ggKbase home page

L2_019_070G1_scaffold_613

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_070G1_scaffold_613_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..348
DNA (348bp) protein (116aa)
adk; adenylate kinase (EC:2.7.4.3)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Adenylate kinase n=10 Tax=Clostridium perfringens RepID=KAD_CLOP1
L2_019_070G1_scaffold_613_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

348..1097
DNA (750bp) protein (250aa)
map; methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Methionine aminopeptidase n=11 Tax=Clostridium perfringens RepID=MAP1_CLOPE
L2_019_070G1_scaffold_613_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1472..1690
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=11 Tax=Clostridium perfringens RepID=IF1_CLOP1
infA; translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000255|HAMAP-Rule:MF_00075}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_019_070G1_scaffold_613_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


2053..2418
DNA (366bp) protein (122aa)
30S ribosomal protein S13 n=11 Tax=Clostridium perfringens RepID=RS13_CLOP1
rpsM; 30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000255|HAMAP-Rule:MF_01315}; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 /; NCIMB 6125 / NCTC 8237 / Type A).;"
L2_019_070G1_scaffold_613_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


2435..2830
DNA (396bp) protein (132aa)
30S ribosomal protein S11 n=11 Tax=Clostridium perfringens RepID=RS11_CLOP1
rpsK; 30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_019_070G1_scaffold_613_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


2854..3474
DNA (621bp) protein (207aa)
30S ribosomal protein S4 A n=8 Tax=Clostridium perfringens RepID=RS4A_CLOP1
rpsD; 30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_019_070G1_scaffold_613_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3559..4506
DNA (948bp) protein (316aa)
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
DNA-directed RNA polymerase subunit alpha n=11 Tax=Clostridium perfringens RepID=RPOA_CLOP1
L2_019_070G1_scaffold_613_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


4523..4864
DNA (342bp) protein (114aa)
50S ribosomal protein L17 n=12 Tax=Clostridium perfringens RepID=RL17_CLOP1
rplQ; 50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_019_070G1_scaffold_613_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5287..5811
DNA (525bp) protein (175aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Energy-coupling factor transporter ATP-binding protein EcfA1 n=8 Tax=Clostridium perfringens RepID=ECFA1_CLOP1
cobalt transporter ATP-binding subunit
Displaying 9 items

View Taxonomy