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L2_019_070G1_scaffold_353

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_070G1_scaffold_353_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..363)
DNA (363bp) protein (121aa)
Fimbrial-like adhesin protein n=1 Tax=Escherichia coli UMEA 3705-1 RepID=T9SRW6_ECOLX
fimbrial-like protein
Fimbrial protein YadN {ECO:0000313|EMBL:EOU96018.1}; TaxID=1169353 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE36.;"
L2_019_070G1_scaffold_353_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(774..1028)
DNA (255bp) protein (85aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:AJO82077.1}; EC=2.7.6.3 {ECO:0000313|EMBL:AJO82077.1};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
2-amino-4-hydroxy-6-hydroxymethyldihydropteridin n=200 Tax=Escherichia coli RepID=E2QF72_ECOLX
folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridin
L2_019_070G1_scaffold_353_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1025..2092)
DNA (1068bp) protein (356aa)
Poly(A) polymerase I {ECO:0000256|HAMAP-Rule:MF_00957}; Short=PAP I {ECO:0000256|HAMAP-Rule:MF_00957};; EC=2.7.7.19 {ECO:0000256|HAMAP-Rule:MF_00957};; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
poly(A) polymerase (EC:2.7.7.19)
Poly(A) polymerase I n=1 Tax=Escherichia coli HVH 77 (4-2605759) RepID=T6JI65_ECOLX
L2_019_070G1_scaffold_353_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2185..3111)
DNA (927bp) protein (309aa)
Glutamyl-Q tRNA(Asp) synthetase {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018238}; Short=Glu-Q-RSs {ECO:0000256|HAMAP-Rule:MF_01428};; EC=6.1.1.- {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018222};; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
Glutamyl-Q tRNA(Asp) synthetase n=201 Tax=Escherichia coli RepID=GLUQ_ECOL6
yadB; putative glutamyl t-RNA synthetase
L2_019_070G1_scaffold_353_5
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3148..3603)
DNA (456bp) protein (152aa)
RNA polymerase-binding transcription factor DksA n=1448 Tax=Enterobacteriaceae RepID=DKSA_ECO57
dksA; DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=766150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri K-315.;"
L2_019_070G1_scaffold_353_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3781..4485)
DNA (705bp) protein (235aa)
Sugar fermentation stimulation protein A n=304 Tax=Escherichia RepID=SFSA_ECO27
sugar fermentation stimulation protein A
Sugar fermentation stimulation protein A {ECO:0000256|HAMAP-Rule:MF_00095}; TaxID=868133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1A.;"
L2_019_070G1_scaffold_353_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4500..5030)
DNA (531bp) protein (177aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
ligT; 2'-5'-RNA ligase (EC:6.5.1.-)
2'-5'-RNA ligase n=6 Tax=Escherichia coli RepID=T6IF09_ECOLX
L2_019_070G1_scaffold_353_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5104..7533
DNA (2430bp) protein (810aa)
ATP-dependent RNA helicase hrpB n=5 Tax=Escherichia coli RepID=T6I3Y6_ECOLX
ATP-dependent RNA helicase hrpB {ECO:0000313|EMBL:EQP60572.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
ATP-dependent RNA helicase HrpB
L2_019_070G1_scaffold_353_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7627..10155
DNA (2529bp) protein (843aa)
mrcB; penicillin-binding protein 1b (EC:2.4.1.129)
Penicillin-binding protein 1b n=25 Tax=Escherichia coli RepID=E0R366_ECOLX
Penicillin-binding protein 1B {ECO:0000256|PIRNR:PIRNR002799}; Short=PBP-1b {ECO:0000256|PIRNR:PIRNR002799};; Short=PBP1b {ECO:0000256|PIRNR:PIRNR002799};; Murein polymerase {ECO:0000256|PIRNR:PIRNR002799}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L2_019_070G1_scaffold_353_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10375..12618
DNA (2244bp) protein (748aa)
Ferrichrome outer membrane transporter n=107 Tax=Escherichia RepID=A1A7J6_ECOK1
Ferrichrome-iron receptor {ECO:0000313|EMBL:EQX33978.1}; TaxID=1281200 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UMEA 3162-1).;"
fhuA; ferrichrome outer membrane transporter
L2_019_070G1_scaffold_353_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12669..13466
DNA (798bp) protein (266aa)
Ferrichrome ABC transporter, ATP-binding protein FhuC (Fragment) n=3 Tax=Escherichia coli RepID=D8BIF5_ECOLX
fhuC; Ferrichrome transport ATP-binding protein fhuC
FhuC {ECO:0000313|EMBL:EHU49347.1}; TaxID=868141 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2D.;"
L2_019_070G1_scaffold_353_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13466..14269
DNA (804bp) protein (268aa)
Ferrichrome-binding periplasmic protein n=287 Tax=Escherichia RepID=E2QF81_ECOLX
ferrichrome-iron ABC transporter substrate binding component
Ferric hydroxamate ABC transporter (TC 3.A.1.14.3), periplasmic substrate binding protein FhuD {ECO:0000313|EMBL:CDL46802.1}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
Displaying 12 items

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