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L2_019_070G1_scaffold_86

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_070G1_scaffold_86_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

173..1363
DNA (1191bp) protein (397aa)
Putative UDP-galactopyranose mutase n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MW55_BIFL1
UDP-galactopyranose mutase {ECO:0000313|EMBL:BAP84391.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
UDP-galactopyranose mutase
L2_019_070G1_scaffold_86_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1586..2797
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum E18 RepID=V6Y3A4_BIFLN
PF13828 domain protein {ECO:0000313|EMBL:BAP84390.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
hypothetical protein
L2_019_070G1_scaffold_86_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2900..3721
DNA (822bp) protein (274aa)
Fumarylacetoacetate hydrolase like protein n=3 Tax=Bifidobacterium longum RepID=S3E1U5_BIFLN
hydrolase
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase {ECO:0000313|EMBL:KEY20660.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_019_070G1_scaffold_86_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3794..3970)
DNA (177bp) protein (59aa)
Uncharacterized protein n=14 Tax=Bifidobacterium RepID=B3DPG8_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIJ29339.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L2_019_070G1_scaffold_86_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3967..4842)
DNA (876bp) protein (292aa)
IclR-type transcriptional regulator n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DPG9_BIFLD
IclR-type transcriptional regulator
IclR-type transcriptional regulator {ECO:0000313|EMBL:ACD99028.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_019_070G1_scaffold_86_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5097..6650
DNA (1554bp) protein (518aa)
Histidine ammonia-lyase {ECO:0000256|RuleBase:RU004479, ECO:0000256|SAAS:SAAS00083026}; EC=4.3.1.3 {ECO:0000256|RuleBase:RU004479, ECO:0000256|SAAS:SAAS00083026};; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
Histidine ammonia-lyase n=10 Tax=Bifidobacterium longum RepID=D6DCG5_BIFLN
histidine ammonia-lyase
L2_019_070G1_scaffold_86_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6869..9538
DNA (2670bp) protein (890aa)
Chaperone protein ClpB n=12 Tax=Bifidobacterium longum RepID=CLPB_BIFLO
Clp protease
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L2_019_070G1_scaffold_86_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9685..10794
DNA (1110bp) protein (370aa)
GltX2 n=9 Tax=Bacteria RepID=E4R2H8_BIFLM
gltX2; gltx2
Putative glutamyl-queuosine tRNA(Asp) synthetase {ECO:0000313|EMBL:EIJ23374.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_019_070G1_scaffold_86_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10820..11929
DNA (1110bp) protein (370aa)
Glycerophosphoryl diester phosphodiesterase n=9 Tax=Bifidobacterium longum RepID=D6ZWM8_BIFLJ
phosphodiesterase
Glycerophosphodiester phosphodiesterase {ECO:0000313|EMBL:KEY20655.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_019_070G1_scaffold_86_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12125..12604)
DNA (480bp) protein (160aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Ribosomal RNA large subunit methyltransferase H n=4 Tax=Bifidobacterium breve RepID=F6C8E4_BIFBA
Hypothetical protein
L2_019_070G1_scaffold_86_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12652..13293)
DNA (642bp) protein (214aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Uracil phosphoribosyltransferase n=7 Tax=Bifidobacterium RepID=UPP_BIFLD
upp; uracil phosphoribosyltransferase
L2_019_070G1_scaffold_86_12
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13597..14907
DNA (1311bp) protein (437aa)
Predicted ATPase (AAA+ superfamily) n=9 Tax=Bifidobacterium RepID=D6DCF9_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFV37010.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L2_019_070G1_scaffold_86_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15167..15841)
DNA (675bp) protein (225aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=C2GWL1_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:BAP84379.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
hypothetical protein
L2_019_070G1_scaffold_86_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15978..17177)
DNA (1200bp) protein (400aa)
MutT1 like protein n=1 Tax=Bifidobacterium longum D2957 RepID=S3DKA5_BIFLN
NTP pyrophosphohydrolase {ECO:0000313|EMBL:KHD95830.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
Phosphohistidine phosphatase SixA
L2_019_070G1_scaffold_86_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17335..19572)
DNA (2238bp) protein (746aa)
Polyphosphate kinase (EC:2.7.4.1)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
Polyphosphate kinase n=11 Tax=Bifidobacterium RepID=D6DCF6_BIFLN
L2_019_070G1_scaffold_86_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20077..21342
DNA (1266bp) protein (422aa)
Calcineurin-like phosphoesterase n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8ARN2_BIFLN
calcineurin-like phosphoesterase
Calcineurin-like phosphoesterase {ECO:0000313|EMBL:AEI96663.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L2_019_070G1_scaffold_86_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21515..22315)
DNA (801bp) protein (267aa)
Transcriptional regulator, IclR family, C-terminal domain protein n=5 Tax=Bifidobacterium RepID=C2GWL5_BIFLN
Transcriptional regulator, IclR family, C-terminal domain protein {ECO:0000313|EMBL:EEQ56043.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
transcriptional regulator
L2_019_070G1_scaffold_86_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22609..24012
DNA (1404bp) protein (468aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
3-isopropylmalate dehydratase large subunit n=14 Tax=Bifidobacterium RepID=LEUC_BIFLD
isopropylmalate isomerase large subunit
L2_019_070G1_scaffold_86_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24095..24787
DNA (693bp) protein (231aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031, ECO:0000313|EMBL:CBK70173.1};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
3-isopropylmalate dehydratase small subunit n=16 Tax=Bifidobacterium RepID=LEUD_BIFLD
isopropylmalate isomerase small subunit
L2_019_070G1_scaffold_86_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25270..26397
DNA (1128bp) protein (376aa)
Dihydroorotate oxidase n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5NE31_9BIFI
Diguanylate cyclase {ECO:0000313|EMBL:KEY20643.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
diguanylate cyclase
L2_019_070G1_scaffold_86_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26601..27947)
DNA (1347bp) protein (449aa)
NADH oxidase {ECO:0000313|EMBL:EEQ56038.1}; EC=1.6.99.3 {ECO:0000313|EMBL:EEQ56038.1};; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
Uncharacterized NAD(FAD)-dependent dehydrogenases n=15 Tax=Bifidobacterium RepID=D6DCE8_BIFLN
hcaD; hcad
L2_019_070G1_scaffold_86_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28197..29522
DNA (1326bp) protein (442aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|SAAS:SAAS00085344};; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
UDP-N-acetylglucosamine enolpyruvyl transferase n=14 Tax=Bifidobacterium RepID=B3DPI6_BIFLD
murA; mura
L2_019_070G1_scaffold_86_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29571..30824)
DNA (1254bp) protein (418aa)
Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities n=8 Tax=Bifidobacterium RepID=D6DCE7_BIFLN
aminotransferase
Probable aminotransferase {ECO:0000313|EMBL:AAN25069.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L2_019_070G1_scaffold_86_24
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30918..31850)
DNA (933bp) protein (311aa)
Transcriptional regulator n=10 Tax=Bifidobacterium RepID=D6DCE6_BIFLN
transcriptional regulator
Probable LysR-type transcriptional regulator {ECO:0000313|EMBL:CCY95423.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L2_019_070G1_scaffold_86_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31937..33214)
DNA (1278bp) protein (426aa)
Major Facilitator Superfamily n=3 Tax=Bifidobacterium RepID=D6DCE5_BIFLN
Major Facilitator Superfamily.
Putative macrolide efflux protein {ECO:0000313|EMBL:ESV34417.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
L2_019_070G1_scaffold_86_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33211..33876)
DNA (666bp) protein (222aa)
Acrr-type transcriptional regulator n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8ARP3_BIFLN
acrr-type transcriptional regulator
Acrr-type transcriptional regulator {ECO:0000313|EMBL:AEI96674.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L2_019_070G1_scaffold_86_27
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


34090..35952
DNA (1863bp) protein (621aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
Arginine--tRNA ligase n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XZG2_9BIFI
argS; arginyl-tRNA synthetase
L2_019_070G1_scaffold_86_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35949..37547
DNA (1599bp) protein (533aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120};; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
Diaminopimelate decarboxylase n=3 Tax=Bifidobacterium longum RepID=Q8G4V1_BIFLO
lysA; diaminopimelate decarboxylase
L2_019_070G1_scaffold_86_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37708..39024
DNA (1317bp) protein (439aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
Homoserine dehydrogenase n=2 Tax=Bifidobacterium RepID=C5EDD6_BIFLI
homoserine dehydrogenase
L2_019_070G1_scaffold_86_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

39131..40243
DNA (1113bp) protein (371aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Homoserine kinase n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GWM8_BIFLN
homoserine kinase
Displaying items 1-30 of 49 in total

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