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L2_019_061G1_scaffold_21

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Displaying items 1-30 of 152 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_061G1_scaffold_21_1
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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3..1283
DNA (1281bp) protein (427aa)
1,4-dihydroxy-2-naphthoyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934}; Short=DHNA-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934};; EC=4.1.3.36 {ECO:0000256|HAMAP-Rule:MF_01934};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D5C5E3 related cluster n=1 Tax=unknown RepID=UPI0003D5C5E3
naphthoate synthase
L2_019_061G1_scaffold_21_2
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1397..2479
DNA (1083bp) protein (361aa)
o-succinylbenzoate synthase {ECO:0000256|SAAS:SAAS00050627}; EC=4.2.1.- {ECO:0000256|SAAS:SAAS00275121};; EC=4.2.1.113 {ECO:0000256|SAAS:SAAS00050577};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
menC; O-succinylbenzoate-CoA synthase (EC:4.2.1.113)
UPI0003D5E833 related cluster n=1 Tax=unknown RepID=UPI0003D5E833
L2_019_061G1_scaffold_21_3
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2476..4653
DNA (2178bp) protein (726aa)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase {ECO:0000256|HAMAP-Rule:MF_01659}; Short=SEPHCHC synthase {ECO:0000256|HAMAP-Rule:MF_01659};; EC=2.2.1.9 {ECO:0000256|HAMAP-Rule:MF_01659};; Menaquinone biosynthesis protein MenD {ECO:0000256|HAMAP-Rule:MF_01659}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D5AD0E related cluster n=1 Tax=unknown RepID=UPI0003D5AD0E
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase
L2_019_061G1_scaffold_21_4
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4662..6035)
DNA (1374bp) protein (458aa)
isochorismate synthase n=1 Tax=Varibaculum cambriense RepID=UPI0003B673ED
Isochorismate synthase {ECO:0000313|EMBL:ETI83776.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
isochorismate synthase
L2_019_061G1_scaffold_21_5
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


6466..6840
DNA (375bp) protein (125aa)
30S ribosomal protein S12 n=1 Tax=Varibaculum cambriense RepID=UPI0003B5810D
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
30S ribosomal protein S12
L2_019_061G1_scaffold_21_6
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


6842..7312
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Varibaculum cambriense RepID=UPI0003B74332
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
30S ribosomal protein S7
L2_019_061G1_scaffold_21_7
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7334..9487
DNA (2154bp) protein (718aa)
UPI0003D5D7FD related cluster n=1 Tax=unknown RepID=UPI0003D5D7FD
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
fusA; elongation factor EF2
L2_019_061G1_scaffold_21_8
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9616..10806
DNA (1191bp) protein (397aa)
UPI0003D638F4 related cluster n=1 Tax=unknown RepID=UPI0003D638F4
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
elongation factor Tu
L2_019_061G1_scaffold_21_9
Arcanobacterium sp. S3PF19, Arcanobacterium, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11089..17856
DNA (6768bp) protein (2256aa)
Uncharacterized protein n=1 Tax=Actinomyces neuii BVS029A5 RepID=K0Z772_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KGF06446.1}; TaxID=1219585 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Arcanobacterium.;" source="Arcanobacterium sp. S3PF19.;"
putative surface-anchored membrane protein
L2_019_061G1_scaffold_21_10
Arcanobacterium sp. S3PF19, Arcanobacterium, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18060..19535
DNA (1476bp) protein (492aa)
Uncharacterized protein n=1 Tax=Actinomyces neuii BVS029A5 RepID=K0ZJQ0_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KGF06445.1}; TaxID=1219585 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Arcanobacterium.;" source="Arcanobacterium sp. S3PF19.;"
type-2 fimbrial major subunit precursor
L2_019_061G1_scaffold_21_11
Arcanobacterium sp. S3PF19, Arcanobacterium, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19594..20595
DNA (1002bp) protein (334aa)
Sortase n=1 Tax=Actinomyces neuii BVS029A5 RepID=K0YWH6_9ACTO
Fimbrial protein {ECO:0000313|EMBL:KGF06444.1}; TaxID=1219585 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Arcanobacterium.;" source="Arcanobacterium sp. S3PF19.;"
srtA; fimbrial associated sortase family protein
L2_019_061G1_scaffold_21_12
Actinomyces neuii, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20592..21326
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B2F970
Uncharacterized protein {ECO:0000313|EMBL:EJZ88017.1}; TaxID=888439 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces neuii BVS029A5.;"
hypothetical protein
L2_019_061G1_scaffold_21_13
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21703..21924
DNA (222bp) protein (74aa)
UPI0003D5A861 related cluster n=1 Tax=unknown RepID=UPI0003D5A861
Toxin-antitoxin system, antitoxin component, ribbon-helix-helix fold family protein {ECO:0000313|EMBL:ETI83771.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_019_061G1_scaffold_21_14
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21921..22187
DNA (267bp) protein (89aa)
UPI0003D5F5D0 related cluster n=1 Tax=unknown RepID=UPI0003D5F5D0
Toxin-antitoxin system, toxin component, RelE family {ECO:0000313|EMBL:ETI83770.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
plasmid stabilization system protein
L2_019_061G1_scaffold_21_15
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


22984..23292
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=1 Tax=Varibaculum cambriense RepID=UPI0003B3FA04
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
30S ribosomal protein S10
L2_019_061G1_scaffold_21_16
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


23304..23972
DNA (669bp) protein (223aa)
UPI0003D61E68 related cluster n=1 Tax=unknown RepID=UPI0003D61E68
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
rplC; 50S ribosomal protein L3
L2_019_061G1_scaffold_21_17
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


23975..24619
DNA (645bp) protein (215aa)
UPI0003D667E7 related cluster n=1 Tax=unknown RepID=UPI0003D667E7
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
rplD; 50S ribosomal protein L4
L2_019_061G1_scaffold_21_18
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


24624..24929
DNA (306bp) protein (102aa)
UPI0003D5A859 related cluster n=1 Tax=unknown RepID=UPI0003D5A859
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
50S ribosomal protein L23P
L2_019_061G1_scaffold_21_19
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


24944..25780
DNA (837bp) protein (279aa)
UPI0003D61641 related cluster n=1 Tax=unknown RepID=UPI0003D61641
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
rplB; 50S ribosomal protein L2
L2_019_061G1_scaffold_21_20
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


25795..26076
DNA (282bp) protein (94aa)
UPI0003D69449 related cluster n=1 Tax=unknown RepID=UPI0003D69449
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
rpsS; 30S ribosomal protein S19
L2_019_061G1_scaffold_21_21
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


26104..26472
DNA (369bp) protein (123aa)
50S ribosomal protein L22 n=1 Tax=Varibaculum cambriense RepID=UPI0003B6F007
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
50S ribosomal protein L22
L2_019_061G1_scaffold_21_22
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


26472..27368
DNA (897bp) protein (299aa)
30S ribosomal protein S3 n=1 Tax=Varibaculum cambriense RepID=UPI0003B6E374
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
30S ribosomal protein S3
L2_019_061G1_scaffold_21_23
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


27370..27789
DNA (420bp) protein (140aa)
UPI0003D62141 related cluster n=1 Tax=unknown RepID=UPI0003D62141
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
rplP; 50S ribosomal protein L16
L2_019_061G1_scaffold_21_24
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


27789..28019
DNA (231bp) protein (77aa)
50S ribosomal protein L29 n=1 Tax=Varibaculum cambriense RepID=UPI0003B3E3C3
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
rpmC; 50S ribosomal protein L29
L2_019_061G1_scaffold_21_25
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


28025..28309
DNA (285bp) protein (95aa)
30S ribosomal protein S17 n=1 Tax=Varibaculum cambriense RepID=UPI0003B7A9FC
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
rpsQ; 30S ribosomal protein S17
L2_019_061G1_scaffold_21_26
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28613..29812
DNA (1200bp) protein (400aa)
iol; myo-inositol 2-dehydrogenase (EC:1.1.1.18)
myo-inositol 2-dehydrogenase n=1 Tax=Varibaculum cambriense RepID=UPI0003B4462A
Uncharacterized protein {ECO:0000313|EMBL:ETI83756.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_019_061G1_scaffold_21_27
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29844..31493
DNA (1650bp) protein (550aa)
major facilitator transporter n=1 Tax=Varibaculum cambriense RepID=UPI0003B47183
Uncharacterized protein {ECO:0000313|EMBL:ETI83755.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
sugar transporter
L2_019_061G1_scaffold_21_28
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31765..32520)
DNA (756bp) protein (252aa)
membrane protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B3311D
Uncharacterized protein {ECO:0000313|EMBL:ETI83754.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
sulfite exporter TauE/SafE
L2_019_061G1_scaffold_21_29
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32937..34064
DNA (1128bp) protein (376aa)
Alcohol dehydrogenase zinc-binding domain-containing protein (EC:1.1.1.284 1.1.1.1)
UPI0003D5EB8C related cluster n=1 Tax=unknown RepID=UPI0003D5EB8C
Uncharacterized protein {ECO:0000313|EMBL:ETI83753.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_019_061G1_scaffold_21_30
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34544..34774)
DNA (231bp) protein (77aa)
UPI0003D59DD7 related cluster n=1 Tax=unknown RepID=UPI0003D59DD7
Uncharacterized protein {ECO:0000313|EMBL:ETI83752.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
Displaying items 1-30 of 152 in total

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