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L2_019_119G1_scaffold_123

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_119G1_scaffold_123_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..1419)
DNA (1419bp) protein (473aa)
Uncharacterized protein (Fragment) n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z2G9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ34106.1}; Flags: Fragment;; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_019_119G1_scaffold_123_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1561..2037
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0APT7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ34107.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L2_019_119G1_scaffold_123_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2217..2933)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ACK5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ34108.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
BRO domain protein
L2_019_119G1_scaffold_123_4

Not on your lists

comp(2963..3202)
DNA (240bp) protein (80aa)
AbrB family transcriptional regulator n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AMV8_CLOBU
Transcriptional regulator, AbrB family {ECO:0000313|EMBL:ETJ21933.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
AbrB family transcriptional regulator
L2_019_119G1_scaffold_123_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3253..3948)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z375_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ34110.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
DNA replication protein
L2_019_119G1_scaffold_123_6

Not on your lists

comp(3929..5077)
DNA (1149bp) protein (383aa)
DnaD domain-containing protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z2H3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ETJ21935.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
phage replisome organizer, putative, N-terminal region
L2_019_119G1_scaffold_123_7
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5064..5192)
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U5G8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ56207.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
L2_019_119G1_scaffold_123_8
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5209..5460)
DNA (252bp) protein (84aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A6LVP8_CLOB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR34428.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L2_019_119G1_scaffold_123_9
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5528..5737)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FWZ0_CLOPA
Uncharacterized protein {ECO:0000313|EMBL:AJG99895.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
hypothetical protein
L2_019_119G1_scaffold_123_10
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6061..6402
DNA (342bp) protein (114aa)
Helix-turn-helix domain protein n=2 Tax=Clostridium RepID=A6LVK1_CLOB8
helix-turn-helix domain-containing protein
Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:AJG99896.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
L2_019_119G1_scaffold_123_11
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6519..10274)
DNA (3756bp) protein (1252aa)
Uncharacterized protein n=4 Tax=Pelosinus fermentans RepID=I9L638_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EIW15711.1}; TaxID=1149862 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans B4.;"
hypothetical protein
L2_019_119G1_scaffold_123_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10566..11279)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AG18_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31077.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L2_019_119G1_scaffold_123_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11858..12130)
DNA (273bp) protein (91aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QZH1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP54299.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L2_019_119G1_scaffold_123_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12189..12710)
DNA (522bp) protein (174aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
Signal peptidase I n=4 Tax=Clostridium butyricum RepID=B1QZH3_CLOBU
signal peptidase I
L2_019_119G1_scaffold_123_15
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12729..13175)
DNA (447bp) protein (149aa)
Putative membrane protein n=2 Tax=Clostridium butyricum RepID=B1QZH4_CLOBU
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase {ECO:0000313|EMBL:KJZ90178.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
membrane protein
L2_019_119G1_scaffold_123_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13172..13375)
DNA (204bp) protein (68aa)
HTH DNA-binding protein n=2 Tax=Clostridium butyricum RepID=B1QZH5_CLOBU
Conserved domain protein {ECO:0000313|EMBL:EEP54507.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
Predicted transcriptional regulators
L2_019_119G1_scaffold_123_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13702..14229
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AB04_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ETI89460.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
L2_019_119G1_scaffold_123_18
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14405..14545
DNA (141bp) protein (47aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JLM6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ90170.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
hypothetical protein
L2_019_119G1_scaffold_123_19
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14653..15048)
DNA (396bp) protein (132aa)
4-carboxymuconolactone decarboxylase {ECO:0000313|EMBL:KJZ90174.1}; EC=4.1.1.44 {ECO:0000313|EMBL:KJZ90174.1};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
Conserved protein n=4 Tax=Clostridium butyricum RepID=B1QZH8_CLOBU
hypothetical protein
L2_019_119G1_scaffold_123_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15530..16267
DNA (738bp) protein (246aa)
Surface surface protein n=2 Tax=Clostridium butyricum RepID=B1QZH9_CLOBU
Cell surface protein {ECO:0000313|EMBL:KHD13413.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
cell wall binding repeat-containing protein
L2_019_119G1_scaffold_123_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16330..17127)
DNA (798bp) protein (266aa)
Taurine import ATP-binding protein TauB 2 {ECO:0000313|EMBL:EEP54261.1}; EC=3.6.3.36 {ECO:0000313|EMBL:EEP54261.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
Nitrate transport ATP-binding protein NrtD n=2 Tax=Clostridium butyricum RepID=B1QZI0_CLOBU
tauB; taurine transport ATP-binding protein tauB
L2_019_119G1_scaffold_123_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17200..18234)
DNA (1035bp) protein (345aa)
Taurine-binding periplasmic protein n=2 Tax=Clostridium butyricum RepID=B1QZI1_CLOBU
Taurine ABC transporter substrate-binding protein {ECO:0000313|EMBL:KHD15994.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
taurine-binding periplasmic protein precursor
L2_019_119G1_scaffold_123_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18268..19053)
DNA (786bp) protein (262aa)
Taurine transport system permease protein TauC n=2 Tax=Clostridium butyricum RepID=B1QZI2_CLOBU
Taurine transport system permease protein TauC {ECO:0000313|EMBL:EEP53388.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
tauC; taurine transport system permease protein tauC
L2_019_119G1_scaffold_123_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19409..20578)
DNA (1170bp) protein (390aa)
Transcriptional regulator, PucR family n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K860_CLOBU
Purine catabolism regulatory protein family {ECO:0000313|EMBL:KHD15992.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
PucR family transcriptional regulator
L2_019_119G1_scaffold_123_25
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20697..21035)
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II n=2 Tax=Clostridium butyricum RepID=B1QZI4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ91985.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
nifI5; nitrogen regulatory protein PII
L2_019_119G1_scaffold_123_26
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21048..21374)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ANB6_CLOBU
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:KJZ90196.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
nitrogen regulatory protein P-II
L2_019_119G1_scaffold_123_27
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21511..23310)
DNA (1800bp) protein (600aa)
UPI0003D5DFF8 related cluster n=1 Tax=unknown RepID=UPI0003D5DFF8
Uncharacterized protein {ECO:0000313|EMBL:KJZ89024.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
diguanylate cyclase/phosphodiesterase
L2_019_119G1_scaffold_123_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23481..24092)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ALF3_CLOBU
Galactoside O-acetyltransferase {ECO:0000313|EMBL:KHD15988.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
maltose O-acetyltransferase
L2_019_119G1_scaffold_123_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24261..25964)
DNA (1704bp) protein (568aa)
oligo-1,6-glucosidase (EC:3.2.1.10)
UPI0003D64795 related cluster n=1 Tax=unknown RepID=UPI0003D64795
Oligo-1,6-glucosidase {ECO:0000313|EMBL:ETI89471.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
L2_019_119G1_scaffold_123_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26057..26218)
DNA (162bp) protein (54aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QZI9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33601.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Displaying items 1-30 of 63 in total

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