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L2_019_070G1_scaffold_114

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_070G1_scaffold_114_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(135..356)
DNA (222bp) protein (74aa)
Amidohydrolase n=6 Tax=Bifidobacterium longum RepID=F8AQH7_BIFLN
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:KHD94340.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
L2_019_070G1_scaffold_114_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(487..1107)
DNA (621bp) protein (207aa)
ADP-ribose pyrophosphatase n=15 Tax=Bifidobacterium RepID=B3DS30_BIFLD
ADP-ribose pyrophosphatase
NUDIX hydrolase {ECO:0000313|EMBL:ACJ52509.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_019_070G1_scaffold_114_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1209..1784)
DNA (576bp) protein (192aa)
Preprotein translocase subunit n=6 Tax=Bifidobacterium longum RepID=B3DS31_BIFLD
hypothetical protein
Preprotein translocase subunit {ECO:0000313|EMBL:ACD97950.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_019_070G1_scaffold_114_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1883..2104)
DNA (222bp) protein (74aa)
Truncated stage III sporulation protein J (SpoIIIJ) homolog n=14 Tax=Bifidobacterium RepID=Q8CY53_BIFLO
hypothetical protein
60Kd inner membrane domain protein {ECO:0000313|EMBL:EIJ26068.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_019_070G1_scaffold_114_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2112..2267
DNA (156bp) protein (52aa)
Uncharacterized protein n=13 Tax=Bifidobacterium RepID=C2GX71_BIFLN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ71101.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L2_019_070G1_scaffold_114_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2299..2931
DNA (633bp) protein (211aa)
Major Facilitator Superfamily n=15 Tax=Bifidobacterium RepID=D6DDG2_BIFLN
transport protein
Putative permease {ECO:0000313|EMBL:ACD97952.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_019_070G1_scaffold_114_7
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3162..4826
DNA (1665bp) protein (555aa)
APC family amino acid-polyamine-organocation transporter n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5NGT3_9BIFI
APC family amino acid-polyamine-organocation transporter {ECO:0000313|EMBL:CCY96501.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
Amino acid transporters
L2_019_070G1_scaffold_114_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4720..5481)
DNA (762bp) protein (254aa)
Putative amino acid permease rocC n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZU82_BIFLJ
Putative amino acid permease RocC {ECO:0000313|EMBL:KFI71755.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L2_019_070G1_scaffold_114_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5820..6470)
DNA (651bp) protein (217aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
Signal peptidase I n=4 Tax=Bifidobacterium longum subsp. longum RepID=I3AUC6_BIFLN
signal peptidase
L2_019_070G1_scaffold_114_10
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6548..6976)
DNA (429bp) protein (143aa)
Uncharacterized protein n=14 Tax=Bifidobacterium RepID=B3DS37_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY96499.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L2_019_070G1_scaffold_114_11
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7297..8253
DNA (957bp) protein (319aa)
Uncharacterized protein n=9 Tax=Bifidobacterium RepID=Q8G668_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY96498.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L2_019_070G1_scaffold_114_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8309..8998
DNA (690bp) protein (230aa)
Uncharacterized protein n=4 Tax=Bifidobacterium longum RepID=Q8G667_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN24597.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L2_019_070G1_scaffold_114_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9368..10558
DNA (1191bp) protein (397aa)
Aspartate/tyrosine/aromatic aminotransferase n=16 Tax=Bifidobacterium RepID=B3DS49_BIFLD
aspartate aminotransferase
Aspartate aminotransferase {ECO:0000313|EMBL:AIW43755.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_019_070G1_scaffold_114_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10598..12361
DNA (1764bp) protein (588aa)
Uncharacterized protein n=15 Tax=Bifidobacterium RepID=B3DS50_BIFLD
carbohydrate kinase
Carbohydrate kinase {ECO:0000313|EMBL:AIW43754.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_019_070G1_scaffold_114_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12358..13092
DNA (735bp) protein (245aa)
Hydrolase n=16 Tax=Bifidobacterium RepID=F8AQJ0_BIFLN
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:EEI80195.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
hydrolase
L2_019_070G1_scaffold_114_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13194..14117
DNA (924bp) protein (308aa)
Fhu operon transcription regulator n=17 Tax=Bifidobacterium RepID=B3DS52_BIFLD
transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:KEY32929.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L2_019_070G1_scaffold_114_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14272..15393)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=7 Tax=Bifidobacterium RepID=Q8G662_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESV33520.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
L2_019_070G1_scaffold_114_18
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15608..15760)
DNA (153bp) protein (51aa)
Uncharacterized protein n=10 Tax=Bifidobacterium RepID=C2GX52_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY96491.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L2_019_070G1_scaffold_114_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15869..16564)
DNA (696bp) protein (232aa)
orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Orotate phosphoribosyltransferase n=15 Tax=Bifidobacterium RepID=PYRE_BIFLO
L2_019_070G1_scaffold_114_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16573..17559)
DNA (987bp) protein (329aa)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
dihydroorotate oxidase B, catalytic subunit (EC:1.3.98.1)
Dihydroorotate dehydrogenase n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6DDH4_BIFLN
L2_019_070G1_scaffold_114_21
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17547..18371)
DNA (825bp) protein (275aa)
2-polyprenylphenol hydroxylase n=16 Tax=Bifidobacterium RepID=B3DS57_BIFLD
ubiB; ubib
Oxidoreductase NAD-binding domain-containing protein {ECO:0000313|EMBL:EFV36833.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L2_019_070G1_scaffold_114_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18507..19460)
DNA (954bp) protein (318aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032256}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032220};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
Orotidine 5'-phosphate decarboxylase n=10 Tax=Bifidobacterium RepID=B3DS58_BIFLD
orotidine 5'-phosphate decarboxylase
L2_019_070G1_scaffold_114_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19478..20974)
DNA (1497bp) protein (499aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
Dihydroorotase n=11 Tax=Bifidobacterium RepID=E4R3N7_BIFLM
pyrC; pyrc
L2_019_070G1_scaffold_114_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20971..21390)
DNA (420bp) protein (140aa)
Aspartate carbamoyltransferase regulatory chain, allosteric domain / aspartate carbamoyltransferase regulatory chain, metal-binding domain multi-domain protein {ECO:0000313|EMBL:EIJ30556.1}; EC=2.1.3.2 {ECO:0000313|EMBL:EIJ30556.1};; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
Aspartate carbamoyltransferase regulatory chain n=16 Tax=Bifidobacterium RepID=PYRI_BIFLO
aspartate carbamoyltransferase regulatory subunit
L2_019_070G1_scaffold_114_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21390..22352)
DNA (963bp) protein (321aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
Aspartate carbamoyltransferase n=14 Tax=Bifidobacterium RepID=PYRB_BIFLD
aspartate carbamoyltransferase catalytic subunit
L2_019_070G1_scaffold_114_26
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22494..25724)
DNA (3231bp) protein (1077aa)
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015000}; EC=2.7.7.42 {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015004};; Glutamine-synthase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; [Glutamate--ammonia-ligase] adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
Glutamate-ammonia-ligase adenylyltransferase n=9 Tax=Bifidobacterium RepID=GLNE_BIFLD
glutamine-synthetase adenylyltransferase
L2_019_070G1_scaffold_114_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25780..26784)
DNA (1005bp) protein (335aa)
Penicillin V acylase and related amidases (EC:3.5.1.24)
Penicillin V acylase and related amidases {ECO:0000313|EMBL:CBK70551.1}; EC=3.5.1.24 {ECO:0000313|EMBL:CBK70551.1};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Penicillin V acylase and related amidases n=14 Tax=Bifidobacterium RepID=D6DDI0_BIFLN
L2_019_070G1_scaffold_114_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26867..27721)
DNA (855bp) protein (285aa)
5,10-methylenetetrahydrofolate reductase, prokaryotic form (EC:1.5.1.20)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
Methylenetetrahydrofolate reductase n=12 Tax=Bifidobacterium RepID=B3DS64_BIFLD
L2_019_070G1_scaffold_114_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27780..30083)
DNA (2304bp) protein (768aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00049969}; EC=2.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00050077};; Cobalamin-independent methionine synthase {ECO:0000256|HAMAP-Rule:MF_00172}; Methionine synthase, vitamin-B12 independent isozyme {ECO:0000256|HAMAP-Rule:MF_00172}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=8 Tax=Bifidobacterium longum RepID=METE_BIFLD
metE; mete
L2_019_070G1_scaffold_114_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30194..30751)
DNA (558bp) protein (186aa)
Phosphohistidine phosphatase n=13 Tax=Bifidobacterium RepID=B3DS66_BIFLD
phosphoglycerate
Phosphoglycerate mutase {ECO:0000313|EMBL:AIW43739.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
Displaying items 1-30 of 45 in total

View Taxonomy