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L2_019_070G1_scaffold_656

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_070G1_scaffold_656_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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360..2030
DNA (1671bp) protein (557aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
fhs; formate--tetrahydrofolate ligase Fhs (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=3 Tax=Clostridium butyricum RepID=B1R1S3_CLOBU
L2_019_070G1_scaffold_656_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2159..2878
DNA (720bp) protein (240aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Type III pantothenate kinase n=4 Tax=Clostridium butyricum RepID=B1R1S2_CLOBU
pantothenate kinase
L2_019_070G1_scaffold_656_3

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2871..3716
DNA (846bp) protein (282aa)
dus; tRNA-dihydrouridine synthase 1 (EC:1.-.-.-)
tRNA-dihydrouridine synthase n=3 Tax=Clostridium butyricum RepID=B1R1S1_CLOBU
tRNA-dihydrouridine synthase {ECO:0000313|EMBL:ETJ16513.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_019_070G1_scaffold_656_4
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4063..4548
DNA (486bp) protein (162aa)
Transcription elongation factor GreA n=4 Tax=Clostridium butyricum RepID=B1R1S0_CLOBU
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
greA1; transcription elongation factor GreA
L2_019_070G1_scaffold_656_5

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4563..6068
DNA (1506bp) protein (502aa)
lysS; lysine--tRNA ligase LysS (EC:6.1.1.6)
Lysine--tRNA ligase n=4 Tax=Clostridium butyricum RepID=B1R1R9_CLOBU
Lysine-tRNA ligase {ECO:0000313|EMBL:ETJ16511.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_019_070G1_scaffold_656_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6732..7058)
DNA (327bp) protein (109aa)
UPI0003D62945 related cluster n=1 Tax=unknown RepID=UPI0003D62945
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
single stranded DNA-binding protein
L2_019_070G1_scaffold_656_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7480..8871
DNA (1392bp) protein (464aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
glyQS; glycine--tRNA ligase (EC:6.1.1.14)
Glycine--tRNA ligase n=4 Tax=Clostridium butyricum RepID=B1R1R7_CLOBU
L2_019_070G1_scaffold_656_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9164..10540
DNA (1377bp) protein (459aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase MurD (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=2 Tax=Clostridium butyricum RepID=B1R1R6_CLOBU
L2_019_070G1_scaffold_656_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10639..11664)
DNA (1026bp) protein (342aa)
Putative serine/threonine protein kinase n=2 Tax=Clostridium butyricum RepID=B1R1R5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP52498.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
Displaying 9 items

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