ggKbase home page

L2_019_070G1_scaffold_266

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_070G1_scaffold_266_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..505)
DNA (504bp) protein (168aa)
Uncharacterized protein n=4 Tax=Escherichia coli RepID=H8DGH3_ECOLX
yjfK; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQP43967.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L2_019_070G1_scaffold_266_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(555..1253)
DNA (699bp) protein (233aa)
PspA/IM30 family protein n=41 Tax=Escherichia coli RepID=B3HNP3_ECOLX
phage shock protein A
Transcriptional regulator effector protein {ECO:0000313|EMBL:EQP43966.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L2_019_070G1_scaffold_266_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1272..1673)
DNA (402bp) protein (134aa)
Uncharacterized protein n=429 Tax=Enterobacteriaceae RepID=J7R996_ECOLX
yjfI; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK75058.1}; TaxID=749532 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 78-1.;"
L2_019_070G1_scaffold_266_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1800..2531)
DNA (732bp) protein (244aa)
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB {ECO:0000256|HAMAP-Rule:MF_01887}; EC=2.1.1.185 {ECO:0000256|HAMAP-Rule:MF_01887};; 23S rRNA (guanosine2251 2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01887}; 23S rRNA Gm2251 2'-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01887}; TaxID=1125638 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP020980.1.;"
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB n=1351 Tax=Enterobacteriaceae RepID=RLMB_ECO57
yjfH; 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB
L2_019_070G1_scaffold_266_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2622..5063)
DNA (2442bp) protein (814aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
Ribonuclease R n=6 Tax=Escherichia coli RepID=T6GGX8_ECOLX
ribonuclease R
L2_019_070G1_scaffold_266_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5102..5527)
DNA (426bp) protein (142aa)
HTH-type transcriptional repressor NsrR n=1034 Tax=Enterobacteriaceae RepID=NSRR_ECO27
transcriptional repressor NsrR
HTH-type transcriptional repressor NsrR {ECO:0000256|HAMAP-Rule:MF_01177, ECO:0000256|SAAS:SAAS00010440}; TaxID=1444165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C2.;"
L2_019_070G1_scaffold_266_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5732..7030)
DNA (1299bp) protein (433aa)
purA; adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H299.;"
Adenylosuccinate synthetase n=1229 Tax=Bacteria RepID=PURA_ECO24
L2_019_070G1_scaffold_266_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7134..7331)
DNA (198bp) protein (66aa)
Uncharacterized protein YjeT n=1249 Tax=Enterobacteriaceae RepID=YJET_ECO57
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEO20565.1}; TaxID=1444212 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S4_C1.;"
L2_019_070G1_scaffold_266_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7413..8417)
DNA (1005bp) protein (335aa)
Modulator of FtsH protease HflC n=1420 Tax=Bacteria RepID=HFLC_ECO57
hflC; modulator for HflB protease specific for phage lambda CII repressor
Modulator of FtsH protease HflC {ECO:0000256|PIRNR:PIRNR005651}; TaxID=1444153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C2.;"
L2_019_070G1_scaffold_266_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8420..9679)
DNA (1260bp) protein (420aa)
Protein HflK n=7 Tax=Escherichia coli RepID=L5HXI3_ECOLX
Protein HflK {ECO:0000313|EMBL:EQP43958.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
hflK; HflK protein
L2_019_070G1_scaffold_266_11
Escherichia albertii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9765..11045)
DNA (1281bp) protein (427aa)
GTPase HflX n=371 Tax=Escherichia RepID=E2QKA7_ECOLX
putative GTPase HflX
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=502347 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia albertii (strain TW07627).;"
L2_019_070G1_scaffold_266_12
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11121..11429)
DNA (309bp) protein (103aa)
RNA-binding protein Hfq n=1365 Tax=Enterobacteriaceae RepID=HFQ_ECO24
hfq; RNA chaperone protein
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=42897 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 2a.;"
L2_019_070G1_scaffold_266_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11515..12465)
DNA (951bp) protein (317aa)
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
tRNA dimethylallyltransferase n=142 Tax=Escherichia RepID=MIAA_ECO45
L2_019_070G1_scaffold_266_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12458..14305)
DNA (1848bp) protein (616aa)
DNA mismatch repair protein MutL n=128 Tax=Escherichia RepID=MUTL_ECO45
mutL; DNA mismatch repair protein MutL
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE182.;"
L2_019_070G1_scaffold_266_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14315..15652)
DNA (1338bp) protein (446aa)
N-acetylmuramoyl-L-alanine amidase AmiB n=102 Tax=Escherichia RepID=A1AJ75_ECOK1
amiB; N-acetylmuramoyl-l-alanine amidase II
N-acetylmuramoyl-L-alanine amidase AmiB {ECO:0000313|EMBL:EQX21957.1}; TaxID=1281200 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UMEA 3162-1).;"
L2_019_070G1_scaffold_266_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15671..16132)
DNA (462bp) protein (154aa)
ATPase with strong ADP affinity n=121 Tax=Escherichia RepID=B7MKX2_ECO45
yjeE; ATPase
Putative uncharacterized protein {ECO:0000313|EMBL:EFR16978.1}; TaxID=670897 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2362-75.;"
L2_019_070G1_scaffold_266_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16104..17636)
DNA (1533bp) protein (511aa)
Uncharacterized protein n=247 Tax=Escherichia RepID=G7RBA7_ECOC2
yjeF; hypothetical protein
YjeF family domain-containing protein {ECO:0000313|EMBL:EQP43951.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L2_019_070G1_scaffold_266_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17650..18789
DNA (1140bp) protein (380aa)
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
Epoxyqueuosine reductase n=2 Tax=Escherichia RepID=Q1R394_ECOUT
putative electron transport protein YjeS
L2_019_070G1_scaffold_266_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19314..19859)
DNA (546bp) protein (182aa)
Oligoribonuclease {ECO:0000256|HAMAP-Rule:MF_00045}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00045};; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
orn; oligoribonuclease (EC:3.1.-.-)
Oligoribonuclease n=6 Tax=Escherichia coli RepID=T6GQE0_ECOLX
L2_019_070G1_scaffold_266_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19954..21006
DNA (1053bp) protein (351aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1281200 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UMEA 3162-1).;"
Putative ribosome biogenesis GTPase RsgA n=429 Tax=Escherichia RepID=RSGA_ECO27
ribosome-associated GTPase
L2_019_070G1_scaffold_266_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21103..22071
DNA (969bp) protein (323aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00662, ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00662, ECO:0000256|SAAS:SAAS00093350};; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
psd; phosphatidylserine decarboxylase (EC:4.1.1.65)
Phosphatidylserine decarboxylase proenzyme n=6 Tax=Escherichia coli RepID=T6GRM8_ECOLX
L2_019_070G1_scaffold_266_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22093..24228
DNA (2136bp) protein (712aa)
Potassium efflux system protein KefA n=18 Tax=Escherichia coli RepID=L3AS36_ECOLX
Potassium efflux system protein KefA {ECO:0000313|EMBL:EQP43946.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
yjeP; hypothetical protein
Displaying 22 items

View Taxonomy