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L2_019_070G1_scaffold_211

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_070G1_scaffold_211_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(449..1096)
DNA (648bp) protein (216aa)
Pyridoxal 5'-phosphate synthase subunit PdxT {ECO:0000256|HAMAP-Rule:MF_01615}; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01615};; Pdx2 {ECO:0000256|HAMAP-Rule:MF_01615}; Pyridoxal 5'-phosphate synthase glutaminase subunit {ECO:0000256|HAMAP-Rule:MF_01615}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
pdxT; glutamine amidotransferase subunit PdxT (EC:2.6.-.-)
UPI0003D5E257 related cluster n=1 Tax=unknown RepID=UPI0003D5E257
L2_019_070G1_scaffold_211_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1053..1973)
DNA (921bp) protein (307aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1 {ECO:0000256|HAMAP-Rule:MF_01824}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
pdxS; pyridoxal biosynthesis lyase PdxS (EC:4.-.-.-)
UPI0003D5CC07 related cluster n=1 Tax=unknown RepID=UPI0003D5CC07
L2_019_070G1_scaffold_211_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2179..3585)
DNA (1407bp) protein (469aa)
UPI0003D62D45 related cluster n=1 Tax=unknown RepID=UPI0003D62D45
Aryl-phospho-beta-D-glucosidase {ECO:0000313|EMBL:KHD13400.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
beta-galactosidase
L2_019_070G1_scaffold_211_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3729..4445)
DNA (717bp) protein (239aa)
UPI0003D60EA3 related cluster n=1 Tax=unknown RepID=UPI0003D60EA3
GntR family transcriptional regulator {ECO:0000313|EMBL:KHD13399.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
GntR family transcriptional regulator
L2_019_070G1_scaffold_211_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4624..5934)
DNA (1311bp) protein (437aa)
UPI0003D65882 related cluster n=1 Tax=unknown RepID=UPI0003D65882
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
PTS system lactose/cellobiose family IIC subunit
L2_019_070G1_scaffold_211_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6107..6412)
DNA (306bp) protein (102aa)
PTS system, cellobiose-specific IIB component {ECO:0000313|EMBL:KJZ85656.1}; EC=2.7.1.69 {ECO:0000313|EMBL:KJZ85656.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
celA5; cellobiose-specific phosphotransferase enzyme IIB component CelA (EC:2.7.1.69)
Lichenan-specific phosphotransferase enzyme iib component n=4 Tax=Clostridium butyricum RepID=B1QTF4_CLOBU
L2_019_070G1_scaffold_211_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6479..6802)
DNA (324bp) protein (108aa)
phosphotransferase system cellobiose-specific component IIA (EC:2.7.1.69)
Lichenan-specific phosphotransferase enzyme iia component n=4 Tax=Clostridium butyricum RepID=B1QTF5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85657.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L2_019_070G1_scaffold_211_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7056..8015)
DNA (960bp) protein (320aa)
Methyltransferase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K116_CLOBU
RNA methyltransferase {ECO:0000313|EMBL:KHD13395.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
DNA methylase N-4/N-6 domain protein
L2_019_070G1_scaffold_211_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8205..8387)
DNA (183bp) protein (61aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QTF7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30260.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_019_070G1_scaffold_211_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8595..9326)
DNA (732bp) protein (244aa)
UPI0003D6542D related cluster n=1 Tax=unknown RepID=UPI0003D6542D
Transferase {ECO:0000313|EMBL:KHD13403.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hexapeptide repeat-containing transferase
L2_019_070G1_scaffold_211_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9593..9934)
DNA (342bp) protein (114aa)
UPI0003A1FE67 related cluster n=1 Tax=unknown RepID=UPI0003A1FE67
Uncharacterized protein {ECO:0000313|EMBL:KHD13393.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
L2_019_070G1_scaffold_211_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10006..10344)
DNA (339bp) protein (113aa)
Alkylphosphonate utilization operon protein PhnA n=4 Tax=Clostridium butyricum RepID=B1QTG0_CLOBU
Alkylphosphonate utilization operon protein PhnA {ECO:0000313|EMBL:EEP52411.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
phnA family protein
L2_019_070G1_scaffold_211_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10560..11558)
DNA (999bp) protein (333aa)
UPI0003D66D25 related cluster n=1 Tax=unknown RepID=UPI0003D66D25
Phosphate permease {ECO:0000313|EMBL:ETI91535.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
phosphate permease
L2_019_070G1_scaffold_211_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11551..12174)
DNA (624bp) protein (208aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1QTG2_CLOBU
Phosphate transport regulator (Distant of PhoU) {ECO:0000313|EMBL:KJZ85661.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_019_070G1_scaffold_211_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12571..13074)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J5E7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85647.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_019_070G1_scaffold_211_16
Acinetobacter baumannii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13241..15025)
DNA (1785bp) protein (595aa)
Uncharacterized protein (Fragment) n=1 Tax=Crocosphaera watsonii WH 0003 RepID=G5J9P5_CROWT
Uncharacterized protein {ECO:0000313|EMBL:KDM53011.1}; TaxID=1439317 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii complex.;" source="Acinetobacter baumanii BIDMC 57.;"
hypothetical protein
L2_019_070G1_scaffold_211_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15158..15637)
DNA (480bp) protein (160aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
UPI0003D658AB related cluster n=2 Tax=unknown RepID=UPI0003D658AB
rRNA large subunit methyltransferase
L2_019_070G1_scaffold_211_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15845..16348)
DNA (504bp) protein (168aa)
SEC-C domain protein n=4 Tax=Clostridium butyricum RepID=B1QTG6_CLOBU
Protein export cytoplasm protein SecA ATPase RNA helicase {ECO:0000313|EMBL:KJZ85641.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_019_070G1_scaffold_211_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16406..17197)
DNA (792bp) protein (264aa)
yycJ; putative metallo-hydrolase YycJ (EC:3.-.-.-)
Metallo-beta-lactamase family protein n=2 Tax=Clostridium butyricum RepID=B1QTG7_CLOBU
Beta-lactamase domain protein {ECO:0000313|EMBL:EEP52429.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
L2_019_070G1_scaffold_211_20
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17224..18489)
DNA (1266bp) protein (422aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=4 Tax=Clostridium butyricum RepID=B1QTG8_CLOBU
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
L2_019_070G1_scaffold_211_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18973..19512
DNA (540bp) protein (180aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QTG9_CLOBU
No significant y {ECO:0000313|EMBL:KJZ85666.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_019_070G1_scaffold_211_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19732..20205
DNA (474bp) protein (158aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QTH0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30248.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_019_070G1_scaffold_211_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20357..20788
DNA (432bp) protein (144aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QTH1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30247.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_019_070G1_scaffold_211_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20805..21620
DNA (816bp) protein (272aa)
Beta-lactamase domain protein n=2 Tax=Clostridium butyricum RepID=C4IMU9_CLOBU
Beta-lactamase domain protein {ECO:0000313|EMBL:EEP52446.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
fold6; putative Zn-dependent hydrolase of the beta-lactamase Fold protein
L2_019_070G1_scaffold_211_25
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21698..22903
DNA (1206bp) protein (402aa)
UPI0003D61B61 related cluster n=1 Tax=unknown RepID=UPI0003D61B61
Phosphate transport regulator {ECO:0000313|EMBL:KJZ85056.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
peptidase S8/S53 subtilisin kexin sedolisin
L2_019_070G1_scaffold_211_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23110..24102
DNA (993bp) protein (331aa)
DNA replication protein DnaD n=2 Tax=Clostridium butyricum RepID=B1QTH4_CLOBU
Primosome, DnaD subunit {ECO:0000313|EMBL:EEP52420.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
DnaD-like protein
L2_019_070G1_scaffold_211_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24092..25075
DNA (984bp) protein (328aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=R0A1A2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30243.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
DNA replication protein
Displaying 27 items

View Taxonomy