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L2_019_061G1_scaffold_415

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_061G1_scaffold_415_1
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(244..870)
DNA (627bp) protein (209aa)
Uncharacterized protein {ECO:0000313|EMBL:KGI73924.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L2_019_061G1_scaffold_415_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(851..1051)
DNA (201bp) protein (67aa)
Periplasmic binding protein and sugar binding domain of the LacI protein (Fragment) n=1 Tax=Bifidobacterium longum subsp. longum 35B RepID=I3AVW4_BIFLN
Periplasmic binding protein and sugar binding domain of the LacI protein {ECO:0000313|EMBL:EIJ23257.1}; Flags: Fragment;; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_019_061G1_scaffold_415_3
Bifidobacterium thermacidophilum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1048..1581)
DNA (534bp) protein (178aa)
MFS permease n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GUL9_BIFLS
Transposase {ECO:0000313|EMBL:KFJ02054.1}; TaxID=79262 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium thermacidophilum subsp. thermacidophilum.;"
MFS permease
L2_019_061G1_scaffold_415_4
unknown

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comp(1640..1789)
DNA (150bp) protein (50aa)

This feature has no annotations

L2_019_061G1_scaffold_415_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1988..3625)
DNA (1638bp) protein (546aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GWI7_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EEI80450.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
hypothetical protein
L2_019_061G1_scaffold_415_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3636..5012)
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GWJ1_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EEI80454.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
hypothetical protein
L2_019_061G1_scaffold_415_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5152..7047
DNA (1896bp) protein (632aa)
Rhamnan synthesis protein F n=3 Tax=Bifidobacterium longum subsp. longum RepID=C2GWJ2_BIFLN
Rhamnan synthesis protein F {ECO:0000313|EMBL:EIJ29247.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
lipopolysaccharide biosynthesis protein
L2_019_061G1_scaffold_415_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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7049..8092
DNA (1044bp) protein (348aa)
Acyltransferase n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3AY30_BIFLN
Acyltransferase {ECO:0000313|EMBL:EIJ29244.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
acyltransferase
L2_019_061G1_scaffold_415_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8181..9056)
DNA (876bp) protein (292aa)
NAD dependent epimerase/dehydratase family protein n=3 Tax=Bifidobacterium longum subsp. longum RepID=C2GWJ4_BIFLN
Nucleoside-diphosphate-sugar epimerase family protein {ECO:0000313|EMBL:KFI70145.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
nucleoside-diphosphate-sugar epimerase family protein
L2_019_061G1_scaffold_415_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9127..10200)
DNA (1074bp) protein (358aa)
Glycosyltransferase involved in cell wall biogenesis {ECO:0000313|EMBL:KFI70144.1}; EC=2.4.1.175 {ECO:0000313|EMBL:KFI70144.1};; EC=2.4.1.226 {ECO:0000313|EMBL:KFI70144.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Glycosyltransferase, group 2 family protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3BCZ8_BIFLN
Glycosyltransferase involved in cell wall biogenesis
L2_019_061G1_scaffold_415_11
Bifidobacterium saguini, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(10308..12035)
DNA (1728bp) protein (576aa)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:KFI91128.1}; EC=3.2.1.81 {ECO:0000313|EMBL:KFI91128.1};; Flags: Fragment;; TaxID=1437607 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saguini DSM 23967.;"
N-acetylmuramoyl-L-alanine amidase (Fragment) n=1 Tax=Actinobaculum sp. oral taxon 183 str. F0552 RepID=U1PKQ1_9ACTO
lytC; 1,4-beta-N-acetylmuramidase
L2_019_061G1_scaffold_415_12
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12133..12591
DNA (459bp) protein (153aa)
Transposase n=1 Tax=Bifidobacterium longum E18 RepID=V6XVE0_BIFLN
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32189.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
transposase
L2_019_061G1_scaffold_415_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12448..13296)
DNA (849bp) protein (283aa)
Integrase, catalytic region n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4QZU5_BIFLM
Putative phosphopantetheinyl transferase {ECO:0000313|EMBL:BAR00150.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
integrase catalytic subunit
Displaying 13 items

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