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L2_019_061G1_scaffold_41

Search features with annotation key words

Displaying items 1-30 of 115 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_061G1_scaffold_41_1
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

296..1333
DNA (1038bp) protein (346aa)
UPI0003D5B88E related cluster n=1 Tax=unknown RepID=UPI0003D5B88E
Uncharacterized protein {ECO:0000313|EMBL:ETI83073.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_019_061G1_scaffold_41_2
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1687..2532)
DNA (846bp) protein (282aa)
UPI0003D63B57 related cluster n=1 Tax=unknown RepID=UPI0003D63B57
Uncharacterized protein {ECO:0000313|EMBL:ETI83072.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_019_061G1_scaffold_41_3
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3051..4643)
DNA (1593bp) protein (531aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
guaA; GMP synthase (EC:6.3.5.2)
UPI0003D5B583 related cluster n=1 Tax=unknown RepID=UPI0003D5B583
L2_019_061G1_scaffold_41_4
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4793..6307
DNA (1515bp) protein (505aa)
pta; phosphate acetyltransferase (EC:2.3.1.8)
UPI0003D59DF9 related cluster n=1 Tax=unknown RepID=UPI0003D59DF9
Uncharacterized protein {ECO:0000313|EMBL:ETI83064.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_019_061G1_scaffold_41_5
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6331..7521
DNA (1191bp) protein (397aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D593A5 related cluster n=1 Tax=unknown RepID=UPI0003D593A5
acetate kinase
L2_019_061G1_scaffold_41_6
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7646..8095)
DNA (450bp) protein (150aa)
UPI0003D6258A related cluster n=1 Tax=unknown RepID=UPI0003D6258A
Ribose 5-phosphate isomerase {ECO:0000313|EMBL:ETI83062.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ribose 5-phosphate isomerase
L2_019_061G1_scaffold_41_7
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8108..8848)
DNA (741bp) protein (247aa)
UPI0003D69459 related cluster n=1 Tax=unknown RepID=UPI0003D69459
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:ETI83061.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_019_061G1_scaffold_41_8
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8839..9660)
DNA (822bp) protein (274aa)
UPI0003D5EABA related cluster n=1 Tax=unknown RepID=UPI0003D5EABA
M23 peptidase protein {ECO:0000313|EMBL:ETI83060.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_019_061G1_scaffold_41_9
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9808..10851)
DNA (1044bp) protein (348aa)
UPI0003D5F1F4 related cluster n=1 Tax=unknown RepID=UPI0003D5F1F4
Uncharacterized protein {ECO:0000313|EMBL:ETI83059.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_019_061G1_scaffold_41_10
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10844..12202)
DNA (1359bp) protein (453aa)
UPI0003D692C7 related cluster n=1 Tax=unknown RepID=UPI0003D692C7
Uncharacterized protein {ECO:0000313|EMBL:ETI83058.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_019_061G1_scaffold_41_11
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12436..16161
DNA (3726bp) protein (1242aa)
UPI0003D62CE0 related cluster n=1 Tax=unknown RepID=UPI0003D62CE0
Uncharacterized protein {ECO:0000313|EMBL:ETI83057.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
2-oxoglutarate dehydrogenase E1
L2_019_061G1_scaffold_41_12
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16446..16733)
DNA (288bp) protein (96aa)
UPI0003D61578 related cluster n=1 Tax=unknown RepID=UPI0003D61578
Uncharacterized protein {ECO:0000313|EMBL:ETI83056.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_019_061G1_scaffold_41_13
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16733..17431)
DNA (699bp) protein (233aa)
UPI0003D609A1 related cluster n=1 Tax=unknown RepID=UPI0003D609A1
ECF-family sigma factor H {ECO:0000313|EMBL:ETI83055.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
sigH; ECF-family sigma factor H
L2_019_061G1_scaffold_41_14
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17574..17912
DNA (339bp) protein (113aa)
UPI0003D67B72 related cluster n=1 Tax=unknown RepID=UPI0003D67B72
Uncharacterized protein {ECO:0000313|EMBL:ETI83054.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_019_061G1_scaffold_41_15
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17916..19244
DNA (1329bp) protein (443aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D66721 related cluster n=1 Tax=unknown RepID=UPI0003D66721
3-phosphoshikimate 1-carboxyvinyltransferase
L2_019_061G1_scaffold_41_16
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19231..20232
DNA (1002bp) protein (334aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D66C5D related cluster n=1 Tax=unknown RepID=UPI0003D66C5D
ribosome small subunit-dependent GTPase A
L2_019_061G1_scaffold_41_17
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20194..20985)
DNA (792bp) protein (264aa)
UPI0003D5FCCB related cluster n=1 Tax=unknown RepID=UPI0003D5FCCB
Uncharacterized protein {ECO:0000313|EMBL:ETI83051.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
histidinol-phosphate phosphatase
L2_019_061G1_scaffold_41_18
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20987..21745)
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B4C40E
3-dehydroquinate dehydratase {ECO:0000313|EMBL:ETI83050.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_019_061G1_scaffold_41_19
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21834..23081
DNA (1248bp) protein (416aa)
UPI0003D692E5 related cluster n=1 Tax=unknown RepID=UPI0003D692E5
Uncharacterized protein {ECO:0000313|EMBL:ETI83049.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
exodeoxyribonuclease I subunit D
L2_019_061G1_scaffold_41_20
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23082..26156
DNA (3075bp) protein (1025aa)
UPI0003D6009B related cluster n=1 Tax=unknown RepID=UPI0003D6009B
Uncharacterized protein {ECO:0000313|EMBL:ETI83048.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
exonuclease
L2_019_061G1_scaffold_41_21
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26190..26885)
DNA (696bp) protein (232aa)
UPI0003D63F27 related cluster n=1 Tax=unknown RepID=UPI0003D63F27
Putative metal-dependent transcriptional regulator {ECO:0000313|EMBL:ETI83047.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
DtxR family iron dependent repressor
L2_019_061G1_scaffold_41_22
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26902..27570)
DNA (669bp) protein (223aa)
UPI0003D5E945 related cluster n=1 Tax=unknown RepID=UPI0003D5E945
Integral membrane protein {ECO:0000313|EMBL:ETI83046.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_019_061G1_scaffold_41_23
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27674..29017)
DNA (1344bp) protein (448aa)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000256|RuleBase:RU003370}; EC=2.3.3.16 {ECO:0000256|RuleBase:RU003370};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D5E05F related cluster n=1 Tax=unknown RepID=UPI0003D5E05F
citrate synthase
L2_019_061G1_scaffold_41_24
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29121..30287)
DNA (1167bp) protein (389aa)
dapC; succinyldiaminopimelate transaminase (EC:2.6.1.17)
UPI0003D66052 related cluster n=1 Tax=unknown RepID=UPI0003D66052
Uncharacterized protein {ECO:0000313|EMBL:ETI83044.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_019_061G1_scaffold_41_25
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30370..30696)
DNA (327bp) protein (109aa)
UPI0003D620C0 related cluster n=1 Tax=unknown RepID=UPI0003D620C0
Ferredoxin {ECO:0000313|EMBL:ETI83043.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ferredoxin
L2_019_061G1_scaffold_41_26
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30994..32919)
DNA (1926bp) protein (642aa)
UPI0003D62D5C related cluster n=1 Tax=unknown RepID=UPI0003D62D5C
Uncharacterized protein {ECO:0000313|EMBL:ETI83041.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
GTP-binding protein TypA
L2_019_061G1_scaffold_41_27
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33031..33804)
DNA (774bp) protein (258aa)
UPI0003D64FF4 related cluster n=1 Tax=unknown RepID=UPI0003D64FF4
Uncharacterized protein {ECO:0000313|EMBL:ETI83040.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_019_061G1_scaffold_41_28
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33989..35302
DNA (1314bp) protein (438aa)
UPI0003D62213 related cluster n=1 Tax=unknown RepID=UPI0003D62213
Uncharacterized protein {ECO:0000313|EMBL:ETI83039.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
magnesium transporter
L2_019_061G1_scaffold_41_29
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35286..35795
DNA (510bp) protein (170aa)
UPI0003D5B06E related cluster n=1 Tax=unknown RepID=UPI0003D5B06E
Uncharacterized protein {ECO:0000313|EMBL:ETI83038.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_019_061G1_scaffold_41_30
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35946..37067
DNA (1122bp) protein (374aa)
UPI0003D6375A related cluster n=1 Tax=unknown RepID=UPI0003D6375A
Uncharacterized protein {ECO:0000313|EMBL:ETI83037.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
Displaying items 1-30 of 115 in total

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