=Enterobacteriaceae RepID=MLAE_ECO57
toluene ABC transporter permease
Putative phospholipid ABC transporter permease protein mlaE {ECO:0000313|EMBL:EIQ26271.1}; TaxID=766138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii 965-58.;"
L2_019_061G1_scaffold_254_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18485..19036
DNA (552bp) protein (184aa)
Probable phospholipid ABC transporter-binding protein MlaD n=1118 Tax=Enterobacteriaceae RepID=MLAD_ECO57
hypothetical protein
ABC-type organic solvent transporter {ECO:0000313|EMBL:EQQ02149.1}; TaxID=1281024 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 87 (4-5977630).;"
L2_019_061G1_scaffold_254_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19055..19690
DNA (636bp) protein (212aa)
Protein yrbC n=601 Tax=Enterobacteriaceae RepID=C3SSD2_ECOLX
ttg2D; toluene tolerance protein Ttg2D
MlaC {ECO:0000313|EMBL:EHU41416.1}; TaxID=868141 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2D.;"
L2_019_061G1_scaffold_254_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19690..19983
DNA (294bp) protein (98aa)
Uncharacterized protein yrbB n=402 Tax=Escherichia RepID=E2QEM4_ECOLX
yrbB; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOW94240.1}; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE182.;"
L2_019_061G1_scaffold_254_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20128..20397
DNA (270bp) protein (90aa)
Transcriptional regulator n=9 Tax=Escherichia coli RepID=L4CT50_ECOLX
hypothetical protein
Transcriptional regulator {ECO:0000313|EMBL:EOW02572.1}; TaxID=1182701 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE102.;"
L2_019_061G1_scaffold_254_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20452..21711
DNA (1260bp) protein (420aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=796392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 79-10.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1122 Tax=cellular organisms RepID=MURA_ECO24
L2_019_061G1_scaffold_254_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21759..22037)
DNA (279bp) protein (93aa)
Sugar fermentation stimulation protein B n=1131 Tax=Enterobacteriaceae RepID=SFSB_ECO57
transcriptional regulator Nlp
Winged helix-turn-helix DNA-binding family protein {ECO:0000313|EMBL:KEN87669.1}; TaxID=1444123 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C1.;"
L2_019_061G1_scaffold_254_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22272..23243)
DNA (972bp) protein (324aa)
Octaprenyl-diphosphate synthase n=810 Tax=Enterobacteriaceae RepID=ISPB_ECOLI
ispB; hypothetical protein
Octaprenyl diphosphate synthase {ECO:0000313|EMBL:KDV41178.1}; TaxID=1446599 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O146:H21 str. 2010C-3325.;"
L2_019_061G1_scaffold_254_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


23502..23813
DNA (312bp) protein (104aa)
50S ribosomal protein L21 n=1432 Tax=Enterobacteriaceae RepID=RL21_ECO24
rplU; 50S ribosomal protein L21
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1116072 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.11.;"
L2_019_061G1_scaffold_254_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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23834..24091
DNA (258bp) protein (86aa)
50S ribosomal protein L27 n=1432 Tax=Enterobacteriaceae RepID=RL27_ECO24
rpmA; 50S ribosomal protein L27
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1182682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE75.;"
L2_019_061G1_scaffold_254_29
Escherichia fergusonii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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24218..25183
DNA (966bp) protein (322aa)
Uncharacterized GTP-binding protein yhbZ n=307 Tax=Escherichia RepID=E2QEL7_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAQ90654.1}; TaxID=585054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73).;"
L2_019_061G1_scaffold_254_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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25199..26371
DNA (1173bp) protein (391aa)
GTPase Obg n=667 Tax=Enterobacteriaceae RepID=OBG_ECO24
obgE; GTPase CgtA
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1444150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-156-04_S3_C2.;"
Displaying items 1-30 of 31 in total

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