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L2_019_061G1_scaffold_97

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_061G1_scaffold_97_1
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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188..451
DNA (264bp) protein (88aa)
UPI0003D6427F related cluster n=1 Tax=unknown RepID=UPI0003D6427F
Uncharacterized protein {ECO:0000313|EMBL:ETI82421.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
toxin-antitoxin system, antitoxin component
L2_019_061G1_scaffold_97_2
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

902..1639
DNA (738bp) protein (246aa)
UPI0003D5A7FB related cluster n=1 Tax=unknown RepID=UPI0003D5A7FB
Uncharacterized protein {ECO:0000313|EMBL:ETI82422.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
GntR family transcriptional regulator
L2_019_061G1_scaffold_97_3
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1636..2253
DNA (618bp) protein (206aa)
UPI0003D5A51C related cluster n=1 Tax=unknown RepID=UPI0003D5A51C
Uncharacterized protein {ECO:0000313|EMBL:ETI82423.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
sensor histidine kinase
L2_019_061G1_scaffold_97_4
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2263..3069
DNA (807bp) protein (269aa)
UPI0003D642B4 related cluster n=1 Tax=unknown RepID=UPI0003D642B4
Uncharacterized protein {ECO:0000313|EMBL:ETI82424.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ABC transporter permease
L2_019_061G1_scaffold_97_5
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3063..3917
DNA (855bp) protein (285aa)
UPI0003D63053 related cluster n=1 Tax=unknown RepID=UPI0003D63053
Uncharacterized protein {ECO:0000313|EMBL:ETI82425.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ABC transporter ATP-binding protein
L2_019_061G1_scaffold_97_6
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3901..4704
DNA (804bp) protein (268aa)
UPI0003D6539A related cluster n=1 Tax=unknown RepID=UPI0003D6539A
Uncharacterized protein {ECO:0000313|EMBL:ETI82426.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ABC transporter ATP-binding protein
L2_019_061G1_scaffold_97_7
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4739..5506
DNA (768bp) protein (256aa)
UPI0003D5B409 related cluster n=1 Tax=unknown RepID=UPI0003D5B409
Uncharacterized protein {ECO:0000313|EMBL:ETI82427.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
putative photosystem I biogenesis protein BtpA
L2_019_061G1_scaffold_97_8
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5499..6002
DNA (504bp) protein (168aa)
UPI0003D62271 related cluster n=1 Tax=unknown RepID=UPI0003D62271
Uncharacterized protein {ECO:0000313|EMBL:ETI82428.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_019_061G1_scaffold_97_9
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5992..6936
DNA (945bp) protein (315aa)
putative ribokinase (EC:2.7.1.15)
UPI0003D67672 related cluster n=1 Tax=unknown RepID=UPI0003D67672
Uncharacterized protein {ECO:0000313|EMBL:ETI82429.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_019_061G1_scaffold_97_10
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7030..8112
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B61354
RNA pseudouridine synthase {ECO:0000313|EMBL:ETI82430.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
pseudouridylate synthase
L2_019_061G1_scaffold_97_11
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8257..8733
DNA (477bp) protein (159aa)
UPI0002FC8B16 related cluster n=1 Tax=unknown RepID=UPI0002FC8B16
Uncharacterized protein {ECO:0000313|EMBL:EGG85459.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
Predicted nucleotidyltransferases
L2_019_061G1_scaffold_97_12
[Clostridium] hiranonis, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8726..9061
DNA (336bp) protein (112aa)
Putative toxin-antitoxin system, antitoxin component n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FY28_9FIRM
Putative toxin-antitoxin system, antitoxin component {ECO:0000313|EMBL:EEA85575.1}; TaxID=500633 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] hiranonis DSM 13275.;"
hypothetical protein
L2_019_061G1_scaffold_97_13
unknown

Not on your lists

comp(9115..9246)
DNA (132bp) protein (44aa)

This feature has no annotations

L2_019_061G1_scaffold_97_14
Gordonia araii, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9243..11024)
DNA (1782bp) protein (594aa)
Putative uncharacterized protein n=1 Tax=Gordonia araii NBRC 100433 RepID=G7GXY4_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:GAB08459.1}; TaxID=1073574 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia araii NBRC 100433.;"
hypothetical protein
L2_019_061G1_scaffold_97_15
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11349..12821)
DNA (1473bp) protein (491aa)
UPI0003D66937 related cluster n=1 Tax=unknown RepID=UPI0003D66937
Uncharacterized protein {ECO:0000313|EMBL:ETI82433.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
amino acid ABC transporter permease
L2_019_061G1_scaffold_97_16
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13083..14375
DNA (1293bp) protein (431aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
serine hydroxymethyltransferase (EC:2.1.2.1)
UPI0003D67F51 related cluster n=1 Tax=unknown RepID=UPI0003D67F51
L2_019_061G1_scaffold_97_17
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14449..15351
DNA (903bp) protein (301aa)
folD; methenyltetrahydrofolate cyclohydrolase (EC:3.5.4.9)
UPI0003D64963 related cluster n=1 Tax=unknown RepID=UPI0003D64963
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_019_061G1_scaffold_97_18
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15366..16475
DNA (1110bp) protein (370aa)
UPI0003D5E7E6 related cluster n=1 Tax=unknown RepID=UPI0003D5E7E6
Uncharacterized protein {ECO:0000313|EMBL:ETI82436.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
basic membrane protein
L2_019_061G1_scaffold_97_19
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16502..17350
DNA (849bp) protein (283aa)
exodeoxyribonuclease III n=1 Tax=Varibaculum cambriense RepID=UPI0003B59F16
Exodeoxyribonuclease III {ECO:0000313|EMBL:ETI82437.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
putative exodeoxyribonuclease III
L2_019_061G1_scaffold_97_20
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17404..18804)
DNA (1401bp) protein (467aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
fumarate lyase (EC:4.2.1.2)
UPI0003D5A837 related cluster n=1 Tax=unknown RepID=UPI0003D5A837
L2_019_061G1_scaffold_97_21
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18976..19851
DNA (876bp) protein (292aa)
UPI0003D62171 related cluster n=1 Tax=unknown RepID=UPI0003D62171
Uncharacterized protein {ECO:0000313|EMBL:ETI82439.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_019_061G1_scaffold_97_22
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19930..20679)
DNA (750bp) protein (250aa)
polyphosphate--glucose phosphotransferase (EC:2.7.1.63)
UPI0003D5D46E related cluster n=1 Tax=unknown RepID=UPI0003D5D46E
Uncharacterized protein {ECO:0000313|EMBL:ETI82440.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_019_061G1_scaffold_97_23
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20683..21594)
DNA (912bp) protein (304aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D61F45 related cluster n=1 Tax=unknown RepID=UPI0003D61F45
methionine aminopeptidase
L2_019_061G1_scaffold_97_24
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21822..22646)
DNA (825bp) protein (275aa)
UPI0003D6448A related cluster n=1 Tax=unknown RepID=UPI0003D6448A
LacI family transcriptional regulator {ECO:0000313|EMBL:ETI82442.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
LacI family transcriptional regulator
L2_019_061G1_scaffold_97_25
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


22843..23928
DNA (1086bp) protein (362aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D5E5ED related cluster n=1 Tax=unknown RepID=UPI0003D5E5ED
phenylalanyl-tRNA synthetase subunit alpha
L2_019_061G1_scaffold_97_26
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23931..26579
DNA (2649bp) protein (883aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
pheT; phenylalanine--tRNA ligase (EC:6.1.1.20)
UPI0003D5A81F related cluster n=1 Tax=unknown RepID=UPI0003D5A81F
L2_019_061G1_scaffold_97_27
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26805..27323
DNA (519bp) protein (173aa)
UPI0003D66BC7 related cluster n=1 Tax=unknown RepID=UPI0003D66BC7
Uncharacterized protein {ECO:0000313|EMBL:ETI82445.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_019_061G1_scaffold_97_28
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27690..29573
DNA (1884bp) protein (628aa)
UPI0003D62B34 related cluster n=1 Tax=unknown RepID=UPI0003D62B34
Uncharacterized protein {ECO:0000313|EMBL:ETI82446.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_019_061G1_scaffold_97_29
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29552..31177
DNA (1626bp) protein (542aa)
UPI0003D62B34 related cluster n=1 Tax=unknown RepID=UPI0003D62B34
Uncharacterized protein {ECO:0000313|EMBL:ETI82446.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
Microtubule/TRAF3 and DISC1 binding protein
L2_019_061G1_scaffold_97_30
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31309..31479)
DNA (171bp) protein (57aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B6163B
Uncharacterized protein {ECO:0000313|EMBL:ETI82447.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
Displaying items 1-30 of 59 in total

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