ggKbase home page

L2_019_119G1_scaffold_152

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_119G1_scaffold_152_1
unknown

Not on your lists

3..68
DNA (66bp) protein (22aa)

This feature has no annotations

L2_019_119G1_scaffold_152_2
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(93..554)
DNA (462bp) protein (154aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
tRNA-dihydrouridine synthase (EC:1.-.-.-)
diguanylate cyclase n=1 Tax=Clostridium arbusti RepID=UPI0002896680
L2_019_119G1_scaffold_152_3
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(659..1126)
DNA (468bp) protein (156aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7TE58_CLOSG
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EDU38827.1}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes ATCC 15579.;"
acetyltransferase
L2_019_119G1_scaffold_152_4
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1300..1782)
DNA (483bp) protein (161aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R5YXB3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA32038.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
hypothetical protein
L2_019_119G1_scaffold_152_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2131..3525)
DNA (1395bp) protein (465aa)
Glutamate synthase , homotetrameric n=4 Tax=Clostridium butyricum RepID=B1QWW4_CLOBU
Glutamate synthase (NADPH), homotetrameric {ECO:0000313|EMBL:ENZ35694.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
oxidoreductase
L2_019_119G1_scaffold_152_6
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3525..4415)
DNA (891bp) protein (297aa)
2-polyprenylphenol hydroxylase-like oxidoreductase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MN29_CLOSA
2-polyprenylphenol hydroxylase-like oxidoreductase
2-polyprenylphenol hydroxylase-like oxidoreductase {ECO:0000313|EMBL:AGX41893.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_019_119G1_scaffold_152_7
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4433..5506)
DNA (1074bp) protein (358aa)
Theronine dehydrogenase-like Zn-dependent dehydrogenase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MWX5_9CLOT
theronine dehydrogenase-like Zn-dependent dehydrogenase
Theronine dehydrogenase-like Zn-dependent dehydrogenase {ECO:0000313|EMBL:AGF55972.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_019_119G1_scaffold_152_8
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5738..7678)
DNA (1941bp) protein (647aa)
ATPase AAA n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FQE0_CLOPA
ATPase AAA {ECO:0000313|EMBL:ETD65943.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
stc2; signal-transduction and transcriptional-control protein Stc
L2_019_119G1_scaffold_152_9
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7886..8281)
DNA (396bp) protein (132aa)
Putative membrane protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UR12_CLOBO
Membrane protein {ECO:0000313|EMBL:KIL06828.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
hypothetical protein
L2_019_119G1_scaffold_152_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8358..8903)
DNA (546bp) protein (182aa)
UPI0003D6610D related cluster n=1 Tax=unknown RepID=UPI0003D6610D
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
bsaA; glutathione peroxidase
L2_019_119G1_scaffold_152_11
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9683..10024)
DNA (342bp) protein (114aa)
Transcriptional regulator, HxlR family n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JHY2_CELLD
HxlR family transcriptional regulator
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:ADZ81926.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L2_019_119G1_scaffold_152_12
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10151..10969
DNA (819bp) protein (273aa)
Nitroreductase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MXQ0_CLOSA
nitroreductase
Nitroreductase {ECO:0000313|EMBL:AGX45333.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_019_119G1_scaffold_152_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11080..11550)
DNA (471bp) protein (157aa)
5-nitroimidazole antibiotic resistance protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JK70_CLOBU
5-nitroimidazole antibiotic resistance protein {ECO:0000313|EMBL:EEP53181.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
5-nitroimidazole antibiotic resistance protein
L2_019_119G1_scaffold_152_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11733..12107)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ESL7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETI88821.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
L2_019_119G1_scaffold_152_15
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12150..12629)
DNA (480bp) protein (160aa)
NUDIX hydrolase n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MKP9_ALKOO
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ABW20381.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain OhILAs) (Clostridium oremlandii; (strain OhILAs)).;"
L2_019_119G1_scaffold_152_16
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12850..14325)
DNA (1476bp) protein (492aa)
UPF0061 protein CLL_A1414 n=2 Tax=Clostridium botulinum B RepID=Y1414_CLOBB
UPF0061 protein
UPF0061 protein CM240_2925 {ECO:0000256|HAMAP-Rule:MF_00692}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L2_019_119G1_scaffold_152_17
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14775..15524
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HG41_9CLOT
Acyl-ACP thioesterase {ECO:0000313|EMBL:KGJ48628.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
acyl-ACP thioesterase family protein
L2_019_119G1_scaffold_152_18
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15790..16962)
DNA (1173bp) protein (391aa)
Phosphoribosylaminoimidazolecarboxamide formyltransferase {ECO:0000313|EMBL:ABR35683.1}; EC=2.1.2.3 {ECO:0000313|EMBL:ABR35683.1};; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
Phosphoribosylaminoimidazolecarboxamide formyltransferase n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LZA3_CLOB8
5-aminoimidazole-4-carboxamide ribonucleotide transformylase
L2_019_119G1_scaffold_152_19
unknown

Not on your lists

comp(17303..17458)
DNA (156bp) protein (52aa)

This feature has no annotations

L2_019_119G1_scaffold_152_20
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17847..19313
DNA (1467bp) protein (489aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2X2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97996.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L2_019_119G1_scaffold_152_21
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19593..20219
DNA (627bp) protein (209aa)
Flavin reductase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JE96_CLOBU
Iron-sulfur flavoprotein {ECO:0000313|EMBL:KJZ94117.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
multimeric flavodoxin WrbA
L2_019_119G1_scaffold_152_22
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20350..21144)
DNA (795bp) protein (265aa)
Glycosyl hydrolase, BNR repeat-containing protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LRF1_CLOB8
BNR repeat-containing glycosyl hydrolase {ECO:0000313|EMBL:AJG97447.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
BNR repeat-containing glycosyl hydrolase
L2_019_119G1_scaffold_152_23
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21226..21885)
DNA (660bp) protein (220aa)
BNR/Asp-box repeat protein n=3 Tax=Clostridium carboxidivorans P7 RepID=D6MBT4_9CLOT
BNR/Asp-box repeat protein
BNR/Asp-box repeat protein {ECO:0000313|EMBL:AKA69415.1}; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scatologenes.;"
L2_019_119G1_scaffold_152_24
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22293..23282)
DNA (990bp) protein (330aa)
Response regulator receiver modulated diguanylate cyclase n=1 Tax=Clostridium intestinale URNW RepID=U2Q5I1_9CLOT
Putative membrane-bound protein {ECO:0000313|EMBL:AJG99456.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
Related to two-component system response regulator (Hybrid family)
L2_019_119G1_scaffold_152_25
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23266..23850)
DNA (585bp) protein (195aa)
Chemotaxis response regulator protein-glutamate methylesterase CheB {ECO:0000313|EMBL:AJG99455.1}; EC=3.1.1.61 {ECO:0000313|EMBL:AJG99455.1};; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
Protein-glutamate methylesterase CheB n=4 Tax=Leptospira noguchii RepID=K8KWJ6_9LEPT
protein-glutamate methylesterase
L2_019_119G1_scaffold_152_26
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23899..24747)
DNA (849bp) protein (283aa)
MCP methyltransferase, CheR-type {ECO:0000313|EMBL:AJG99454.1}; EC=2.1.1.80 {ECO:0000313|EMBL:AJG99454.1};; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
chemotaxis protein CheR (EC:2.1.1.80)
Chemotaxis protein CheR n=1 Tax=Clostridium intestinale URNW RepID=U2N4Y8_9CLOT
L2_019_119G1_scaffold_152_27
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24744..28346)
DNA (3603bp) protein (1201aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
Putative signal transduction histidine kinase n=1 Tax=uncultured bacterium RepID=Q20JY9_9BACT
multi-sensor hybrid histidine kinase
L2_019_119G1_scaffold_152_28
unknown

Not on your lists

comp(28669..28839)
DNA (171bp) protein (57aa)

This feature has no annotations

L2_019_119G1_scaffold_152_29
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28922..29380)
DNA (459bp) protein (153aa)
Two component sensor kinase n=2 Tax=Clostridium botulinum B RepID=B2TJM4_CLOBB
His Kinase A domain protein {ECO:0000313|EMBL:AIY81991.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
two component sensor kinase
L2_019_119G1_scaffold_152_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29715..33518)
DNA (3804bp) protein (1268aa)
MnxG n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1UZ63_CLOPF
MnxG {ECO:0000313|EMBL:EDT73082.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
multicopper oxidase family protein
Displaying items 1-30 of 38 in total

View Taxonomy