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L2_019_119G1_scaffold_142

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_119G1_scaffold_142_1
Clostridium kluyveri, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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256..1233
DNA (978bp) protein (326aa)
Uncharacterized protein n=2 Tax=Clostridium kluyveri RepID=B9DX08_CLOK1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDK35612.1}; TaxID=431943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680).;"
L2_019_119G1_scaffold_142_2
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1401..1886
DNA (486bp) protein (162aa)
Transposase (Fragment) n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TCU1_9CLOT
Transposase {ECO:0000313|EMBL:EKQ57748.1}; Flags: Fragment;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
transposase
L2_019_119G1_scaffold_142_3
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2097..3884)
DNA (1788bp) protein (596aa)
Histidine kinase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MLX4_9CLOT
histidine kinase
Histidine kinase {ECO:0000313|EMBL:AGF58939.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_019_119G1_scaffold_142_4
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3874..4617)
DNA (744bp) protein (248aa)
Response regulator n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1M045_9CLOT
response regulator
Response regulator {ECO:0000313|EMBL:AGF58940.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_019_119G1_scaffold_142_5
unknown

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comp(4829..5062)
DNA (234bp) protein (78aa)

This feature has no annotations

L2_019_119G1_scaffold_142_6
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5197..5772)
DNA (576bp) protein (192aa)
Putative manganese efflux pump MntP n=1 Tax=Clostridium sp. CAG:221 RepID=R6FZ70_9CLOT
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_019_119G1_scaffold_142_7
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6165..6653
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EN78_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDG00735.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hypothetical protein
L2_019_119G1_scaffold_142_8
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6901..8997)
DNA (2097bp) protein (699aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JNS9_CELLD
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ADZ82427.1}; Flags: Precursor;; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L2_019_119G1_scaffold_142_9
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9071..10876)
DNA (1806bp) protein (602aa)
L-fucose isomerase {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040911}; Short=FucIase {ECO:0000256|HAMAP-Rule:MF_01254};; EC=5.3.1.25 {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040955};; 6-deoxy-L-galactose isomerase {ECO:0000256|HAMAP-Rule:MF_01254}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L-fucose isomerase (EC:5.3.1.25)
L-fucose isomerase n=1 Tax=Clostridium sp. CAG:217 RepID=R6IQC7_9CLOT
L2_019_119G1_scaffold_142_10
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(11046..12509)
DNA (1464bp) protein (488aa)
Sugar (pentulose and hexulose) kinases (EC:2.7.1.5 2.7.1.51)
Sugar (Pentulose and hexulose) kinases n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R1K2_9FIRM
Sugar (Pentulose and hexulose) kinases {ECO:0000313|EMBL:CCZ35045.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
L2_019_119G1_scaffold_142_11
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

Not on your lists

comp(12622..13383)
DNA (762bp) protein (254aa)
Transcriptional regulator DeoR family n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BJ54_9FIRM
Transcriptional regulator DeoR family {ECO:0000313|EMBL:CDD65815.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
DeoR family transcriptional regulator
L2_019_119G1_scaffold_142_12
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

Not on your lists

comp(13402..13950)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BJ31_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD65816.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
Carbon dioxide concentrating mechanism/carboxysome shell protein
L2_019_119G1_scaffold_142_13
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

Not on your lists

comp(14038..15378)
DNA (1341bp) protein (447aa)
Respiratory-chain NADH dehydrogenase domain 51 kDa subunit n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BJY3_9FIRM
Respiratory-chain NADH dehydrogenase domain 51 kDa subunit {ECO:0000313|EMBL:CDD65817.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
Predicted NADH:ubiquinone oxidoreductase, subunit RnfC
L2_019_119G1_scaffold_142_14
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

Not on your lists

comp(15386..15649)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BL39_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD65818.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
Carbon dioxide concentrating mechanism/carboxysome shell protein
L2_019_119G1_scaffold_142_15
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15662..16309)
DNA (648bp) protein (216aa)
Phosphate propanoyltransferase {ECO:0000256|PIRNR:PIRNR010130}; EC=2.3.1.222 {ECO:0000256|PIRNR:PIRNR010130};; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Phosphate propanoyltransferase n=1 Tax=Clostridium sp. D5 RepID=F0Z0E3_9CLOT
propanediol utilization protein
L2_019_119G1_scaffold_142_16
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16335..16748)
DNA (414bp) protein (138aa)
Propanediol utilization protein PduA n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9JET3_9FIRM
Propanediol utilization protein PduA {ECO:0000313|EMBL:EOS32628.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
Carbon dioxide concentrating mechanism/carboxysome shell protein
L2_019_119G1_scaffold_142_17
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16771..17049)
DNA (279bp) protein (93aa)
Microcompartments protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KN60_CLOPH
microcompartments protein
Microcompartments protein {ECO:0000313|EMBL:ABX41559.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L2_019_119G1_scaffold_142_18
Thermoanaerobacterium saccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(17080..17358)
DNA (279bp) protein (93aa)
Microcompartments protein n=1 Tax=Thermoanaerobacterium xylanolyticum (strain ATCC 49914 / DSM 7097 / LX-11) RepID=F6BKF5_THEXL
microcompartments protein
Microcompartments protein {ECO:0000313|EMBL:AFK85252.1}; TaxID=1094508 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobacterium.;" source="Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485).;"
L2_019_119G1_scaffold_142_19
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

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comp(17420..17734)
DNA (315bp) protein (105aa)
Bacterial microcompartments protein n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5XFI6_9FIRM
Bacterial microcompartments protein {ECO:0000313|EMBL:CDA13600.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
Carbon dioxide concentrating mechanism/carboxysome shell protein
L2_019_119G1_scaffold_142_20
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17754..18968)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U813_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67286.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Threonine dehydrogenase and related Zn-dependent dehydrogenases
L2_019_119G1_scaffold_142_21
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18984..20390)
DNA (1407bp) protein (469aa)
Aldehyde Dehydrogenase_ n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KN57_CLOPH
aldehyde dehydrogenase
Aldehyde Dehydrogenase {ECO:0000313|EMBL:ABX41556.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L2_019_119G1_scaffold_142_22
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20360..20836)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TVF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67284.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Uncharacterized protein, possibly involved in utilization of glycolate and propanediol
L2_019_119G1_scaffold_142_23
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20859..21659)
DNA (801bp) protein (267aa)
Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases (EC:4.1.2.17)
L-ribulose-5-phosphate 4-epimerase n=3 Tax=Lachnospiraceae RepID=V8BQE1_RUMGN
Putative L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:EDN78610.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L2_019_119G1_scaffold_142_24
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21686..22108)
DNA (423bp) protein (141aa)
Ethanolamine/propanediol utilization protein PduV3 n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LGX2_ACEWD
pduV3; ethanolamine/propanediol utilization protein PduV3
Ethanolamine/propanediol utilization protein PduV3 {ECO:0000313|EMBL:AFA49636.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
L2_019_119G1_scaffold_142_25
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

Not on your lists

comp(22111..22479)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BJZ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD65827.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
microcompartments protein
L2_019_119G1_scaffold_142_26
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22504..23295)
DNA (792bp) protein (264aa)
glycyl-radical enzyme activating protein family (EC:1.97.1.4)
Putative pyruvate formate-lyase 1-activating enzyme n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QIC4_9CLOT
Putative pyruvate formate-lyase 1-activating enzyme {ECO:0000313|EMBL:EKY27420.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L2_019_119G1_scaffold_142_27
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23312..25834)
DNA (2523bp) protein (841aa)
glycerol dehydratase, cobalamin-independent, large subunit (EC:2.3.1.54 4.2.1.30)
Formate C-acetyltransferase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QHD0_9CLOT
Formate C-acetyltransferase {ECO:0000313|EMBL:EKY27419.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L2_019_119G1_scaffold_142_28
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

Not on your lists

comp(25848..26609)
DNA (762bp) protein (254aa)
Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BJ63_9FIRM
Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases {ECO:0000313|EMBL:CDD65825.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
class II aldolase/adducin family protein
L2_019_119G1_scaffold_142_29
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26736..27503)
DNA (768bp) protein (256aa)
Cof-like hydrolase n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KNM8_CLOPH
cof family hydrolase
Cof-like hydrolase {ECO:0000313|EMBL:ABX41629.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L2_019_119G1_scaffold_142_30
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27506..27934)
DNA (429bp) protein (143aa)
RbsD/FucU transport family protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDQ5_9CLOT
RbsD/FucU transport family protein {ECO:0000313|EMBL:EEG30402.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
fucU; fucose operon protein FucU
Displaying items 1-30 of 51 in total

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