ggKbase home page

L2_019_119G1_scaffold_72

Search features with annotation key words

Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_119G1_scaffold_72_1
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..232
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TVC8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ51411.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
L2_019_119G1_scaffold_72_2
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

244..1836
DNA (1593bp) protein (531aa)
Pectinesterase inhibitor domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QDV6_9CLOT
Pectinesterase inhibitor domain protein {ECO:0000313|EMBL:EKY25772.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L2_019_119G1_scaffold_72_3
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1855..2835
DNA (981bp) protein (327aa)
MoxR-like ATPase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U7R0_9CLOT
MoxR-like ATPase {ECO:0000313|EMBL:EKQ51409.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L2_019_119G1_scaffold_72_4
Firmicutes bacterium CAG:884, Firmicutes, Bacteria

Not on your lists

3229..3495
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:884 RepID=R5MQB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY93930.1}; TaxID=1262990 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:884.;"
hypothetical protein
L2_019_119G1_scaffold_72_5
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3549..4433
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6SYG4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ51408.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L2_019_119G1_scaffold_72_6
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4433..6229
DNA (1797bp) protein (599aa)
Aerotolerance regulator n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TWM5_9CLOT
Aerotolerance regulator {ECO:0000313|EMBL:EKQ51407.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
putative membrane protein
L2_019_119G1_scaffold_72_7
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6239..9010
DNA (2772bp) protein (924aa)
Putative membrane protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TVC4_9CLOT
Putative membrane protein {ECO:0000313|EMBL:EKQ51406.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L2_019_119G1_scaffold_72_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(9069..9272)
DNA (204bp) protein (68aa)
50S ribosomal protein L31 n=4 Tax=Clostridium butyricum RepID=B1R2H6_CLOBU
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
rpmE; ribosomal protein L31
L2_019_119G1_scaffold_72_9
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9679..10878
DNA (1200bp) protein (400aa)
Response regulator (CheY-like and AraC-type DNA-binding domain containing protein) n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TUU4_9CLOT
Response regulator (CheY-like and AraC-type DNA-binding domain containing protein) {ECO:0000313|EMBL:EKQ56420.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
response regulator
L2_019_119G1_scaffold_72_10
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10879..11814
DNA (936bp) protein (312aa)
Periplasmic binding protein and sugar binding domain of the LacI family protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PN50_9CLOT
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:EET89383.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
periplasmic binding protein/LacI transcriptional regulator
L2_019_119G1_scaffold_72_11
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11957..12967
DNA (1011bp) protein (337aa)
ABC transporter periplasmic-binding protein YtfQ n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MQP8_CLOSA
ytfQ; ABC transporter periplasmic-binding protein YtfQ
ABC transporter periplasmic-binding protein YtfQ {ECO:0000313|EMBL:AGX41762.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_019_119G1_scaffold_72_12
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13050..14567
DNA (1518bp) protein (506aa)
ABC transporter ATP-binding protein YtfR n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MMK6_CLOSA
ytfR; ABC transporter ATP-binding protein YtfR
ABC transporter ATP-binding protein YtfR {ECO:0000313|EMBL:AGX41763.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_019_119G1_scaffold_72_13
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14569..15636
DNA (1068bp) protein (356aa)
Inner membrane ABC transporter permease protein YtfT n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MLT0_CLOSA
ytfT; inner membrane ABC transporter permease protein YtfT
Inner membrane ABC transporter permease protein YtfT {ECO:0000313|EMBL:AGX41764.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_019_119G1_scaffold_72_14
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15603..16607
DNA (1005bp) protein (335aa)
Inner membrane ABC transporter permease protein YjfF n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MME5_CLOSA
yjfF; inner membrane ABC transporter permease protein YjfF
Inner membrane ABC transporter permease protein YjfF {ECO:0000313|EMBL:AGX41765.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_019_119G1_scaffold_72_15
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17042..17461
DNA (420bp) protein (140aa)
Methyl-accepting chemotaxis protein McpC n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MZV7_CLOSA
mcpC4; methyl-accepting chemotaxis protein McpC
Methyl-accepting chemotaxis protein McpC {ECO:0000313|EMBL:AGX45211.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_019_119G1_scaffold_72_16
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17608..19371
DNA (1764bp) protein (588aa)
Histidine kinase internal region n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6M1T7_CLOB8
Histidine kinase internal region {ECO:0000313|EMBL:AJH01522.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
histidine kinase internal region
L2_019_119G1_scaffold_72_17
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19456..20040
DNA (585bp) protein (195aa)
tdk; thymidine kinase Tdk (EC:2.7.1.21)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Thymidine kinase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MQ25_CLOSA
L2_019_119G1_scaffold_72_18
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20066..21847
DNA (1782bp) protein (594aa)
Release factor glutamine methyltransferase PrmC n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MLX6_CLOSA
prmC; release factor glutamine methyltransferase PrmC
Release factor glutamine methyltransferase PrmC {ECO:0000313|EMBL:AGX41523.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_019_119G1_scaffold_72_19
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21906..22988
DNA (1083bp) protein (361aa)
Peptide chain release factor 1 n=1 Tax=Clostridium sp. DL-VIII RepID=G7MBB7_9CLOT
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
prfA; peptide chain release factor 1
L2_019_119G1_scaffold_72_20
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23095..23682
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Clostridium beijerinckii RepID=UPI00030A0F4D
Uncharacterized protein {ECO:0000313|EMBL:ETD69102.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
hypothetical protein
L2_019_119G1_scaffold_72_21
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23703..24752
DNA (1050bp) protein (350aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
tRNA threonylcarbamoyladenosine biosynthesis protein YwlC n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MPC7_CLOSA
ywlC; tRNA threonylcarbamoyladenosine biosynthesis protein YwlC
L2_019_119G1_scaffold_72_22
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24856..25305
DNA (450bp) protein (150aa)
ywlF1; putative sugar phosphate isomerase YwlF (EC:5.3.1.-)
Putative sugar phosphate isomerase YwlF {ECO:0000313|EMBL:AGX41527.1}; EC=5.3.1.- {ECO:0000313|EMBL:AGX41527.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Putative sugar phosphate isomerase YwlF n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MQ29_CLOSA
L2_019_119G1_scaffold_72_23
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25353..25982
DNA (630bp) protein (210aa)
upp; uracil phosphoribosyltransferase Upp (EC:2.4.2.9)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
Uracil phosphoribosyltransferase n=4 Tax=Clostridium butyricum RepID=B1R2I3_CLOBU
L2_019_119G1_scaffold_72_24
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26003..26497
DNA (495bp) protein (165aa)
CMP/dCMP deaminase, zinc-binding protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5ML60_CLOSA
CMP/dCMP deaminase, zinc-binding protein
CMP/dCMP deaminase, zinc-binding protein {ECO:0000313|EMBL:AGX41529.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_019_119G1_scaffold_72_25
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26651..27802
DNA (1152bp) protein (384aa)
putative UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
Putative UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:AGX41530.1}; EC=5.1.3.14 {ECO:0000313|EMBL:AGX41530.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Putative UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MLR4_CLOSA
L2_019_119G1_scaffold_72_26
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28178..29356
DNA (1179bp) protein (393aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:ETD69108.1}; EC=2.3.1.9 {ECO:0000313|EMBL:ETD69108.1};; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
Acetyl-CoA acetyltransferase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FZJ0_CLOPA
acetyl-CoA acetyltransferase
L2_019_119G1_scaffold_72_27

Not on your lists

30030..30692
DNA (663bp) protein (221aa)
atpB; F0F1 ATP synthase subunit A (EC:3.6.3.14)
ATP synthase subunit a n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UZJ4_CLOBA
ATP synthase subunit a {ECO:0000313|EMBL:ETJ16464.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_019_119G1_scaffold_72_28

Not on your lists

30731..30946
DNA (216bp) protein (72aa)
atpE; F0F1 ATP synthase subunit C (EC:3.6.3.14)
ATP synthase subunit c n=4 Tax=Clostridium botulinum RepID=ATPL_CLOBA
ATP synthase subunit c {ECO:0000313|EMBL:ETJ16465.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_019_119G1_scaffold_72_29

Not on your lists

31006..31500
DNA (495bp) protein (165aa)
ATP synthase subunit b n=4 Tax=Clostridium butyricum RepID=B1R2J0_CLOBU
ATP synthase subunit b {ECO:0000313|EMBL:ETJ16466.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
atpF1; ATP synthase subunit b
L2_019_119G1_scaffold_72_30

Not on your lists

31503..32042
DNA (540bp) protein (180aa)
atpH; F0F1 ATP synthase subunit delta (EC:3.6.3.14)
ATP synthase subunit delta n=3 Tax=Clostridium butyricum RepID=B1R2J1_CLOBU
ATP synthase F1, delta subunit {ECO:0000313|EMBL:ETJ16467.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Displaying items 1-30 of 68 in total

View Taxonomy