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L2_019_119G1_scaffold_143

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_119G1_scaffold_143_1
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(114..956)
DNA (843bp) protein (281aa)
CAAX protease self-immunity family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4W117_CLOBI
CAAX protease self-immunity family protein {ECO:0000313|EMBL:EQK47303.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
hypothetical protein
L2_019_119G1_scaffold_143_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1505..3244
DNA (1740bp) protein (580aa)
ilvB2; acetolactate synthase isozyme 1 large subunit (EC:2.2.1.6)
Acetolactate synthase, large subunit, biosynthetic type n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z2R3_CLOBU
Acetolactate synthase, large subunit, biosynthetic type {ECO:0000313|EMBL:ENZ34171.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L2_019_119G1_scaffold_143_3
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3237..3533
DNA (297bp) protein (99aa)
Amino acid-binding ACT domain protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M5E4_9CLOT
Amino acid-binding ACT domain protein {ECO:0000313|EMBL:EHI99899.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
acetolactate synthase, small subunit
L2_019_119G1_scaffold_143_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3864..4805
DNA (942bp) protein (314aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=R0AWJ5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ36422.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
putative permease
L2_019_119G1_scaffold_143_5
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4878..6461)
DNA (1584bp) protein (528aa)
histidine kinase n=1 Tax=Clostridium botulinum RepID=UPI000370E5E3
sensory transduction protein kinase
Sensory transduction protein kinase {ECO:0000313|EMBL:ACD23590.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L2_019_119G1_scaffold_143_6
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6451..7143)
DNA (693bp) protein (231aa)
PhoB family transcriptional regulator n=1 Tax=Clostridium botulinum RepID=UPI0003170444
Response regulator {ECO:0000313|EMBL:AIY81168.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
regulatory protein VanR
L2_019_119G1_scaffold_143_7
unknown

Not on your lists

comp(7484..7624)
DNA (141bp) protein (47aa)
hypothetical protein
L2_019_119G1_scaffold_143_8
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7675..8997)
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MRY9_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX43559.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_019_119G1_scaffold_143_9
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9239..10258
DNA (1020bp) protein (340aa)
Guanine/hypoxanthine permease PbuO n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MSH7_CLOSA
pbuO; guanine/hypoxanthine permease PbuO
Guanine/hypoxanthine permease PbuO {ECO:0000313|EMBL:AGX43560.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_019_119G1_scaffold_143_10
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10296..10532
DNA (237bp) protein (79aa)
Guanine/hypoxanthine permease PbuO n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MSH7_CLOSA
pbuO; guanine/hypoxanthine permease PbuO
Guanine/hypoxanthine permease PbuO {ECO:0000313|EMBL:AGX43560.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_019_119G1_scaffold_143_11
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10624..12078)
DNA (1455bp) protein (485aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
Nicotinate phosphoribosyltransferase n=1 Tax=Clostridium sp. CAG:265 RepID=R6KVU9_9CLOT
nicotinate phosphoribosyltransferase
L2_019_119G1_scaffold_143_12
unknown

Not on your lists

comp(12068..12445)
DNA (378bp) protein (126aa)

This feature has no annotations

L2_019_119G1_scaffold_143_13
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12775..13977)
DNA (1203bp) protein (401aa)
Beta-lactamase n=1 Tax=Clostridium sp. CAG:510 RepID=R6CTD0_9CLOT
Beta-lactamase {ECO:0000313|EMBL:CDA68497.1}; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
Beta-lactamase class C and other penicillin binding proteins
L2_019_119G1_scaffold_143_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14148..15266)
DNA (1119bp) protein (373aa)
UPI0003D69A57 related cluster n=1 Tax=unknown RepID=UPI0003D69A57
Uncharacterized protein {ECO:0000313|EMBL:ETI88257.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
GDSL family lipase
L2_019_119G1_scaffold_143_15
unknown

Not on your lists

15551..15706
DNA (156bp) protein (52aa)

This feature has no annotations

L2_019_119G1_scaffold_143_16
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16151..16681)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6S0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96986.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
phosphoesterase, HXTX
L2_019_119G1_scaffold_143_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16954..18456
DNA (1503bp) protein (501aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AWN9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KHD16119.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
L2_019_119G1_scaffold_143_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18719..19522)
DNA (804bp) protein (268aa)
HAD superfamily hydrolase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K6N1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ86364.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Cof-like hydrolase
L2_019_119G1_scaffold_143_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19747..21078)
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AEC5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31134.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Serine-type D-Ala-D-Ala carboxypeptidase
L2_019_119G1_scaffold_143_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21405..23138)
DNA (1734bp) protein (578aa)
xenobiotic-transporting ATPase (EC:3.6.3.44)
UPI0003D62CA0 related cluster n=1 Tax=unknown RepID=UPI0003D62CA0
Lipid A export ATP-binding/permease protein MsbA {ECO:0000313|EMBL:ETI88242.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
L2_019_119G1_scaffold_143_21
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23422..25179)
DNA (1758bp) protein (586aa)
RNA helicase n=1 Tax=Clostridium botulinum RepID=UPI0003739807
ATP-dependent RNA helicase, superfamily II
Helicase domain protein {ECO:0000313|EMBL:EES47827.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
L2_019_119G1_scaffold_143_22
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25367..26284)
DNA (918bp) protein (306aa)
SufBD protein n=1 Tax=Clostridium sporogenes PA 3679 RepID=G9F529_CLOSG
SufBD protein {ECO:0000313|EMBL:EHN13491.1}; TaxID=1075091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes PA 3679.;"
ABC transporter system permease involved in Fe-S cluster assembly
L2_019_119G1_scaffold_143_23
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26288..27037)
DNA (750bp) protein (250aa)
ABC transporter related protein n=1 Tax=Clostridium sporogenes PA 3679 RepID=G9F528_CLOSG
ABC transporter family protein {ECO:0000313|EMBL:AJD30983.1}; TaxID=1408284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum Prevot_594.;"
ABC transporter
L2_019_119G1_scaffold_143_24
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27310..29049)
DNA (1740bp) protein (580aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MNX8_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF57913.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_019_119G1_scaffold_143_25
Desulfitobacterium dichloroeliminans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29169..30518)
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1) RepID=L0F837_DESDL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA68821.1}; TaxID=871963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1).;"
L2_019_119G1_scaffold_143_26
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30631..31530)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MV86_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX43556.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_019_119G1_scaffold_143_27
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31827..33995
DNA (2169bp) protein (723aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V425_CLOBA
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Diguanylate cyclase {ECO:0000313|EMBL:KIL07447.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L2_019_119G1_scaffold_143_28
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34187..35287
DNA (1101bp) protein (367aa)
Metal dependent phosphohydrolase n=1 Tax=Clostridium sp. DL-VIII RepID=G7M6Q5_9CLOT
Metal dependent phosphohydrolase {ECO:0000313|EMBL:EHJ01353.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
metal dependent phosphohydrolase
L2_019_119G1_scaffold_143_29
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35410..35772
DNA (363bp) protein (121aa)
Integral membrane protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V2V9_CLOBA
hypothetical protein
Membrane protein {ECO:0000313|EMBL:KIL07249.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L2_019_119G1_scaffold_143_30
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35806..36456)
DNA (651bp) protein (217aa)
Predicted membrane protein n=1 Tax=Roseburia sp. CAG:182 RepID=R7R282_9FIRM
Predicted membrane protein {ECO:0000313|EMBL:CDF43660.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
Predicted membrane protein
Displaying items 1-30 of 45 in total

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