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L2_019_119G1_scaffold_67

Search features with annotation key words

Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_119G1_scaffold_67_1
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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625..1557
DNA (933bp) protein (311aa)
Tetratricopeptide TPR_1 repeat-containing protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M1Q4_9CLOT
Tetratricopeptide TPR_1 repeat-containing protein {ECO:0000313|EMBL:EHI98299.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
TPR repeat-containing protein
L2_019_119G1_scaffold_67_2
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1649..2149
DNA (501bp) protein (167aa)
flavin reductase n=1 Tax=Clostridium botulinum RepID=UPI0002F2F8BE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD21816.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L2_019_119G1_scaffold_67_3
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2509..3135)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LSC0_CLOB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR33250.1}; Flags: Precursor;; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L2_019_119G1_scaffold_67_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3389..3838
DNA (450bp) protein (150aa)
Transcriptional regulator, MarR family n=5 Tax=Clostridium butyricum RepID=B1QYD6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83109.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
transcriptional regulator, MarR family
L2_019_119G1_scaffold_67_5
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3860..4831
DNA (972bp) protein (324aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
fabH1; 3-oxoacyl-[acyl-carrier-protein] synthase 3 (EC:2.3.1.180)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TP69_9CLOT
L2_019_119G1_scaffold_67_6
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4925..5146
DNA (222bp) protein (74aa)
Acyl carrier protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U9L7_9CLOT
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
acpP1; acyl carrier protein AcpP
L2_019_119G1_scaffold_67_7
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5310..6251
DNA (942bp) protein (314aa)
nitronate monooxygenase (EC:1.13.12.16)
Enoyl-ACP reductase II n=4 Tax=Clostridium butyricum RepID=R0AT19_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ84516.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
L2_019_119G1_scaffold_67_8
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6244..7188
DNA (945bp) protein (315aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
fabD; malonyl CoA-acyl carrier protein transacylase FabD (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U1B6_9CLOT
L2_019_119G1_scaffold_67_9
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7260..8000
DNA (741bp) protein (247aa)
fabG2; 3-oxoacyl-[acyl-carrier-protein] reductase FabG (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase FabG {ECO:0000313|EMBL:AGX42315.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AGX42315.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
3-oxoacyl-[acyl-carrier-protein] reductase FabG n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MNY9_CLOSA
L2_019_119G1_scaffold_67_10
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8018..9250
DNA (1233bp) protein (411aa)
fabF1; 3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC:2.3.1.179)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MRM1_CLOSA
L2_019_119G1_scaffold_67_11
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9269..9769
DNA (501bp) protein (167aa)
Biotin carboxyl carrier protein of acetyl-CoA carboxylase AccB n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MS91_CLOSA
accB; biotin carboxyl carrier protein of acetyl-CoA carboxylase AccB
Biotin carboxyl carrier protein of acetyl-CoA carboxylase AccB {ECO:0000313|EMBL:AGX42317.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_019_119G1_scaffold_67_12
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9773..10201
DNA (429bp) protein (143aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; Beta-hydroxyacyl-ACP dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ (EC:4.2.1.59)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=4 Tax=Clostridium butyricum RepID=B1QYW7_CLOBU
L2_019_119G1_scaffold_67_13
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10211..11563
DNA (1353bp) protein (451aa)
accC1; biotin carboxylase AccC (EC:6.3.4.14 6.4.1.2)
Acetyl-CoA carboxylase, biotin carboxylase subunit n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U1B3_9CLOT
Acetyl-CoA carboxylase, biotin carboxylase subunit {ECO:0000313|EMBL:EKQ53772.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
L2_019_119G1_scaffold_67_14
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11517..12431
DNA (915bp) protein (305aa)
accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_01395};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MNZ3_CLOSA
L2_019_119G1_scaffold_67_15
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12424..13242
DNA (819bp) protein (273aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00057486};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
accA2; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Clostridium sp. DL-VIII RepID=G7M1R6_9CLOT
L2_019_119G1_scaffold_67_16
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13464..13877
DNA (414bp) protein (138aa)
HutP protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U9L5_9CLOT
HutP protein {ECO:0000313|EMBL:EKQ53769.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
HutP superfamily
L2_019_119G1_scaffold_67_17
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14129..15148
DNA (1020bp) protein (340aa)
ABC transporter substrate-binding protein n=1 Tax=Clostridium beijerinckii RepID=UPI0002DF0865
hypothetical protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETD71569.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
L2_019_119G1_scaffold_67_18
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15148..16065
DNA (918bp) protein (306aa)
ABC-type uncharacterized transport system, permease component n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LPZ3_9CLOT
ABC-type uncharacterized transport system, permease component
ABC-type uncharacterized transport system, permease component {ECO:0000313|EMBL:AGF54950.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_019_119G1_scaffold_67_19
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16031..16825
DNA (795bp) protein (265aa)
ABC-type uncharacterized transport system, ATPase component n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U094_9CLOT
ABC-type uncharacterized transport system, ATPase component {ECO:0000313|EMBL:EKQ53766.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
ABC transporter
L2_019_119G1_scaffold_67_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17002..18249
DNA (1248bp) protein (416aa)
AAA ATPase central domain protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J925_CLOBU
ATPase, AAA family {ECO:0000313|EMBL:KJZ83037.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
recombination factor protein RarA
L2_019_119G1_scaffold_67_21
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18425..18940
DNA (516bp) protein (172aa)
Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Clostridium sp. DL-VIII RepID=G7MCL4_9CLOT
Transcriptional regulator, BadM/Rrf2 family {ECO:0000313|EMBL:EHI98357.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
BadM/Rrf2 family transcriptional regulator
L2_019_119G1_scaffold_67_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18883..20064
DNA (1182bp) protein (394aa)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00038344}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00063383};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
iscS1; cysteine desulfurase IscS (EC:2.8.1.7)
Cysteine desulfurase n=4 Tax=Clostridium butyricum RepID=B1QYU3_CLOBU
L2_019_119G1_scaffold_67_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20066..20500
DNA (435bp) protein (145aa)
FeS cluster assembly scaffold protein NifU n=2 Tax=Clostridium butyricum RepID=M8K4P7_CLOBU
Nitrogen fixation protein NifU {ECO:0000313|EMBL:KHD15583.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
nifU; FeS cluster assembly scaffold protein NifU
L2_019_119G1_scaffold_67_24
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20534..21586
DNA (1053bp) protein (351aa)
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.8.1.-)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MSA1_CLOSA
L2_019_119G1_scaffold_67_25
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21717..22217
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MP73_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX42328.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_019_119G1_scaffold_67_26
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22345..23226
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MNE6_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX42329.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_019_119G1_scaffold_67_27
Thermoanaerobacter siderophilus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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23309..24214
DNA (906bp) protein (302aa)
Ribokinase n=1 Tax=Thermoanaerobacter siderophilus SR4 RepID=I9KR82_9THEO
Ribokinase {ECO:0000313|EMBL:EIV99393.1}; TaxID=880478 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter siderophilus SR4.;"
ribokinase
L2_019_119G1_scaffold_67_28
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


24572..27214
DNA (2643bp) protein (881aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
alaS; alanine--tRNA ligase AlaS (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MP05_CLOSA
L2_019_119G1_scaffold_67_29
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27353..27610
DNA (258bp) protein (86aa)
UPF0297 protein Cbei_1105 n=3 Tax=Clostridium RepID=Y1105_CLOB8
hypothetical protein
UPF0297 protein X276_02675 {ECO:0000256|HAMAP-Rule:MF_01507}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
L2_019_119G1_scaffold_67_30
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27656..28069
DNA (414bp) protein (138aa)
putative holliday junction resolvase (EC:3.1.-.-)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Putative Holliday junction resolvase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MF61_9CLOT
Displaying items 1-30 of 83 in total

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