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L2_019_119G1_scaffold_236

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_119G1_scaffold_236_1
unknown

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203..355
DNA (153bp) protein (51aa)

This feature has no annotations

L2_019_119G1_scaffold_236_2
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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379..1017
DNA (639bp) protein (213aa)
DTW domain-containing protein YfiP n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MSA8_CLOSA
yfiP; DTW domain-containing protein YfiP
DTW domain-containing protein YfiP {ECO:0000313|EMBL:AGX43480.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_019_119G1_scaffold_236_3
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1642..2532
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PRL0_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKA68085.1}; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scatologenes.;"
L2_019_119G1_scaffold_236_4
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2572..3156
DNA (585bp) protein (195aa)
DJ-1/PfpI family protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PNU8_9CLOT
ThiJ/PfpI domain protein {ECO:0000313|EMBL:EET89026.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
ThiJ/PfpI domain protein
L2_019_119G1_scaffold_236_5
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3242..4006)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum BC1 RepID=R4K2Z6_CLOPA
Putative nucleic acid binding, OB-fold, tRNA/helicase-type {ECO:0000313|EMBL:KIE45261.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L2_019_119G1_scaffold_236_6
Bacteroides pectinophilus CAG:437, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4358..4792
DNA (435bp) protein (145aa)
Uncharacterized protein n=2 Tax=Bacteria RepID=R7AS91_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD56406.1}; TaxID=1263051 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides pectinophilus CAG:437.;"
transcriptional regulator, BadM/Rrf2 family
L2_019_119G1_scaffold_236_7
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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4913..5854
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KXZ4_OSCVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK98598.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L2_019_119G1_scaffold_236_8
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6220..7149
DNA (930bp) protein (310aa)
cysteine synthase (EC:2.5.1.47)
Cysteine synthase n=1 Tax=Clostridium sp. CAG:352 RepID=R6QML1_9CLOT
Cysteine synthase {ECO:0000313|EMBL:CDC37858.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
L2_019_119G1_scaffold_236_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7483..8520
DNA (1038bp) protein (346aa)
Sulfate-binding protein (Sulfate starvation-induced protein) n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JIL4_CLOBU
Sulfate and thiosulfate binding protein CysP {ECO:0000313|EMBL:KJZ83486.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
sbp; Sulfate-binding protein
L2_019_119G1_scaffold_236_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8587..9435
DNA (849bp) protein (283aa)
Sulfate ABC transporter, permease CysT n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z944_CLOBU
Sulfate ABC transporter, permease CysT {ECO:0000313|EMBL:ENZ36275.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
cysT; putative sulfate transport system permease protein cysT
L2_019_119G1_scaffold_236_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9445..10278
DNA (834bp) protein (278aa)
UPI0003D5BA3F related cluster n=1 Tax=unknown RepID=UPI0003D5BA3F
Sulfate ABC transporter, permease protein CysW {ECO:0000313|EMBL:ETI90630.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
cysW; Sulfate transport system permease protein CysW
L2_019_119G1_scaffold_236_12
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10268..11329
DNA (1062bp) protein (354aa)
Sulfate-transporting ATPase {ECO:0000256|SAAS:SAAS00085229}; EC=3.6.3.25 {ECO:0000256|SAAS:SAAS00085229};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
cysA; Sulfate/thiosulfate import ATP-binding protein CysA (EC:3.6.3.25)
Sulfate ABC transporter, ATPase subunit n=1 Tax=Clostridium sp. DL-VIII RepID=G7MB57_9CLOT
L2_019_119G1_scaffold_236_13
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11366..13105
DNA (1740bp) protein (580aa)
Adenylylsulfate reductase subunit alpha n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G8D0_CLOPA
Adenylylsulfate reductase subunit alpha {ECO:0000313|EMBL:ETD71942.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
adenylylsulfate reductase subunit alpha
L2_019_119G1_scaffold_236_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13089..13403
DNA (315bp) protein (105aa)
Adenylylsulfate reductase beta-subunit {ECO:0000313|EMBL:KJZ83531.1}; EC=1.8.99.2 {ECO:0000313|EMBL:KJZ83531.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JIL2_CLOBU
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
L2_019_119G1_scaffold_236_15
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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13563..14462
DNA (900bp) protein (300aa)
Sulfate adenylyltransferase subunit 2 {ECO:0000256|HAMAP-Rule:MF_00064}; EC=2.7.7.4 {ECO:0000256|HAMAP-Rule:MF_00064};; ATP-sulfurylase small subunit {ECO:0000256|HAMAP-Rule:MF_00064}; Sulfate adenylate transferase {ECO:0000256|HAMAP-Rule:MF_00064}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
cysD; Sulfate adenylyltransferase subunit 2 (EC:2.7.7.4)
Sulfate adenylyltransferase subunit 2 n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KS18_9FIRM
L2_019_119G1_scaffold_236_16
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14413..16155
DNA (1743bp) protein (581aa)
cysN; sulfate adenylyltransferase subunit 1 (EC:2.7.7.4)
Sulfate adenylyltransferase subunit 1 {ECO:0000256|SAAS:SAAS00056000}; EC=2.7.7.4 {ECO:0000256|SAAS:SAAS00055979};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Sulfate adenylyltransferase subunit 1 n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MZ96_CLOSA
L2_019_119G1_scaffold_236_17
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16658..17206
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FIS1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMS70096.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
hypothetical protein
L2_019_119G1_scaffold_236_18
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17297..17803
DNA (507bp) protein (169aa)
Transcriptional regulator n=1 Tax=Clostridium pasteurianum BC1 RepID=R4KII9_CLOPA
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGK99440.1}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
L2_019_119G1_scaffold_236_19
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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17980..18789
DNA (810bp) protein (270aa)
Hydrolase, alpha/beta domain protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CT31_9FIRM
Hydrolase, alpha/beta domain protein {ECO:0000313|EMBL:ERI93659.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
alpha/beta hydrolase
L2_019_119G1_scaffold_236_20
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19037..20257
DNA (1221bp) protein (407aa)
Chloride channel protein EriC n=2 Tax=Clostridium butyricum RepID=M8JLV2_CLOBU
Voltage-gated chloride channel protein {ECO:0000313|EMBL:KEZ90767.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
Chloride ion channel protein
L2_019_119G1_scaffold_236_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20495..21259
DNA (765bp) protein (255aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JD10_CLOBU
Ureidoglycine aminohydrolase {ECO:0000313|EMBL:KJZ88549.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
uncharacterized protein, possibly involved in glyoxylate utilization
L2_019_119G1_scaffold_236_22
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21486..21929)
DNA (444bp) protein (148aa)
Regulatory protein n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EGH2_CLOPA
transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EET84748.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
L2_019_119G1_scaffold_236_23
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22226..22636
DNA (411bp) protein (137aa)
Cupin n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EEW0_CLOPA
hypothetical protein
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:EET84749.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
L2_019_119G1_scaffold_236_24
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22688..23014
DNA (327bp) protein (109aa)
Carboxymuconolactone decarboxylase n=1 Tax=Clostridium sp. DL-VIII RepID=G7LZ88_9CLOT
Carboxymuconolactone decarboxylase {ECO:0000313|EMBL:EHI97661.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
4-carboxymuconolactone decarboxylase
L2_019_119G1_scaffold_236_25
Paenibacillus sp. FSL R7-0273, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23132..23971
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Paenibacillus massiliensis RepID=UPI00036F9A6B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIQ46480.1}; TaxID=1536772 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R7-0273.;"
L2_019_119G1_scaffold_236_26
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24003..25160
DNA (1158bp) protein (386aa)
patB1; cystathionine beta-lyase PatB (EC:4.4.1.8)
Cystathionine beta-lyase PatB {ECO:0000313|EMBL:AGF56664.1}; EC=4.4.1.8 {ECO:0000313|EMBL:AGF56664.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Cystathionine beta-lyase PatB n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MFH4_9CLOT
L2_019_119G1_scaffold_236_27
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25204..26529
DNA (1326bp) protein (442aa)
Mate efflux family protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MGU6_9CLOT
mate efflux family protein
Mate efflux family protein {ECO:0000313|EMBL:AGF55563.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_019_119G1_scaffold_236_28
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26924..27679)
DNA (756bp) protein (252aa)
Iron chelate uptake ABC transporter, FeCT family, ATP-binding protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UR70_CLOBO
ABC transporter {ECO:0000313|EMBL:KEZ86798.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
iron chelate uptake ABC transporter, FeCT family, ATP-binding protein
L2_019_119G1_scaffold_236_29
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27676..28740)
DNA (1065bp) protein (355aa)
ABC transporter n=1 Tax=Clostridium botulinum RepID=UPI000382A83C
HmuU protein
HmuU protein {ECO:0000313|EMBL:EES49969.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
L2_019_119G1_scaffold_236_30
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28733..29746)
DNA (1014bp) protein (338aa)
Putative iron compound ABC transporter, periplasmic iron compound-binding protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UR72_CLOBO
Putative iron compound ABC transporter, periplasmic iron compound-binding protein {ECO:0000313|EMBL:EES48699.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
putative iron compound ABC transporter periplasmic iron compound-binding protein
Displaying items 1-30 of 33 in total

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