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L2_019_119G1_scaffold_5

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Displaying items 1-30 of 179 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_119G1_scaffold_5_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(179..1195)
DNA (1017bp) protein (339aa)
Nitrogen assimilation regulatory protein n=2 Tax=Clostridium butyricum RepID=B1QWT0_CLOBU
Sigma-54 dependent transcriptional regulator {ECO:0000313|EMBL:EEP54330.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
sigma-54 dependent transcriptional regulator
L2_019_119G1_scaffold_5_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1691..2656
DNA (966bp) protein (322aa)
Integral membrane protein domain protein n=2 Tax=Clostridium butyricum RepID=B1QWS9_CLOBU
Integral membrane protein domain protein {ECO:0000313|EMBL:EEP54810.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
integral membrane protein
L2_019_119G1_scaffold_5_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2688..5255
DNA (2568bp) protein (856aa)
Cysteine-rich domain protein n=2 Tax=Clostridium butyricum RepID=B1QWS8_CLOBU
Cysteine-rich domain protein {ECO:0000313|EMBL:EEP54908.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
L2_019_119G1_scaffold_5_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5567..6301
DNA (735bp) protein (245aa)
Copper homeostasis protein CutC n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IH87_CLOBU
Copper homeostasis protein CutC {ECO:0000313|EMBL:KHD15082.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
Uncharacterized protein involved in copper resistance
L2_019_119G1_scaffold_5_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6415..7722)
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z785_CLOBU
Histidine kinase {ECO:0000313|EMBL:KHD15081.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
integral membrane sensor signal transduction histidine kinase
L2_019_119G1_scaffold_5_6
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7715..8404)
DNA (690bp) protein (230aa)
Regulatory protein VanR n=4 Tax=Clostridium butyricum RepID=B1QXZ9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ90059.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
Two component transcriptional regulator, winged helix family
L2_019_119G1_scaffold_5_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8607..9284
DNA (678bp) protein (226aa)
SNARE protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JI04_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ETI88471.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
SNARE -like protein
L2_019_119G1_scaffold_5_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9345..9845
DNA (501bp) protein (167aa)
UPI0003D5A9DD related cluster n=1 Tax=unknown RepID=UPI0003D5A9DD
CDP-diacylglycerol-serine O-phosphatidyltransferase {ECO:0000313|EMBL:ETI88470.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
CDP-diacylglycerol/serine O-phosphatidyltransferase
L2_019_119G1_scaffold_5_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10209..11528
DNA (1320bp) protein (440aa)
UPI0003D5C299 related cluster n=1 Tax=unknown RepID=UPI0003D5C299
ATP-binding protein {ECO:0000313|EMBL:KHD15077.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
ATP-binding protein
L2_019_119G1_scaffold_5_10
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11488..12267
DNA (780bp) protein (260aa)
UPI0003D5B2D0 related cluster n=1 Tax=unknown RepID=UPI0003D5B2D0
Uncharacterized protein {ECO:0000313|EMBL:KJZ92263.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
agrA; accessory regulator protein A
L2_019_119G1_scaffold_5_11
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12636..13874
DNA (1239bp) protein (413aa)
hypothetical protein n=1 Tax=Clostridium beijerinckii RepID=UPI00030165E2
Radical SAM domain protein {ECO:0000313|EMBL:AJG97002.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
radical SAM domain-containing protein
L2_019_119G1_scaffold_5_12
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13881..14897
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Clostridium beijerinckii RepID=UPI0002FA6198
Heme biosynthesis (NirJ-2) family protein {ECO:0000313|EMBL:AJG97003.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
radical SAM domain-containing protein
L2_019_119G1_scaffold_5_13
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14946..15116
DNA (171bp) protein (57aa)
hypothetical protein n=1 Tax=Clostridium beijerinckii RepID=UPI00031154D8
Uncharacterized protein {ECO:0000313|EMBL:AJG97004.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
L2_019_119G1_scaffold_5_14
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15175..15348
DNA (174bp) protein (58aa)
hypothetical protein n=1 Tax=Clostridium beijerinckii RepID=UPI0002E69AE4
Uncharacterized protein {ECO:0000313|EMBL:AJG97005.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
hypothetical protein
L2_019_119G1_scaffold_5_15
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15446..16453
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Clostridium beijerinckii RepID=UPI0002DF7C45
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:AJG97006.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
putative serine protease
L2_019_119G1_scaffold_5_16
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16437..18155
DNA (1719bp) protein (573aa)
lipid A export ATP-binding/permease MsbA (EC:3.6.3.-)
multidrug ABC transporter ATP-binding protein n=1 Tax=Clostridium beijerinckii RepID=UPI00030E8D28
ABC-type multidrug transport system, ATPase and permease component {ECO:0000313|EMBL:AJG97007.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
L2_019_119G1_scaffold_5_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18168..19046
DNA (879bp) protein (293aa)
UPI0003D61A2A related cluster n=1 Tax=unknown RepID=UPI0003D61A2A
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KHD15075.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
ABC transporter
L2_019_119G1_scaffold_5_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19048..20136
DNA (1089bp) protein (363aa)
UPI0003D653DD related cluster n=1 Tax=unknown RepID=UPI0003D653DD
Uncharacterized protein {ECO:0000313|EMBL:ETI88466.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
L2_019_119G1_scaffold_5_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20133..20831
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JH49_CLOBU
Membrane protein {ECO:0000313|EMBL:KHD15073.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
L2_019_119G1_scaffold_5_20
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21054..21689
DNA (636bp) protein (212aa)
putative AgrB-like protein (EC:3.4.-.-)
Putative AgrB-like protein {ECO:0000256|HAMAP-Rule:MF_00784}; EC=3.4.-.- {ECO:0000256|HAMAP-Rule:MF_00784};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Putative AgrB-like protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MXX8_CLOSA
L2_019_119G1_scaffold_5_21
unknown

Not on your lists

21661..21834
DNA (174bp) protein (58aa)

This feature has no annotations

L2_019_119G1_scaffold_5_22
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22022..22228)
DNA (207bp) protein (69aa)
Transcription regulator, Cro/CI family-related protein n=4 Tax=Clostridium butyricum RepID=B1QXZ5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ90060.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
DNA-binding protein
L2_019_119G1_scaffold_5_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22241..22729)
DNA (489bp) protein (163aa)
UPI0003D5F72D related cluster n=1 Tax=unknown RepID=UPI0003D5F72D
Uncharacterized protein {ECO:0000313|EMBL:ETI88463.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
L2_019_119G1_scaffold_5_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22775..22990)
DNA (216bp) protein (72aa)
Group-specific protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J856_CLOBU
Group-specific protein {ECO:0000313|EMBL:KHD15070.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
lipoprotein
L2_019_119G1_scaffold_5_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23308..23583
DNA (276bp) protein (92aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1QXZ2_CLOBU
UDP-galactopyranose mutase {ECO:0000313|EMBL:ETI88461.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
L2_019_119G1_scaffold_5_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23713..25587
DNA (1875bp) protein (625aa)
Cadmium-exporting ATPase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JH43_CLOBU
Cation transporter {ECO:0000313|EMBL:KHD15068.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
L2_019_119G1_scaffold_5_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26781..27254
DNA (474bp) protein (158aa)
UPI0003D5E1E9 related cluster n=1 Tax=unknown RepID=UPI0003D5E1E9
Uncharacterized protein {ECO:0000313|EMBL:KHD15067.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
L2_019_119G1_scaffold_5_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27304..28302
DNA (999bp) protein (333aa)
UPI0003D5F2FF related cluster n=1 Tax=unknown RepID=UPI0003D5F2FF
Oxidoreductase {ECO:0000313|EMBL:KHD15066.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
oxidoreductase
L2_019_119G1_scaffold_5_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28454..29812
DNA (1359bp) protein (453aa)
UPI0003D5978A related cluster n=1 Tax=unknown RepID=UPI0003D5978A
Citrate transporter {ECO:0000313|EMBL:KHD15065.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
citrate transporter
L2_019_119G1_scaffold_5_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30026..32155
DNA (2130bp) protein (710aa)
N-methylhydaintoinase A n=2 Tax=Clostridium butyricum RepID=B1QXY7_CLOBU
N-methylhydaintoinase A {ECO:0000313|EMBL:EEP55039.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hydantoinase/oxoprolinase
Displaying items 1-30 of 179 in total

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