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L2_019_061G1_scaffold_105

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_061G1_scaffold_105_1
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

166..1716
DNA (1551bp) protein (517aa)
UPI0003D67599 related cluster n=1 Tax=unknown RepID=UPI0003D67599
Uncharacterized protein {ECO:0000313|EMBL:ETI83236.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_019_061G1_scaffold_105_2
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1828..2493
DNA (666bp) protein (222aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
dephospho-CoA kinase (EC:2.7.1.24)
UPI0003D5F2B5 related cluster n=1 Tax=unknown RepID=UPI0003D5F2B5
L2_019_061G1_scaffold_105_3
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2820..3551
DNA (732bp) protein (244aa)
membrane protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B6A0DC
Uncharacterized protein {ECO:0000313|EMBL:ETI83234.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
membrane protein
L2_019_061G1_scaffold_105_4
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3523..4776
DNA (1254bp) protein (418aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D66B57 related cluster n=1 Tax=unknown RepID=UPI0003D66B57
queuine tRNA-ribosyltransferase
L2_019_061G1_scaffold_105_5
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4812..5624)
DNA (813bp) protein (271aa)
Glutamyl-Q tRNA(Asp) synthetase {ECO:0000256|SAAS:SAAS00018238}; EC=6.1.1.- {ECO:0000256|SAAS:SAAS00018222};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D66172 related cluster n=1 Tax=unknown RepID=UPI0003D66172
glutamyl-Q tRNA(Asp) ligase
L2_019_061G1_scaffold_105_6
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5843..7852
DNA (2010bp) protein (670aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
thrS; threonine--tRNA ligase (EC:6.1.1.3)
UPI0003D6109F related cluster n=1 Tax=unknown RepID=UPI0003D6109F
L2_019_061G1_scaffold_105_7
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7856..8419
DNA (564bp) protein (188aa)
UPI0003D5C5BD related cluster n=1 Tax=unknown RepID=UPI0003D5C5BD
Histidine triad protein {ECO:0000313|EMBL:ETI83230.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
histidine triad (HIT) protein
L2_019_061G1_scaffold_105_8
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8433..9047
DNA (615bp) protein (205aa)
UPI0003D5E396 related cluster n=1 Tax=unknown RepID=UPI0003D5E396
Uncharacterized protein {ECO:0000313|EMBL:ETI83229.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
CDP-alcohol phosphatidyltransferase
L2_019_061G1_scaffold_105_9
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9048..9998
DNA (951bp) protein (317aa)
UPI0003D678CB related cluster n=1 Tax=unknown RepID=UPI0003D678CB
Uncharacterized protein {ECO:0000313|EMBL:ETI83228.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
lipid A biosynthesis acyltransferase
L2_019_061G1_scaffold_105_10
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9995..11125
DNA (1131bp) protein (377aa)
UPI0003D59269 related cluster n=1 Tax=unknown RepID=UPI0003D59269
Uncharacterized protein {ECO:0000313|EMBL:ETI83227.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
group 1 glycosyl transferase
L2_019_061G1_scaffold_105_11
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11203..12543
DNA (1341bp) protein (447aa)
UPI0003D5E585 related cluster n=1 Tax=unknown RepID=UPI0003D5E585
Uncharacterized protein {ECO:0000313|EMBL:ETI83226.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
membrane protein
L2_019_061G1_scaffold_105_12
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12545..13132
DNA (588bp) protein (196aa)
UPI0003D68F21 related cluster n=1 Tax=unknown RepID=UPI0003D68F21
NUDIX hydrolase {ECO:0000313|EMBL:ETI83225.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
NUDIX hydrolase
L2_019_061G1_scaffold_105_13
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13222..13983
DNA (762bp) protein (254aa)
UPI0003D62B1D related cluster n=1 Tax=unknown RepID=UPI0003D62B1D
Probable transcriptional regulatory protein Q618_VCMC00001G0805 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_019_061G1_scaffold_105_14
Actinomyces sp. S4-C9, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14050..14631
DNA (582bp) protein (194aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=1219581 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. S4-C9.;"
ruvC; crossover junction endodeoxyribonuclease (EC:3.1.22.4)
crossover junction endodeoxyribonuclease RuvC n=1 Tax=Varibaculum cambriense RepID=UPI0003B32637
L2_019_061G1_scaffold_105_15
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14671..15270
DNA (600bp) protein (200aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D684E2 related cluster n=1 Tax=unknown RepID=UPI0003D684E2
Holliday junction DNA helicase subunit RuvA
L2_019_061G1_scaffold_105_16
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15280..16404
DNA (1125bp) protein (375aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D62768 related cluster n=1 Tax=unknown RepID=UPI0003D62768
Holliday junction DNA helicase RuvB
L2_019_061G1_scaffold_105_17
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16452..16883
DNA (432bp) protein (144aa)
UPI0003D6422D related cluster n=1 Tax=unknown RepID=UPI0003D6422D
Uncharacterized protein {ECO:0000313|EMBL:ETI83219.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_019_061G1_scaffold_105_18
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16925..18808
DNA (1884bp) protein (628aa)
UPI0003D607D9 related cluster n=1 Tax=unknown RepID=UPI0003D607D9
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
protein-export membrane protein SecD
L2_019_061G1_scaffold_105_19
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18805..19893
DNA (1089bp) protein (363aa)
UPI0003D600CC related cluster n=1 Tax=unknown RepID=UPI0003D600CC
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
secF; protein export protein SecF
L2_019_061G1_scaffold_105_20
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19890..20429
DNA (540bp) protein (180aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
phosphoribosyltransferase (EC:2.4.2.7)
UPI0003D5DA67 related cluster n=1 Tax=unknown RepID=UPI0003D5DA67
L2_019_061G1_scaffold_105_21
unknown

Not on your lists

comp(20489..20581)
DNA (93bp) protein (31aa)

This feature has no annotations

L2_019_061G1_scaffold_105_22
unknown

Not on your lists

20950..21621
DNA (672bp) protein (224aa)

This feature has no annotations

L2_019_061G1_scaffold_105_23
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21699..24026
DNA (2328bp) protein (776aa)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
UPI0003D5BA51 related cluster n=1 Tax=unknown RepID=UPI0003D5BA51
Uncharacterized protein {ECO:0000313|EMBL:ETI83215.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_019_061G1_scaffold_105_24
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23970..24560)
DNA (591bp) protein (197aa)
UPI0003D5E0A9 related cluster n=1 Tax=unknown RepID=UPI0003D5E0A9
Uncharacterized protein {ECO:0000313|EMBL:ETI83214.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_019_061G1_scaffold_105_25
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24651..25406)
DNA (756bp) protein (252aa)
UPI0003D5AA25 related cluster n=1 Tax=unknown RepID=UPI0003D5AA25
Metallo-beta-lactamase superfamily protein {ECO:0000313|EMBL:ETI83213.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
Zn-dependent hydrolase
L2_019_061G1_scaffold_105_26
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25538..26878
DNA (1341bp) protein (447aa)
UPI0003D5A386 related cluster n=1 Tax=unknown RepID=UPI0003D5A386
Uncharacterized protein {ECO:0000313|EMBL:ETI83212.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_019_061G1_scaffold_105_27
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26907..28286
DNA (1380bp) protein (460aa)
UPI0003D60330 related cluster n=1 Tax=unknown RepID=UPI0003D60330
Uncharacterized protein {ECO:0000313|EMBL:ETI83211.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UTP--glucose-1-phosphate uridylyltransferase
L2_019_061G1_scaffold_105_28
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28410..30287)
DNA (1878bp) protein (626aa)
UPI0003D68966 related cluster n=1 Tax=unknown RepID=UPI0003D68966
Uncharacterized protein {ECO:0000313|EMBL:ETI83210.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
DEAD/DEAH box helicase
L2_019_061G1_scaffold_105_29
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


30453..32237
DNA (1785bp) protein (595aa)
aspS; aspartyl-tRNA synthase (EC:6.1.1.12)
UPI0003D65625 related cluster n=1 Tax=unknown RepID=UPI0003D65625
Uncharacterized protein {ECO:0000313|EMBL:ETI83209.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_019_061G1_scaffold_105_30
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32326..33294)
DNA (969bp) protein (323aa)
UPI0003D5FAB6 related cluster n=1 Tax=unknown RepID=UPI0003D5FAB6
Uncharacterized protein {ECO:0000313|EMBL:ETI83208.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
bile acid:sodium symporter
Displaying items 1-30 of 52 in total

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