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L2_019_070G1_scaffold_145

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_070G1_scaffold_145_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..68
DNA (66bp) protein (22aa)
Transposase for IS3509a n=3 Tax=Bifidobacterium longum RepID=B7GP90_BIFLS
transposase
Uncharacterized protein {ECO:0000313|EMBL:EIJ21426.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_019_070G1_scaffold_145_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

407..988
DNA (582bp) protein (194aa)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146, ECO:0000313|EMBL:CBK71390.1};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Deoxycytidine triphosphate deaminase n=18 Tax=Bifidobacterium RepID=DCD_BIFLD
deoxycytidine triphosphate deaminase
L2_019_070G1_scaffold_145_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1051..2781
DNA (1731bp) protein (577aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=V6XYR9_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:ESV34460.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
hypothetical protein
L2_019_070G1_scaffold_145_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3017..6004)
DNA (2988bp) protein (996aa)
Cation transport ATPase n=7 Tax=Bacteria RepID=D6DB35_BIFLN
Cation transport ATPase
Cation-transporting ATPase PacL {ECO:0000313|EMBL:AAN24504.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L2_019_070G1_scaffold_145_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6187..7017)
DNA (831bp) protein (277aa)
Esterase/lipase n=8 Tax=Bifidobacterium RepID=B3DP61_BIFLD
Acetyl esterase {ECO:0000313|EMBL:KEY33242.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
xylan esterase
L2_019_070G1_scaffold_145_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7096..8394)
DNA (1299bp) protein (433aa)
Transport protein n=5 Tax=Bifidobacterium RepID=E8MFT2_BIFL2
transport protein
Transport protein {ECO:0000313|EMBL:BAJ67559.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L2_019_070G1_scaffold_145_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8482..9474
DNA (993bp) protein (331aa)
rRNA methylase n=17 Tax=Bifidobacterium RepID=B3DP59_BIFLD
RNA methyltransferase
RNA methyltransferase {ECO:0000313|EMBL:KEY24089.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_019_070G1_scaffold_145_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9581..10978)
DNA (1398bp) protein (466aa)
Lipopolysaccharide kinase (Kdo/WaaP) family n=10 Tax=Bacteria RepID=D6DB32_BIFLN
Lipopolysaccharide kinase {ECO:0000313|EMBL:BAP84509.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
Lipopolysaccharide kinase (Kdo/WaaP) family.
L2_019_070G1_scaffold_145_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11215..12342)
DNA (1128bp) protein (376aa)
Carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-) n=10 Tax=Bifidobacterium longum RepID=D6DB27_BIFLN
malK; malk
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EIJ21420.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_019_070G1_scaffold_145_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12701..13876)
DNA (1176bp) protein (392aa)
Putative glycosyltransferase n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5NEJ2_9BIFI
glycosyl transferase
Glycosyl transferase {ECO:0000313|EMBL:AIW43069.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_019_070G1_scaffold_145_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13940..14932)
DNA (993bp) protein (331aa)
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Ribonucleoside-diphosphate reductase subunit beta n=2 Tax=Bifidobacterium longum subsp. longum RepID=F8APH4_BIFLN
ribonucleotide-diphosphate reductase subunit beta
L2_019_070G1_scaffold_145_12
unknown

Not on your lists

comp(14948..15037)
DNA (90bp) protein (30aa)

This feature has no annotations

L2_019_070G1_scaffold_145_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15158..17353)
DNA (2196bp) protein (732aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410, ECO:0000313|EMBL:CBK71376.1};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Ribonucleoside-diphosphate reductase n=8 Tax=Bacteria RepID=B3DP48_BIFLD
ribonucleoside-diphosphate reductase subunit alpha
L2_019_070G1_scaffold_145_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17469..17927)
DNA (459bp) protein (153aa)
Protein NrdI n=7 Tax=Bifidobacterium longum RepID=B3DP47_BIFLD
ribonucleotide reductase
Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L2_019_070G1_scaffold_145_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17924..18190)
DNA (267bp) protein (89aa)
Ribonucleoside-diphosphate reductase class Ib glutaredoxin subunit {ECO:0000313|EMBL:CBK71375.1}; EC=1.17.4.1 {ECO:0000313|EMBL:CBK71375.1};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Glutaredoxin-like protein NrdH n=19 Tax=Bifidobacterium RepID=Q8G6H3_BIFLO
glutaredoxin
L2_019_070G1_scaffold_145_16
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18778..19428)
DNA (651bp) protein (217aa)
Helix-turn-helix protein n=4 Tax=Bifidobacterium RepID=E5XXP5_9BIFI
transcriptional regulator
Helix-turn-helix protein {ECO:0000313|EMBL:EFV37617.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L2_019_070G1_scaffold_145_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19409..20092)
DNA (684bp) protein (228aa)
Ribosomal protein L1 n=2 Tax=Bifidobacterium longum RepID=S3DQJ2_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW43075.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_019_070G1_scaffold_145_18
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20254..21054
DNA (801bp) protein (267aa)
Kch n=9 Tax=Bifidobacterium RepID=E4R1Q5_BIFLM
Potassium transport protein {ECO:0000313|EMBL:CCY95569.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
potassium transport protein
L2_019_070G1_scaffold_145_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21247..22353
DNA (1107bp) protein (369aa)
Uncharacterized protein n=11 Tax=Bifidobacterium longum RepID=Q8G6H8_BIFLO
hypothetical protein
ATPase AAA {ECO:0000313|EMBL:KEY24078.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_019_070G1_scaffold_145_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22939..25179
DNA (2241bp) protein (747aa)
Serine/threonine protein kinase n=1 Tax=Bifidobacterium longum E18 RepID=V6Y114_BIFLN
Kinase domain protein {ECO:0000313|EMBL:EEI80375.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
hypothetical protein
L2_019_070G1_scaffold_145_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25357..26334
DNA (978bp) protein (326aa)
Uncharacterized protein n=7 Tax=Bifidobacterium RepID=Q8G6I1_BIFLO
DSBA oxidoreductase
DSBA oxidoreductase {ECO:0000313|EMBL:AIW43078.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_019_070G1_scaffold_145_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26853..28340
DNA (1488bp) protein (496aa)
Putative secreted protein with G5 and DUF348 domain n=1 Tax=Bifidobacterium longum E18 RepID=V6XZ60_BIFLN
lytic transglycosylase
Lytic transglycosylase {ECO:0000313|EMBL:AIW43079.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_019_070G1_scaffold_145_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


28373..29299
DNA (927bp) protein (309aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZX39_BIFLJ
ksgA; dimethyladenosine transferase
L2_019_070G1_scaffold_145_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29296..30246
DNA (951bp) protein (317aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=10 Tax=Bifidobacterium RepID=ISPE_BIFLO
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
L2_019_070G1_scaffold_145_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30293..30922
DNA (630bp) protein (210aa)
Uncharacterized protein n=14 Tax=Bifidobacterium RepID=B3DP36_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD98895.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_019_070G1_scaffold_145_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31007..32422)
DNA (1416bp) protein (472aa)
Putative RNA nucleotidyltransferase n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MWG7_BIFL1
RNA nucleotidyltransferase
Putative RNA nucleotidyltransferase {ECO:0000313|EMBL:BAJ72111.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L2_019_070G1_scaffold_145_27
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32509..33801
DNA (1293bp) protein (431aa)
ADP-ribose pyrophosphatase n=2 Tax=Bifidobacterium RepID=E4R1P5_BIFLM
ADP-ribose pyrophosphatase
NUDIX domain-containing protein {ECO:0000313|EMBL:EFV37628.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L2_019_070G1_scaffold_145_28
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33798..36068
DNA (2271bp) protein (757aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5NFK8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY96126.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
hypothetical protein
L2_019_070G1_scaffold_145_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36065..36733
DNA (669bp) protein (223aa)
Integral membrane protein MviN n=8 Tax=Bifidobacterium RepID=E5XXQ8_9BIFI
hypothetical protein
Putative membrane spanning protein {ECO:0000313|EMBL:BAP84536.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L2_019_070G1_scaffold_145_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36754..37638
DNA (885bp) protein (295aa)
Integral membrane protein MviN n=8 Tax=Bifidobacterium RepID=E5XXQ8_9BIFI
hypothetical protein
Virulence factor MVIN {ECO:0000313|EMBL:EIJ28036.1}; Flags: Fragment;; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
Displaying items 1-30 of 53 in total

View Taxonomy