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L2_019_119G1_scaffold_61

Search features with annotation key words

Displaying items 1-30 of 84 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_119G1_scaffold_61_1
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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597..1427
DNA (831bp) protein (277aa)
ABC transporter, permease protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TR17_CLOP1
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:CDM70138.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L2_019_119G1_scaffold_61_2
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1429..2211
DNA (783bp) protein (261aa)
ABC transporter, permease protein n=2 Tax=Clostridium perfringens RepID=Q0TR18_CLOP1
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:CDM70139.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L2_019_119G1_scaffold_61_3
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2240..3271
DNA (1032bp) protein (344aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TR19_CLOP1
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDM70140.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L2_019_119G1_scaffold_61_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3299..4345
DNA (1047bp) protein (349aa)
Probable spermidine/putrescine-binding protein 1 n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XKX3_CLOPE
spermidine/putrescine-binding protein 1
Probable spermidine/putrescine-binding protein 1 {ECO:0000313|EMBL:BAB80975.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_019_119G1_scaffold_61_5
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4632..5948
DNA (1317bp) protein (439aa)
Amidohydrolase domain protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1REK4_CLOPF
amidohydrolase domain protein
Amidohydrolase domain protein {ECO:0000313|EMBL:CDM70142.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L2_019_119G1_scaffold_61_6
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6013..7002
DNA (990bp) protein (330aa)
cbh; Choloylglycine hydrolase (EC:3.5.1.24)
Choloylglycine hydrolase {ECO:0000313|EMBL:CDM68924.1}; EC=3.5.1.24 {ECO:0000313|EMBL:CDM68924.1};; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
Choloylglycine hydrolase n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VSU6_CLOBI
L2_019_119G1_scaffold_61_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7154..7363)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H581_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEH99552.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L2_019_119G1_scaffold_61_8
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7387..7533)
DNA (147bp) protein (49aa)
Putative uncharacterized protein n=2 Tax=Clostridium botulinum E RepID=B2UZS6_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EES51295.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
L2_019_119G1_scaffold_61_9
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8102..9067
DNA (966bp) protein (322aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
tRNA-dihydrouridine synthase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FBL4_9CLOT
dihydrouridine synthase
L2_019_119G1_scaffold_61_10
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9251..10186
DNA (936bp) protein (312aa)
Putative Hydrolase, alpha/beta fold family n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FAR1_9CLOT
Putative Hydrolase, alpha/beta fold family {ECO:0000313|EMBL:CDG02138.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
alpha/beta fold family hydrolase
L2_019_119G1_scaffold_61_11
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10302..10889
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI00035C5FF5
TetR family transcriptional regulator {ECO:0000313|EMBL:KEZ88183.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
TetR family transcriptional regulator
L2_019_119G1_scaffold_61_12
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11090..13030
DNA (1941bp) protein (647aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGV0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99343.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
NADH:flavin oxidoreductase
L2_019_119G1_scaffold_61_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13432..14604
DNA (1173bp) protein (391aa)
UPI0003D65941 related cluster n=1 Tax=unknown RepID=UPI0003D65941
Ethanolamine utilization protein EutJ {ECO:0000313|EMBL:KHD16936.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
braC; leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein BraC
L2_019_119G1_scaffold_61_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14708..15592
DNA (885bp) protein (295aa)
High-affinity branched-chain amino acid ABC transporter, permease protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JBB4_CLOBU
High-affinity branched-chain amino acid transport system permease protein LivH {ECO:0000313|EMBL:KJZ86391.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
inner-membrane translocator
L2_019_119G1_scaffold_61_15
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15605..16636
DNA (1032bp) protein (344aa)
UPI0003D5D128 related cluster n=1 Tax=unknown RepID=UPI0003D5D128
Branched-chain amino acid transport system permease protein LivM {ECO:0000313|EMBL:KJZ93829.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
inner-membrane translocator
L2_019_119G1_scaffold_61_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16638..17414
DNA (777bp) protein (259aa)
High-affinity branched-chain amino acid transport ATP-binding proteinlivG n=4 Tax=Clostridium butyricum RepID=B1QU95_CLOBU
High-affinity branched-chain amino acid transport ATP-binding proteinlivG {ECO:0000313|EMBL:ETI87757.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
livG; high-affinity branched-chain amino acid transport ATP-binding protein LivG
L2_019_119G1_scaffold_61_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17407..18111
DNA (705bp) protein (235aa)
Abc transporter, hydrophobic amino acid uptake transporter family, ATP-binding protein n=3 Tax=Clostridium butyricum RepID=B1QU96_CLOBU
Abc transporter, hydrophobic amino acid uptake transporter (Haat) family, ATP-binding protein {ECO:0000313|EMBL:EEP53836.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
ABC transporter
L2_019_119G1_scaffold_61_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18104..18763
DNA (660bp) protein (220aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QU97_CLOBU
Cytidylate kinase {ECO:0000313|EMBL:KHD16940.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
L2_019_119G1_scaffold_61_19
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18859..19323)
DNA (465bp) protein (155aa)
Transcription elongation factor GreA n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MVT0_CLOSA
greA2; transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_019_119G1_scaffold_61_20
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19495..20271
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Clostridium beijerinckii RepID=UPI0002DA9C09
Glycerophosphoryl diester phosphodiesterase family protein {ECO:0000313|EMBL:AJG99315.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
glycerophosphoryl diester phosphodiesterase
L2_019_119G1_scaffold_61_21
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20587..22413
DNA (1827bp) protein (609aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H542_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99349.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
peptidase S8/S53 subtilisin kexin sedolisin
L2_019_119G1_scaffold_61_22
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22403..23551
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4G0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99350.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
subtilase family protease
L2_019_119G1_scaffold_61_23
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23563..24159
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4G0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99350.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
peptidase S8 and S53, subtilisin, kexin, sedolisin
L2_019_119G1_scaffold_61_24
unknown

Not on your lists

comp(24238..24411)
DNA (174bp) protein (58aa)

This feature has no annotations

L2_019_119G1_scaffold_61_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24533..25504)
DNA (972bp) protein (324aa)
Polysaccharide deacetylase family protein n=2 Tax=Clostridium perfringens RepID=H7CWZ0_CLOPF
endo-1,4-beta-xylanase
Polysaccharide deacetylase family protein {ECO:0000313|EMBL:EIA16891.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_019_119G1_scaffold_61_26
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25680..26342
DNA (663bp) protein (221aa)
Putative Two component transcriptional regulator,winged helix family n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EQA9_9CLOT
Putative Two component transcriptional regulator,winged helix family {ECO:0000313|EMBL:CDG01435.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
putative two component response regulator transcriptional regulatory protein
L2_019_119G1_scaffold_61_27
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26353..27765
DNA (1413bp) protein (471aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
signal transduction histidine kinase (EC:2.7.13.3)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FLD2_9CLOT
L2_019_119G1_scaffold_61_28
unknown

Not on your lists

27762..28343
DNA (582bp) protein (194aa)

This feature has no annotations

L2_019_119G1_scaffold_61_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28472..28822
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YWU0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32086.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
LrgA family protein
L2_019_119G1_scaffold_61_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28819..29523
DNA (705bp) protein (235aa)
LrgB family protein n=3 Tax=Clostridium butyricum RepID=B1QUL1_CLOBU
LrgB family protein {ECO:0000313|EMBL:EEP56559.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
LrgB family protein
Displaying items 1-30 of 84 in total

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