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L2_019_119G1_scaffold_56

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Displaying items 1-30 of 127 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_119G1_scaffold_56_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..390)
DNA (390bp) protein (130aa)
Uncharacterized protein n=4 Tax=Escherichia coli RepID=T6HAN9_ECOLX
hypothetical protein
XmoH {ECO:0000313|EMBL:AHW84486.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L2_019_119G1_scaffold_56_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(431..1213)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Escherichia coli UMEA 3160-1 RepID=T8UQY2_ECOLX
hypothetical protein
ImpA family type VI secretion-associated protein {ECO:0000313|EMBL:CKH13534.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L2_019_119G1_scaffold_56_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1225..3870)
DNA (2646bp) protein (882aa)
ClpB protein {ECO:0000313|EMBL:ABE08646.1}; EC=3.4.21.92 {ECO:0000313|EMBL:ABE08646.1};; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
ATPases with chaperone activity, ATP-binding subunit n=83 Tax=Escherichia RepID=B7MLE1_ECO45
ClpA/ClpB family protein
L2_019_119G1_scaffold_56_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4062..4553)
DNA (492bp) protein (164aa)
Uncharacterized protein n=114 Tax=Escherichia RepID=B7MLE0_ECO45
hcpA_3; Secreted protein hcp
Secreted protein Hcp {ECO:0000313|EMBL:ABE08645.1}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
L2_019_119G1_scaffold_56_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4611..6263)
DNA (1653bp) protein (551aa)
Uncharacterized protein n=59 Tax=Escherichia coli RepID=B7MLD9_ECO45
yiaD_1; Inner membrane lipoprotein YiaD precursor
Uncharacterized protein {ECO:0000313|EMBL:ABE08643.1}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
L2_019_119G1_scaffold_56_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6276..6941)
DNA (666bp) protein (222aa)
Uncharacterized protein n=5 Tax=Escherichia coli RepID=T6H0K1_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EQP47067.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
hypothetical protein
L2_019_119G1_scaffold_56_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6938..8275)
DNA (1338bp) protein (446aa)
Uncharacterized protein n=133 Tax=Escherichia RepID=B7MLD7_ECO45
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAR04326.1}; TaxID=585035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O45:K1 (strain S88 / ExPEC).;"
L2_019_119G1_scaffold_56_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8293..9831)
DNA (1539bp) protein (513aa)
EvpB/family type VI secretion protein n=3 Tax=Escherichia coli RepID=T6HDY4_ECOLX
EvpB/family type VI secretion protein {ECO:0000313|EMBL:EQP47065.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
hypothetical protein
L2_019_119G1_scaffold_56_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9890..10390)
DNA (501bp) protein (167aa)
Type VI secretion protein n=6 Tax=Escherichia coli RepID=T6GZ73_ECOLX
Type VI secretion protein {ECO:0000313|EMBL:EQP47064.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
hypothetical protein
L2_019_119G1_scaffold_56_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11527..12624
DNA (1098bp) protein (366aa)
mltA; murein transglycosylase A (EC:3.2.1.-)
Membrane-bound lytic murein transglycosylase A n=1 Tax=Escherichia coli (strain UTI89 / UPEC) RepID=Q1R7M6_ECOUT
Membrane-bound lytic murein transglycosylase A {ECO:0000313|EMBL:CDN83418.1}; MltA protein; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
L2_019_119G1_scaffold_56_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12701..13507
DNA (807bp) protein (269aa)
Uncharacterized protein ygdL n=216 Tax=Escherichia RepID=E2QQQ8_ECOLX
ygdL; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAS10627.1}; TaxID=574521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O127:H6 (strain E2348/69 / EPEC).;"
L2_019_119G1_scaffold_56_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13558..14001)
DNA (444bp) protein (148aa)
Uncharacterized protein n=331 Tax=Escherichia RepID=D2NLW8_ECOS5
ygdK; Fe-S metabolism protein (sufE-like)
Uncharacterized protein {ECO:0000313|EMBL:BAI56142.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
L2_019_119G1_scaffold_56_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14001..15206)
DNA (1206bp) protein (402aa)
Cysteine desulfurase, catalytic subunit CsdA {ECO:0000313|EMBL:EHU52568.1}; EC=2.8.1.7 {ECO:0000313|EMBL:EHU52568.1};; TaxID=868142 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2E.;"
Cysteine desulfurase, catalytic subunit CsdA n=23 Tax=Escherichia coli RepID=E3XIC5_ECOLX
csdA; cysteine sulfinate desulfinase
L2_019_119G1_scaffold_56_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15398..15625
DNA (228bp) protein (76aa)
Uncharacterized protein n=116 Tax=Enterobacteriaceae RepID=D2NLW6_ECOS5
ygdI; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMX83064.1}; TaxID=1116119 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2719100.;"
L2_019_119G1_scaffold_56_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15976..16893
DNA (918bp) protein (306aa)
Glycine cleavage system transcriptional activator n=1321 Tax=Enterobacteriaceae RepID=GCVA_ECO57
gcvA; positive regulator of gcv operon
LysR family transcriptional regulator {ECO:0000313|EMBL:EFE61653.2}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
L2_019_119G1_scaffold_56_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16912..17307
DNA (396bp) protein (132aa)
UPF0382 inner membrane protein YgdD n=1299 Tax=Enterobacteriaceae RepID=YGDD_ECO57
ygdD; hypothetical protein
Conserved predicted inner membrane protein {ECO:0000313|EMBL:CAS10622.1}; TaxID=574521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O127:H6 (strain E2348/69 / EPEC).;"
L2_019_119G1_scaffold_56_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17300..18400
DNA (1101bp) protein (367aa)
Ribosomal RNA large subunit methyltransferase M {ECO:0000256|HAMAP-Rule:MF_01551, ECO:0000256|SAAS:SAAS00058276}; EC=2.1.1.186 {ECO:0000256|HAMAP-Rule:MF_01551, ECO:0000256|SAAS:SAAS00058274};; 23S rRNA (cytidine2498-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01551}; 23S rRNA 2'-O-ribose methyltransferase RlmM {ECO:0000256|HAMAP-Rule:MF_01551}; TaxID=868136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1D.;"
Ribosomal RNA large subunit methyltransferase M n=198 Tax=Escherichia coli RepID=RLMM_ECO27
ygdE; putative RNA 2'-O-ribose methyltransferase
L2_019_119G1_scaffold_56_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18444..19175)
DNA (732bp) protein (244aa)
DNA-binding transcriptional activator FucR n=5 Tax=Escherichia RepID=G7R6N4_ECOC2
fucR; DNA-binding transcriptional activator FucR
Bacterial regulatory s, gntR family protein {ECO:0000313|EMBL:EHU23754.1}; TaxID=868137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1E.;"
L2_019_119G1_scaffold_56_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19233..19655)
DNA (423bp) protein (141aa)
L-fucose mutarotase {ECO:0000256|HAMAP-Rule:MF_01662, ECO:0000256|SAAS:SAAS00010479}; EC=5.1.3.29 {ECO:0000256|HAMAP-Rule:MF_01662, ECO:0000256|SAAS:SAAS00148242};; Fucose 1-epimerase {ECO:0000256|HAMAP-Rule:MF_01662}; Type-2 mutarotase {ECO:0000256|HAMAP-Rule:MF_01662}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L-fucose mutarotase n=8 Tax=Escherichia coli RepID=E2QQQ0_ECOLX
L-fucose mutarotase
L2_019_119G1_scaffold_56_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19657..21075)
DNA (1419bp) protein (473aa)
L-fuculokinase {ECO:0000256|HAMAP-Rule:MF_00986}; EC=2.7.1.51 {ECO:0000256|HAMAP-Rule:MF_00986};; L-fuculose kinase {ECO:0000256|HAMAP-Rule:MF_00986}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L-fuculokinase n=15 Tax=Escherichia coli RepID=E2QQP9_ECOLX
L-fuculokinase
L2_019_119G1_scaffold_56_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21184..22959)
DNA (1776bp) protein (592aa)
L-fucose isomerase {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040911}; Short=FucIase {ECO:0000256|HAMAP-Rule:MF_01254};; EC=5.3.1.25 {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040955};; 6-deoxy-L-galactose isomerase {ECO:0000256|HAMAP-Rule:MF_01254}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
fucI; L-fucose isomerase (EC:5.3.1.25)
L-fucose isomerase n=7 Tax=Escherichia coli RepID=I4S1C9_ECOLX
L2_019_119G1_scaffold_56_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22992..24308)
DNA (1317bp) protein (439aa)
L-fucose-proton symporter n=283 Tax=Escherichia RepID=E2QQP7_ECOLX
fucP; L-fucose transporter
L-fucose transporter {ECO:0000313|EMBL:EMD09211.1}; TaxID=1196033 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli SEPT362.;"
L2_019_119G1_scaffold_56_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24855..25502
DNA (648bp) protein (216aa)
L-fuculose phosphate aldolase (EC:4.1.2.17)
L-fuculose phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00987}; EC=4.1.2.17 {ECO:0000256|HAMAP-Rule:MF_00987};; L-fuculose-1-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00987}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L-fuculose phosphate aldolase n=391 Tax=Escherichia RepID=FUCA_ECOL6
L2_019_119G1_scaffold_56_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25530..26678
DNA (1149bp) protein (383aa)
Lactaldehyde reductase n=167 Tax=Escherichia coli RepID=E2QQP5_ECOLX
fucO; L-1,2-propanediol oxidoreductase
Lactaldehyde reductase {ECO:0000313|EMBL:EQP47602.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L2_019_119G1_scaffold_56_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26783..27628)
DNA (846bp) protein (282aa)
Flap endonuclease Xni {ECO:0000256|HAMAP-Rule:MF_01192, ECO:0000256|SAAS:SAAS00008260}; Short=FEN {ECO:0000256|HAMAP-Rule:MF_01192};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01192, ECO:0000256|SAAS:SAAS00273675};; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
Flap endonuclease Xni n=36 Tax=Escherichia coli RepID=E2QQP4_ECOLX
xni; exonuclease IX
L2_019_119G1_scaffold_56_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27650..29017)
DNA (1368bp) protein (456aa)
L-serine ammonia-lyase {ECO:0000313|EMBL:EII24605.1}; EC=4.3.1.17 {ECO:0000313|EMBL:EII24605.1};; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
L-serine dehydratase 2 n=573 Tax=Enterobacteriaceae RepID=E2QQP3_ECOLX
sdaB; L-serine deaminase II
L2_019_119G1_scaffold_56_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29075..30364)
DNA (1290bp) protein (430aa)
Serine transporter n=398 Tax=Escherichia RepID=E2QQP2_ECOLX
sdaC; serine transporter
Serine transporter {ECO:0000313|EMBL:EFR18370.1}; TaxID=670897 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2362-75.;"
L2_019_119G1_scaffold_56_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30921..32285)
DNA (1365bp) protein (455aa)
LOG family protein YgdH n=1259 Tax=Enterobacteriaceae RepID=YGDH_ECO57
ygdH; rossmann fold nucleotide-binding protein
Putative nucleotide binding protein {ECO:0000313|EMBL:EGI44926.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;"
L2_019_119G1_scaffold_56_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32397..33245)
DNA (849bp) protein (283aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00817, ECO:0000256|SAAS:SAAS00037296}; EC=1.7.1.13 {ECO:0000256|HAMAP-Rule:MF_00817, ECO:0000256|SAAS:SAAS00001352};; 7-cyano-7-carbaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00817}; NADPH-dependent nitrile oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00817}; PreQ(0) reductase {ECO:0000256|HAMAP-Rule:MF_00817}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
NADPH-dependent 7-cyano-7-deazaguanine reductase n=290 Tax=Enterobacteriaceae RepID=QUEF_ECO24
queF; 7-cyano-7-deazaguanine reductase
L2_019_119G1_scaffold_56_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33313..33858
DNA (546bp) protein (182aa)
Protein Syd n=912 Tax=Enterobacteriaceae RepID=SYDP_ECO24
Syd family protein
Protein Syd {ECO:0000256|HAMAP-Rule:MF_01104, ECO:0000256|SAAS:SAAS00064630}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE73.;"
Displaying items 1-30 of 127 in total

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