ggKbase home page

L2_019_070G1_scaffold_182

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_070G1_scaffold_182_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..983
DNA (981bp) protein (327aa)
integrase n=1 Tax=Coprobacillus sp. D6 RepID=UPI0002D2BDFB
site-specific recombinase, phage integrase family
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:AEF27989.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_019_070G1_scaffold_182_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1055..1708)
DNA (654bp) protein (218aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=D4BPT1_BIFBR
putative secreted protein
Putative secreted protein {ECO:0000313|EMBL:AHJ19422.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L2_019_070G1_scaffold_182_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2347..2682
DNA (336bp) protein (112aa)
Fic/DOC domain protein n=6 Tax=Bifidobacterium RepID=I3AUD9_BIFLN
hypothetical protein
Fic/DOC domain protein {ECO:0000313|EMBL:EIJ26076.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_019_070G1_scaffold_182_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2885..3169)
DNA (285bp) protein (95aa)
Uncharacterized protein n=6 Tax=Bifidobacterium RepID=I3AUE3_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIJ30536.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L2_019_070G1_scaffold_182_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3186..3521)
DNA (336bp) protein (112aa)
RelE/StbE family addiction module toxin n=6 Tax=Bifidobacterium RepID=E5XZW1_9BIFI
hypothetical protein
Addiction module toxin, RelE/StbE family {ECO:0000313|EMBL:EIJ30510.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L2_019_070G1_scaffold_182_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3525..3812)
DNA (288bp) protein (96aa)
Addiction module antitoxin, RelB/DinJ family n=4 Tax=Bifidobacterium breve RepID=D4BPQ3_BIFBR
Addiction module antitoxin, RelB/DinJ family {ECO:0000313|EMBL:ERI86083.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
RelB/DinJ family addiction module antitoxin
L2_019_070G1_scaffold_182_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3979..5187)
DNA (1209bp) protein (403aa)
Efflux ABC transporter, permease protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E1E6_BIFBR
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:ERI86081.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
hypothetical protein
L2_019_070G1_scaffold_182_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5145..5825)
DNA (681bp) protein (227aa)
ABC transporter related n=10 Tax=Bifidobacterium RepID=B7GRQ2_BIFLS
ATP-binding protein of ABC transporter system
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EIJ26080.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_019_070G1_scaffold_182_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5822..6712)
DNA (891bp) protein (297aa)
Uncharacterized protein n=6 Tax=Bifidobacterium RepID=I3AUE1_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIJ26077.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_019_070G1_scaffold_182_10
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6709..7227)
DNA (519bp) protein (173aa)
Putative uncharacterized protein n=2 Tax=Bifidobacterium RepID=E8MTM2_BIFL1
Uncharacterized protein {ECO:0000313|EMBL:EFV36861.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
hypothetical protein
L2_019_070G1_scaffold_182_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7350..8045
DNA (696bp) protein (232aa)
Transcriptional regulator, LuxR family n=12 Tax=Bifidobacterium RepID=F6C9B7_BIFBA
Two-component response regulator
Response regulator receiver domain protein {ECO:0000313|EMBL:EIJ26083.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_019_070G1_scaffold_182_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8021..9184
DNA (1164bp) protein (388aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=D4BPP6_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI86076.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
histidine protein kinase
L2_019_070G1_scaffold_182_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9585..9818)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3KZW5_BIFBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH00462.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L2_019_070G1_scaffold_182_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10131..10460
DNA (330bp) protein (110aa)
Uncharacterized protein n=15 Tax=Bifidobacterium RepID=B3DS23_BIFLD
Conserved hypothetical membrane spanning protein
Uncharacterized protein {ECO:0000313|EMBL:AEF27988.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_019_070G1_scaffold_182_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10596..11129
DNA (534bp) protein (178aa)
Predicted acetyltransferase n=12 Tax=Bifidobacterium RepID=D6DDF2_BIFLN
GNAT family acetyltransferase
Uncharacterized protein {ECO:0000313|EMBL:EPD74964.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L2_019_070G1_scaffold_182_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11510..12025)
DNA (516bp) protein (172aa)
Uncharacterized protein n=7 Tax=Bifidobacterium RepID=Q8G682_BIFLO
acetyltransferase
GNAT family acetyltransferase {ECO:0000313|EMBL:AIW43763.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_019_070G1_scaffold_182_17
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12204..12662
DNA (459bp) protein (153aa)
Uncharacterized protein n=11 Tax=Bifidobacterium RepID=B3DS19_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY96518.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L2_019_070G1_scaffold_182_18
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12724..12993
DNA (270bp) protein (90aa)
Uncharacterized protein n=4 Tax=Bifidobacterium RepID=B3DS18_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY96519.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L2_019_070G1_scaffold_182_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13056..13349
DNA (294bp) protein (98aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=T2I0V4_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCK34979.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
L2_019_070G1_scaffold_182_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13583..14713
DNA (1131bp) protein (377aa)
VanZ n=8 Tax=Bifidobacterium longum RepID=E4R3A7_BIFLM
VanZ-like protein {ECO:0000313|EMBL:EEQ55222.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
teicoplanin resistance protein VanZ
L2_019_070G1_scaffold_182_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15017..15640
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum 44B RepID=I3BKG7_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EIJ31860.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
hypothetical protein
L2_019_070G1_scaffold_182_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15514..15825)
DNA (312bp) protein (104aa)
Amino acid permease n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GX94_BIFLN
Amino acid permease
Amino acid permease {ECO:0000313|EMBL:EFE89621.1}; Amino acid transport protein {ECO:0000313|EMBL:BAR00036.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L2_019_070G1_scaffold_182_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15949..16800
DNA (852bp) protein (284aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
Probable endonuclease 4 n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R3A5_BIFLM
nfo; nfo
L2_019_070G1_scaffold_182_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17327..19414
DNA (2088bp) protein (696aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|SAAS:SAAS00046689}; EC=4.1.1.48 {ECO:0000256|SAAS:SAAS00046705};; EC=4.2.1.20 {ECO:0000256|SAAS:SAAS00015859};; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
TrpB/TrpC bifunctional protein, includes tryptophan synthase beta chain and indole-3-glycerol phosphate synthase n=1 Tax=Bifidobacterium longum E18 RepID=V6XYH9_BIFLN
trpBC; trpbc
L2_019_070G1_scaffold_182_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19438..20307
DNA (870bp) protein (290aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00031177}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00108586};; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
Tryptophan synthase alpha chain n=8 Tax=Bifidobacterium RepID=E8MTP2_BIFL1
tryptophan synthase subunit alpha
L2_019_070G1_scaffold_182_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20420..21367
DNA (948bp) protein (316aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
Prolipoprotein diacylglyceryl transferase n=16 Tax=Bifidobacterium RepID=LGT_BIFLO
prolipoprotein diacylglyceryl transferase
L2_019_070G1_scaffold_182_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21443..22111
DNA (669bp) protein (223aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Ribulose-phosphate 3-epimerase n=6 Tax=Bifidobacterium RepID=E4R3A0_BIFLM
rpe; rpe
L2_019_070G1_scaffold_182_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22174..22437
DNA (264bp) protein (88aa)
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071052}; Short=PRA-PH {ECO:0000256|HAMAP-Rule:MF_01020};; EC=3.6.1.31 {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071044};; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
Phosphoribosyl-ATP pyrophosphatase n=19 Tax=Bifidobacterium RepID=HIS2_BIFLD
phosphoribosyl-ATP pyrophosphatase
L2_019_070G1_scaffold_182_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22449..23300
DNA (852bp) protein (284aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302};; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
ATP phosphoribosyltransferase n=4 Tax=Bifidobacterium longum RepID=F8AQD6_BIFLN
hisG; hisg
L2_019_070G1_scaffold_182_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23314..23931
DNA (618bp) protein (206aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase n=7 Tax=Bifidobacterium RepID=E8MTP7_BIFL1
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase {ECO:0000313|EMBL:BAJ71141.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
Displaying items 1-30 of 40 in total

View Taxonomy