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L2_019_119G1_scaffold_55

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_119G1_scaffold_55_1
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..151)
DNA (150bp) protein (50aa)
Integrase catalytic subunit n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BRY9_9CLOT
Integrase catalytic subunit {ECO:0000313|EMBL:EOR19828.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
integrase catalytic subunit
L2_019_119G1_scaffold_55_2
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(467..775)
DNA (309bp) protein (103aa)
Transposase IS200-family protein n=3 Tax=Clostridium cellulovorans RepID=D9SL34_CLOC7
transposase IS200-family protein
Transposase IS200-family protein {ECO:0000313|EMBL:ADL51730.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
L2_019_119G1_scaffold_55_3
unknown

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comp(2681..2857)
DNA (177bp) protein (59aa)

This feature has no annotations

L2_019_119G1_scaffold_55_4
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2959..6045)
DNA (3087bp) protein (1029aa)
Acriflavin resistance protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LWA4_CLOB8
acriflavin resistance protein
Acriflavin resistance protein {ECO:0000313|EMBL:ABR34634.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L2_019_119G1_scaffold_55_5
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6057..7331)
DNA (1275bp) protein (425aa)
RND family efflux transporter, MFP subunit n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TX85_9CLOT
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:EKQ52216.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
RND family efflux transporter MFP subunit
L2_019_119G1_scaffold_55_6
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7723..8892
DNA (1170bp) protein (390aa)
hypothetical protein n=1 Tax=Clostridium beijerinckii RepID=UPI0002DA236F
integral membrane sensor signal transduction histidine kinase
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:ABR35981.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L2_019_119G1_scaffold_55_7
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8916..9578
DNA (663bp) protein (221aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MQM2_9CLOT
two component transcriptional regulator, LuxR family
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:AGF58488.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_019_119G1_scaffold_55_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9964..11424)
DNA (1461bp) protein (487aa)
MDR-type permease n=2 Tax=Clostridium butyricum RepID=B1QUV3_CLOBU
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:EEP56055.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
MDR-type permease
L2_019_119G1_scaffold_55_9
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11424..11843)
DNA (420bp) protein (140aa)
MarR-family transcriptional regulator n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UWH7_CLOBO
MarR-family transcriptional regulator {ECO:0000313|EMBL:EES48858.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
MarR-family transcriptional regulator
L2_019_119G1_scaffold_55_10
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12303..12542
DNA (240bp) protein (80aa)
Acetyltransferase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G5A7_CLOPA
Acetyltransferase {ECO:0000313|EMBL:ETD70862.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
acetyltransferase
L2_019_119G1_scaffold_55_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12654..13433)
DNA (780bp) protein (260aa)
Metal-dependent phosphohydrolase, HD subdomain n=4 Tax=Clostridium butyricum RepID=B1QUP6_CLOBU
Metal-dependent phosphohydrolase, HD subdomain {ECO:0000313|EMBL:EEP55977.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L2_019_119G1_scaffold_55_12
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16147..16626)
DNA (480bp) protein (160aa)
Putative cell wall binding repeat-containing protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J9H8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ92281.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
cell wall binding repeat-containing protein
L2_019_119G1_scaffold_55_13
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16799..17599)
DNA (801bp) protein (267aa)
RelA/SpoT domain protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M284_9CLOT
RelA/SpoT domain protein {ECO:0000313|EMBL:EHI98866.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
RelA/SpoT domain protein
L2_019_119G1_scaffold_55_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17780..18646)
DNA (867bp) protein (289aa)
N-carbamoylputrescine amidase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JHK0_CLOBU
Carbon-nitrogen hydrolase {ECO:0000313|EMBL:KHD16673.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hydratase
L2_019_119G1_scaffold_55_15
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18738..20483)
DNA (1746bp) protein (582aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EF91_CLOPA
tlpC; methyl-accepting chemotaxis protein TlpC
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:EKQ57849.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
L2_019_119G1_scaffold_55_16
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(20508..21599)
DNA (1092bp) protein (364aa)
Putative agmatine deiminase {ECO:0000256|HAMAP-Rule:MF_01841}; EC=3.5.3.12 {ECO:0000256|HAMAP-Rule:MF_01841};; Agmatine iminohydrolase {ECO:0000256|HAMAP-Rule:MF_01841}; TaxID=1138888 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0015.;"
agmatine deiminase (EC:3.5.3.12)
Putative agmatine deiminase n=2 Tax=Enterococcus faecium RepID=L2IUH9_ENTFC
L2_019_119G1_scaffold_55_17
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21735..23090)
DNA (1356bp) protein (452aa)
Ornithine/acetylornithine aminotransferase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6UBY7_9CLOT
Ornithine/acetylornithine aminotransferase {ECO:0000313|EMBL:EKQ57879.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
putrescine--2-oxoglutarate aminotransferase
L2_019_119G1_scaffold_55_18
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23356..24177
DNA (822bp) protein (274aa)
Response regulator (CheY-like receiver and HTH DNA-binding domain containing protein) n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TD38_9CLOT
Response regulator (CheY-like receiver and HTH DNA-binding domain containing protein) {ECO:0000313|EMBL:EKQ57878.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
regulatory protein, LuxR
L2_019_119G1_scaffold_55_19
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24535..26016)
DNA (1482bp) protein (494aa)
gbsA; betaine aldehyde dehydrogenase GbsA (EC:1.2.1.8)
NAD-dependent aldehyde dehydrogenase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U764_9CLOT
NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:EKQ57876.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
L2_019_119G1_scaffold_55_20
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26068..27450)
DNA (1383bp) protein (461aa)
N-acyl-D-aspartate/D-glutamate deacylase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TY80_9CLOT
N-acyl-D-aspartate/D-glutamate deacylase {ECO:0000313|EMBL:EKQ57875.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
amidohydrolase 3
L2_019_119G1_scaffold_55_21
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27481..28287)
DNA (807bp) protein (269aa)
ABC-type spermidine/putrescine transport system, permease component II n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6UBY6_9CLOT
ornithine carbamoyltransferase
ABC-type spermidine/putrescine transport system, permease component II {ECO:0000313|EMBL:EKQ57874.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
L2_019_119G1_scaffold_55_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28288..29151)
DNA (864bp) protein (288aa)
Putrescine transport system permease protein PotH n=2 Tax=Clostridium butyricum RepID=B1QUC2_CLOBU
Spermidine/putrescine ABC transporter, permease protein PotB {ECO:0000313|EMBL:EEP53695.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
binding-protein-dependent transport systems inner membrane component
L2_019_119G1_scaffold_55_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29172..30290)
DNA (1119bp) protein (373aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Polyamine ABC transporter, ATP-binding protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AVK1_CLOBU
spermidine/putrescine ABC transporter ATPase
L2_019_119G1_scaffold_55_24
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30322..31482)
DNA (1161bp) protein (387aa)
Spermidine/putrescine-binding periplasmic protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U760_9CLOT
Spermidine/putrescine-binding periplasmic protein {ECO:0000313|EMBL:EKQ57871.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
extracellular solute-binding protein
L2_019_119G1_scaffold_55_25
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31797..32150)
DNA (354bp) protein (118aa)
Nitrogen regulatory protein P-II n=2 Tax=Clostridium RepID=A6M368_CLOB8
nitrogen regulatory protein P-II
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:ABR37048.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L2_019_119G1_scaffold_55_26
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32304..33065)
DNA (762bp) protein (254aa)
histidine kinase n=1 Tax=Clostridium beijerinckii RepID=UPI0002DF0744
response regulator receiver protein
Histidine kinase {ECO:0000313|EMBL:ETD68973.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
L2_019_119G1_scaffold_55_27
unknown

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comp(33251..33364)
DNA (114bp) protein (38aa)

This feature has no annotations

L2_019_119G1_scaffold_55_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33306..33863)
DNA (558bp) protein (186aa)
Acetyltransferase, GNAT family n=2 Tax=Clostridium butyricum RepID=C4IHZ2_CLOBU
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EEP54043.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
GNAT family acetyltransferase
L2_019_119G1_scaffold_55_29
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34069..35388)
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z7X7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83168.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
amino acid permease family protein
L2_019_119G1_scaffold_55_30
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35470..35724)
DNA (255bp) protein (85aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM68041.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
Displaying items 1-30 of 76 in total

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