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L2_019_119G1_scaffold_102

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_119G1_scaffold_102_1
unknown

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2..70
DNA (69bp) protein (23aa)

This feature has no annotations

L2_019_119G1_scaffold_102_2
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(95..724)
DNA (630bp) protein (210aa)
ykcB; putative mannosyltransferase YkcB (EC:2.4.1.-)
Putative mannosyltransferase YkcB {ECO:0000313|EMBL:AGX41169.1}; EC=2.4.1.- {ECO:0000313|EMBL:AGX41169.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Putative mannosyltransferase YkcB n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MK27_CLOSA
L2_019_119G1_scaffold_102_3
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1382..2605
DNA (1224bp) protein (408aa)
Nuclease SbcCD, D subunit n=1 Tax=Clostridium sp. DL-VIII RepID=G7LZP1_9CLOT
Nuclease SbcCD, D subunit {ECO:0000313|EMBL:EHI98210.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
nuclease SbcCD subunit D
L2_019_119G1_scaffold_102_4
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2592..6077
DNA (3486bp) protein (1162aa)
Chromosome segregation protein SMC n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FX44_CLOPA
Chromosome segregation protein SMC {ECO:0000313|EMBL:ETD68441.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
SMC domain-containing protein
L2_019_119G1_scaffold_102_5
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6220..6801
DNA (582bp) protein (194aa)
50S ribosomal protein L25 n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MRD0_CLOSA
rplY2; 50S ribosomal protein L25
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_019_119G1_scaffold_102_6
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7040..8764
DNA (1725bp) protein (575aa)
pgcA; phosphoglucomutase PgcA (EC:5.4.2.2)
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I n=1 Tax=Clostridium sp. DL-VIII RepID=G7LZQ0_9CLOT
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I {ECO:0000313|EMBL:EHI98219.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
L2_019_119G1_scaffold_102_7
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9248..10345
DNA (1098bp) protein (366aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MNY2_CLOSA
tetratricopeptide TPR_2 repeat protein
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:AGX42233.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_019_119G1_scaffold_102_8
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10713..11435
DNA (723bp) protein (241aa)
tagA; putative N-acetylmannosaminyltransferase TagA (EC:2.4.1.187)
Putative N-acetylmannosaminyltransferase TagA {ECO:0000313|EMBL:AGX42234.1}; EC=2.4.1.187 {ECO:0000313|EMBL:AGX42234.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Putative N-acetylmannosaminyltransferase TagA n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MN51_CLOSA
L2_019_119G1_scaffold_102_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11581..13152
DNA (1572bp) protein (524aa)
Integral membrane protein MviN n=4 Tax=Clostridium butyricum RepID=B1QTT4_CLOBU
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
integral membrane protein MviN
L2_019_119G1_scaffold_102_10
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13174..14463
DNA (1290bp) protein (430aa)
Glycosyl transferases group 1 n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MEQ2_9CLOT
glycosyl transferases group 1
Glycosyl transferases group 1 {ECO:0000313|EMBL:AGF54848.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_019_119G1_scaffold_102_11
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14464..15651
DNA (1188bp) protein (396aa)
Glycosyl transferase group 1 n=1 Tax=Clostridium sp. DL-VIII RepID=G7LZQ5_9CLOT
Glycosyl transferase group 1 {ECO:0000313|EMBL:EHI98224.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
glycosyl transferase, group 1
L2_019_119G1_scaffold_102_12
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15593..16840
DNA (1248bp) protein (416aa)
O-antigen polymerase n=1 Tax=Clostridium sp. DL-VIII RepID=G7LZQ6_9CLOT
O-antigen polymerase {ECO:0000313|EMBL:EHI98225.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
O-antigen polymerase
L2_019_119G1_scaffold_102_13
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16856..17503
DNA (648bp) protein (216aa)
Formiminotransferase-cyclodeaminase n=1 Tax=Clostridium sp. DL-VIII RepID=G7LZQ7_9CLOT
Formiminotransferase-cyclodeaminase {ECO:0000313|EMBL:EHI98226.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
formiminotransferase-cyclodeaminase
L2_019_119G1_scaffold_102_14
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17555..17692)
DNA (138bp) protein (46aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A6LS45_CLOB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR33175.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L2_019_119G1_scaffold_102_15
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17857..18351
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MEQ7_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF54853.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_019_119G1_scaffold_102_16
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18465..19331)
DNA (867bp) protein (289aa)
30.6 kDa protein in fumA 3'region (EC:3.5.1.-)
30.6 kDa protein in fumA 3'region {ECO:0000313|EMBL:AGX42241.1}; EC=3.5.1.- {ECO:0000313|EMBL:AGX42241.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
30.6 kDa protein in fumA 3'region n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MRE2_CLOSA
L2_019_119G1_scaffold_102_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19718..20815
DNA (1098bp) protein (366aa)
Ribosome-binding ATPase YchF n=2 Tax=Clostridium butyricum RepID=M8JIQ7_CLOBU
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ychF; GTP-dependent nucleic acid-binding protein EngD
L2_019_119G1_scaffold_102_18
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21088..22815
DNA (1728bp) protein (576aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MNZ1_CLOSA
tetratricopeptide TPR_2 repeat protein
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:AGX42243.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_019_119G1_scaffold_102_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23109..24215
DNA (1107bp) protein (369aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QTS5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KHD13317.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
L2_019_119G1_scaffold_102_20
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24261..25121
DNA (861bp) protein (287aa)
uppP; undecaprenyl-diphosphatase UppP (EC:3.6.1.27)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Undecaprenyl-diphosphatase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MA90_9CLOT
L2_019_119G1_scaffold_102_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25481..26578
DNA (1098bp) protein (366aa)
pfkA2; 6-phosphofructokinase 2 (EC:2.7.1.11)
6-phosphofructokinase n=4 Tax=Clostridium butyricum RepID=B1QTS3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83138.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L2_019_119G1_scaffold_102_22
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26632..27408
DNA (777bp) protein (259aa)
Beta-lactamase, putative n=2 Tax=Clostridium RepID=A6LS53_CLOB8
beta-lactamase, putative
Beta-lactamase {ECO:0000313|EMBL:ETD71650.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
L2_019_119G1_scaffold_102_23
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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27891..28817
DNA (927bp) protein (309aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
pyrB; aspartate carbamoyltransferase PyrB (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JH98_CLOBU
L2_019_119G1_scaffold_102_24
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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28818..29249
DNA (432bp) protein (144aa)
Aspartate carbamoyltransferase regulatory subunit n=1 Tax=Clostridium sp. DL-VIII RepID=G7LZR8_9CLOT
Aspartate carbamoyltransferase regulatory subunit {ECO:0000313|EMBL:EHI98237.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
pyrI; aspartate carbamoyltransferase regulatory chain
L2_019_119G1_scaffold_102_25
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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29276..30472
DNA (1197bp) protein (399aa)
pyrC; dihydroorotase PyrC (EC:3.5.2.3)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Dihydroorotase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MNS9_CLOSA
L2_019_119G1_scaffold_102_26
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30659..31522
DNA (864bp) protein (288aa)
pyrF; orotidine 5'-phosphate decarboxylase PyrF (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032256}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032220};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Orotidine 5'-phosphate decarboxylase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MRF1_CLOSA
L2_019_119G1_scaffold_102_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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31667..32410
DNA (744bp) protein (248aa)
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=2 Tax=Clostridium butyricum RepID=B1QTR7_CLOBU
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
pyrK; dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit
L2_019_119G1_scaffold_102_28
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32592..33488
DNA (897bp) protein (299aa)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Dihydroorotate dehydrogenase n=4 Tax=Clostridium butyricum RepID=B1QTR6_CLOBU
dihydroorotate dehydrogenase 1B
L2_019_119G1_scaffold_102_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33612..34286
DNA (675bp) protein (225aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
pyrE; orotate phosphoribosyltransferase PyrE (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=4 Tax=Clostridium butyricum RepID=B1QTR5_CLOBU
L2_019_119G1_scaffold_102_30
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34391..35764)
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MNT4_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX42255.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Displaying items 1-30 of 54 in total

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