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L2_019_070G1_scaffold_28

Search features with annotation key words

Displaying items 1-30 of 135 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_070G1_scaffold_28_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..157
DNA (156bp) protein (52aa)
Elongation factor Tu n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MG92_9CLOT
tuf; elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L2_019_070G1_scaffold_28_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


805..1113
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=11 Tax=Clostridium RepID=RS10_CLOB8
rpsJ; 30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
L2_019_070G1_scaffold_28_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


1187..1816
DNA (630bp) protein (210aa)
50S ribosomal protein L3 n=2 Tax=Clostridium butyricum RepID=C4IF55_CLOBU
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
rplC; 50S ribosomal protein L3
L2_019_070G1_scaffold_28_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


1842..2462
DNA (621bp) protein (207aa)
50S ribosomal protein L4 n=4 Tax=Clostridium butyricum RepID=B1QYH0_CLOBU
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
rplD; 50S ribosomal protein L4
L2_019_070G1_scaffold_28_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


2462..2758
DNA (297bp) protein (99aa)
50S ribosomal protein L23 n=4 Tax=Clostridium butyricum RepID=B1QYG9_CLOBU
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
rplW; 50S ribosomal protein L23
L2_019_070G1_scaffold_28_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


2823..3653
DNA (831bp) protein (277aa)
50S ribosomal protein L2 n=4 Tax=Clostridium butyricum RepID=B1QYG8_CLOBU
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
rplB; 50S ribosomal protein L2
L2_019_070G1_scaffold_28_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


3716..3988
DNA (273bp) protein (91aa)
30S ribosomal protein S19 n=4 Tax=Clostridium butyricum RepID=B1QYG7_CLOBU
30S ribosomal protein S19 {ECO:0000313|EMBL:KHD14883.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
rpsS; 30S ribosomal protein S19
L2_019_070G1_scaffold_28_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


4010..4345
DNA (336bp) protein (112aa)
50S ribosomal protein L22 n=4 Tax=Clostridium butyricum RepID=B1QYG6_CLOBU
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
rplV; 50S ribosomal protein L22
L2_019_070G1_scaffold_28_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


4369..5037
DNA (669bp) protein (223aa)
30S ribosomal protein S3 n=4 Tax=Clostridium butyricum RepID=B1QYG5_CLOBU
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
rpsC; 30S ribosomal protein S3
L2_019_070G1_scaffold_28_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


5055..5489
DNA (435bp) protein (145aa)
50S ribosomal protein L16 n=4 Tax=Clostridium butyricum RepID=B1QYG4_CLOBU
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
rplP; 50S ribosomal protein L16
L2_019_070G1_scaffold_28_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


5489..5701
DNA (213bp) protein (71aa)
50S ribosomal protein L29 n=4 Tax=Clostridium butyricum RepID=B1QYG3_CLOBU
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
50S ribosomal protein L29
L2_019_070G1_scaffold_28_12
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


5725..5979
DNA (255bp) protein (85aa)
30S ribosomal protein S17 n=4 Tax=Clostridium butyricum RepID=B1QYG2_CLOBU
rpsQ; 30S ribosomal protein S17
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
L2_019_070G1_scaffold_28_13
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


6007..6375
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=5 Tax=Clostridium RepID=U5MKC8_CLOSA
hypothetical protein
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
L2_019_070G1_scaffold_28_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


6391..6705
DNA (315bp) protein (105aa)
50S ribosomal protein L24 n=4 Tax=Clostridium butyricum RepID=B1QYG0_CLOBU
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
rplX; 50S ribosomal protein L24
L2_019_070G1_scaffold_28_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


6728..7267
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=4 Tax=Clostridium butyricum RepID=B1QYF9_CLOBU
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
rplE; 50S ribosomal protein L5
L2_019_070G1_scaffold_28_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


7284..7469
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=5 Tax=Clostridium RepID=U5MP94_CLOSA
rpsZ; 30S ribosomal protein S14 type Z
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
L2_019_070G1_scaffold_28_17
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


7502..7900
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=3 Tax=Clostridium butyricum RepID=B1QYF7_CLOBU
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
rpsH; 30S ribosomal protein S8
L2_019_070G1_scaffold_28_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


7971..8513
DNA (543bp) protein (181aa)
50S ribosomal protein L6 n=4 Tax=Clostridium butyricum RepID=B1QYF6_CLOBU
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
rplF; 50S ribosomal protein L6
L2_019_070G1_scaffold_28_19
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


8533..8892
DNA (360bp) protein (120aa)
50S ribosomal protein L18 n=4 Tax=Clostridium butyricum RepID=B1QYF5_CLOBU
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
rplR; 50S ribosomal protein L18
L2_019_070G1_scaffold_28_20
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


8912..9409
DNA (498bp) protein (166aa)
30S ribosomal protein S5 n=4 Tax=Clostridium butyricum RepID=B1QYF4_CLOBU
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
rpsE; 30S ribosomal protein S5
L2_019_070G1_scaffold_28_21
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


9423..9602
DNA (180bp) protein (60aa)
50S ribosomal protein L30 n=4 Tax=Clostridium butyricum RepID=B1QYF3_CLOBU
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
rpmD; 50S ribosomal protein L30
L2_019_070G1_scaffold_28_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


9624..10064
DNA (441bp) protein (147aa)
50S ribosomal protein L15 n=4 Tax=Clostridium butyricum RepID=B1QYF2_CLOBU
50S ribosomal protein L15 {ECO:0000313|EMBL:KHD14868.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
rplO; 50S ribosomal protein L15
L2_019_070G1_scaffold_28_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


10066..11352
DNA (1287bp) protein (429aa)
Protein translocase subunit SecY n=2 Tax=Clostridium butyricum RepID=B1QYF1_CLOBU
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
secY; protein translocase subunit SecY
L2_019_070G1_scaffold_28_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11378..12025
DNA (648bp) protein (216aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
adk; adenylate kinase Adk (EC:2.7.4.3)
Adenylate kinase n=4 Tax=Clostridium butyricum RepID=B1QYF0_CLOBU
L2_019_070G1_scaffold_28_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12025..12774
DNA (750bp) protein (250aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
map1; methionine aminopeptidase Map (EC:3.4.11.18)
Methionine aminopeptidase n=3 Tax=Clostridium butyricum RepID=B1QYE9_CLOBU
L2_019_070G1_scaffold_28_26
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13151..13369
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=14 Tax=Clostridium RepID=IF1_CLOB8
infA; translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L2_019_070G1_scaffold_28_27
Bacillus sp. BH072, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13424..13537
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=87 Tax=Firmicutes RepID=RL36_BACA2
rpmJ; 50S ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1570330 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. BH072.;"
L2_019_070G1_scaffold_28_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


13736..14104
DNA (369bp) protein (123aa)
30S ribosomal protein S13 n=4 Tax=Clostridium butyricum RepID=B1QYE5_CLOBU
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
rpsM; 30S ribosomal protein S13
L2_019_070G1_scaffold_28_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


14120..14515
DNA (396bp) protein (132aa)
UPI0003D65BB3 related cluster n=1 Tax=unknown RepID=UPI0003D65BB3
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
rpsK; 30S ribosomal protein S11
L2_019_070G1_scaffold_28_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


14543..15163
DNA (621bp) protein (207aa)
30S ribosomal protein S4 n=4 Tax=Clostridium butyricum RepID=B1QYE3_CLOBU
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
rpsD; 30S ribosomal protein S4
Displaying items 1-30 of 135 in total

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