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L2_019_119G1_scaffold_232

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_119G1_scaffold_232_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..535
DNA (534bp) protein (178aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
ATP-dependent Clp protease proteolytic subunit n=7 Tax=Bifidobacterium breve RepID=F9XYM8_BIFBU
ATP-dependent Clp protease proteolytic subunit
L2_019_119G1_scaffold_232_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

541..1224
DNA (684bp) protein (228aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1685 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve.;"
ATP-dependent Clp protease proteolytic subunit n=5 Tax=Bifidobacterium breve RepID=F9XYM9_BIFBU
ATP-dependent Clp protease proteolytic subunit
L2_019_119G1_scaffold_232_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1398..2759
DNA (1362bp) protein (454aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=5 Tax=Bifidobacterium breve RepID=F9XYN0_BIFBU
clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_019_119G1_scaffold_232_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3152..4357
DNA (1206bp) protein (402aa)
Putative hemolysin n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2DXD4_BIFBR
Cystathionine beta-lyase
Putative hemolysin {ECO:0000313|EMBL:ERI86307.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_019_119G1_scaffold_232_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4438..5826
DNA (1389bp) protein (463aa)
Na(+)/H(+) antiporter NhaA n=2 Tax=Bifidobacterium breve RepID=D4BNX3_BIFBR
Na/H antiporter nhaA
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_019_119G1_scaffold_232_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5865..6767
DNA (903bp) protein (301aa)
Lysine decarboxylase family n=4 Tax=Bifidobacterium breve RepID=F9XYN3_BIFBU
Lysine decarboxylase family
TIGR00730 family protein {ECO:0000313|EMBL:EFE89361.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ99805.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L2_019_119G1_scaffold_232_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6808..7473)
DNA (666bp) protein (222aa)
safC; Caffeoyl-CoA O-methyltransferase (EC:2.1.1.104)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=S2ZD89_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD74688.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L2_019_119G1_scaffold_232_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7536..8486)
DNA (951bp) protein (317aa)
Succinate dehydrogenase and fumarate reductase iron-sulfur protein n=3 Tax=Bifidobacterium breve RepID=F6C9Z6_BIFBA
Succinate dehydrogenase iron-sulfur protein
Succinate dehydrogenase and fumarate reductase iron-sulfur protein {ECO:0000313|EMBL:EFE89363.1}; Succinate dehydrogenase iron-sulfur subunit {ECO:0000313|EMBL:BAQ99807.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L2_019_119G1_scaffold_232_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8559..10460)
DNA (1902bp) protein (634aa)
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit n=4 Tax=Bifidobacterium breve RepID=D4BNX7_BIFBR
Succinate dehydrogenase flavoprotein subunit {ECO:0000313|EMBL:BAQ99808.1}; Succinate dehydrogenase or fumarate reductase, flavoprotein subunit {ECO:0000313|EMBL:EFE89364.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
succinate dehydrogenase or fumarate reductase, flavoprotein subunit
L2_019_119G1_scaffold_232_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10523..12142)
DNA (1620bp) protein (540aa)
DNA protecting protein DprA n=3 Tax=Bifidobacterium breve RepID=S2ZE92_BIFBR
DNA protecting protein DprA {ECO:0000313|EMBL:EPD74691.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Smf protein
L2_019_119G1_scaffold_232_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12139..13674)
DNA (1536bp) protein (512aa)
ATPase AAA n=1 Tax=Bifidobacterium breve RepID=UPI00030BC818
ATPase related to magnesium chelatase subunit ChlI
Mg chelatase-like protein {ECO:0000313|EMBL:EFE89366.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ99810.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L2_019_119G1_scaffold_232_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13689..14063)
DNA (375bp) protein (125aa)
UPF0102 protein HMPREF9228_1045 n=4 Tax=Bifidobacterium breve RepID=F6C9Z2_BIFBA
Endonuclease
UPF0102 protein B2258_0776 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_019_119G1_scaffold_232_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14281..14547)
DNA (267bp) protein (89aa)
ISMsm8, transposase n=2 Tax=Bifidobacterium breve RepID=H3L2X9_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI86297.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Transposase
L2_019_119G1_scaffold_232_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14752..14979
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Bifidobacterium breve RepID=UPI00036FD9F9
Uncharacterized protein {ECO:0000313|EMBL:ERI86395.1}; Flags: Fragment;; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
hypothetical protein
L2_019_119G1_scaffold_232_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15079..15951)
DNA (873bp) protein (291aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
Uncharacterized protein n=5 Tax=Bifidobacterium breve RepID=S2ZK18_BIFBR
Pyridoxine kinase
L2_019_119G1_scaffold_232_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16504..17820
DNA (1317bp) protein (439aa)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase n=4 Tax=Bifidobacterium breve RepID=F6C9Y9_BIFBA
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase
O-acetylhomoserine aminocarboxypropyltransferase {ECO:0000313|EMBL:AHJ19079.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L2_019_119G1_scaffold_232_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18278..19204
DNA (927bp) protein (309aa)
ATP-binding protein of ABC transporter system n=2 Tax=Bifidobacterium breve RepID=F9XYW9_BIFBU
ATP-binding protein of ABC transporter system
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI86390.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_019_119G1_scaffold_232_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19236..21974
DNA (2739bp) protein (913aa)
Efflux ABC transporter, permease protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2C7C7_BIFBR
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:ERI86389.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
efflux ABC transporter permease
L2_019_119G1_scaffold_232_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22263..23078)
DNA (816bp) protein (272aa)
Response regulator receiver domain protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C9Y6_BIFBA
Two-component response regulator
Response regulator receiver domain protein {ECO:0000313|EMBL:AEF26575.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_019_119G1_scaffold_232_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23091..25559)
DNA (2469bp) protein (823aa)
Histidine kinase n=2 Tax=Bifidobacterium breve RepID=U2DXJ2_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD74700.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
bbukinD; Two component system histidine kinase
L2_019_119G1_scaffold_232_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25641..27119
DNA (1479bp) protein (493aa)
Hydrolase, alpha/beta domain protein n=6 Tax=Bifidobacterium breve RepID=F6C9Y4_BIFBA
Proline iminopeptidase
Hydrolase, alpha/beta domain protein {ECO:0000313|EMBL:AEF27228.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_019_119G1_scaffold_232_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27266..28087
DNA (822bp) protein (274aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Pyrroline-5-carboxylate reductase n=2 Tax=Bifidobacterium breve RepID=S2ZXC9_BIFBR
Pyrroline-5-carboxylate reductase
L2_019_119G1_scaffold_232_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28228..29076)
DNA (849bp) protein (283aa)
ABC transporter, substrate-binding protein, family 3 n=4 Tax=Bifidobacterium breve RepID=F6C9Y2_BIFBA
Glutamine-binding protein glnH
Uncharacterized protein {ECO:0000313|EMBL:EPD74703.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L2_019_119G1_scaffold_232_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29146..29934)
DNA (789bp) protein (263aa)
ABC transporter, ATP-binding protein n=2 Tax=Bifidobacterium breve RepID=F6C9Y1_BIFBA
gluA_2; glutamate ABC transporter, ATP-binding protein GluA
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AEF27470.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_019_119G1_scaffold_232_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29927..30634)
DNA (708bp) protein (236aa)
ABC transporter, permease protein n=5 Tax=Bifidobacterium breve RepID=F6C9Y0_BIFBA
Glutamine transport system permease protein glnP
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region {ECO:0000313|EMBL:EPD74705.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L2_019_119G1_scaffold_232_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30612..31274)
DNA (663bp) protein (221aa)
polar amino acid ABC transporter permease n=1 Tax=Bifidobacterium breve RepID=UPI000316EE5D
Glutamine transport system permease protein glnP
Glutamine transport system permease protein glnP {ECO:0000313|EMBL:AHJ19089.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L2_019_119G1_scaffold_232_27
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31550..32809
DNA (1260bp) protein (420aa)
Ribosome-binding ATPase YchF n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZXD2_BIFBR
GTP-binding protein, probable translation factor
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Displaying 27 items

View Taxonomy