ggKbase home page

L2_019_119G1_scaffold_244

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_119G1_scaffold_244_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..133
DNA (132bp) protein (44aa)
eno; Enolase (EC:4.2.1.11)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Enolase n=16 Tax=Bifidobacterium RepID=ENO_BIFLD
L2_019_119G1_scaffold_244_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

224..835
DNA (612bp) protein (204aa)
Septum formation initiator n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DSV1_BIFLD
septum formation initiator
Septum formation initiator {ECO:0000313|EMBL:ACD98220.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_019_119G1_scaffold_244_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

832..1398
DNA (567bp) protein (189aa)
Uncharacterized protein n=8 Tax=Bifidobacterium longum RepID=B3DSV0_BIFLD
hypothetical protein
Septum formation initiator family protein {ECO:0000313|EMBL:AIW43565.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_019_119G1_scaffold_244_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1461..2462
DNA (1002bp) protein (334aa)
Exopolyphosphatase n=6 Tax=Bifidobacterium longum RepID=B3DSU9_BIFLD
exopolyphosphatase
Ppx/GppA phosphatase family protein {ECO:0000313|EMBL:EIJ23895.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_019_119G1_scaffold_244_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2893..3462
DNA (570bp) protein (190aa)
Uncharacterized protein n=14 Tax=Bifidobacterium longum RepID=B3DSU8_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIJ23877.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_019_119G1_scaffold_244_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3609..5069
DNA (1461bp) protein (487aa)
L-serine dehydratase n=9 Tax=Bifidobacterium longum RepID=Q8G5J3_BIFLO
L-serine dehydratase
L-serine deaminase {ECO:0000313|EMBL:ACD98216.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_019_119G1_scaffold_244_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5211..5618
DNA (408bp) protein (136aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
Peptidyl-prolyl cis-trans isomerase n=16 Tax=Bifidobacterium RepID=B3DSU6_BIFLD
peptidyl-prolyl isomerase
L2_019_119G1_scaffold_244_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5717..6196
DNA (480bp) protein (160aa)
Transcription elongation factor GreA n=18 Tax=Bifidobacterium RepID=B3DSU5_BIFLD
transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00003926}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_019_119G1_scaffold_244_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6251..7162)
DNA (912bp) protein (304aa)
Predicted membrane protein, hemolysin III homolog n=12 Tax=Bifidobacterium RepID=D6D989_BIFLN
hypothetical protein
Hemolysin III {ECO:0000313|EMBL:AIW43570.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_019_119G1_scaffold_244_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7320..8093
DNA (774bp) protein (258aa)
Uncharacterized protein n=4 Tax=Bifidobacterium longum subsp. longum RepID=C2GUA6_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EEI81033.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
hypothetical protein
L2_019_119G1_scaffold_244_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8256..9743
DNA (1488bp) protein (496aa)
Histidine kinase-like protein n=17 Tax=Bifidobacterium RepID=Q8G5J8_BIFLO
two-component sensor kinase
Histidine kinase {ECO:0000313|EMBL:KHD96073.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
L2_019_119G1_scaffold_244_12
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9816..10094)
DNA (279bp) protein (93aa)
Transcriptional regulator WhiB1 n=23 Tax=Bifidobacterium RepID=WHIB1_BIFLO
transcription factor WhiB
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
L2_019_119G1_scaffold_244_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10208..12034)
DNA (1827bp) protein (609aa)
DNA segregation ATPase n=11 Tax=Bifidobacterium RepID=B3DSU0_BIFLD
hypothetical protein
Cell division protein FtsK {ECO:0000313|EMBL:KEY21896.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L2_019_119G1_scaffold_244_14
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12204..13637)
DNA (1434bp) protein (478aa)
Transcriptional regulator n=6 Tax=Bifidobacterium RepID=B3DST9_BIFLD
lytR; transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CCY95601.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L2_019_119G1_scaffold_244_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13888..14187
DNA (300bp) protein (100aa)
Transcriptional regulator WhiB2 n=15 Tax=Bifidobacterium RepID=WHIB2_BIFLO
transcriptional regulator
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L2_019_119G1_scaffold_244_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14231..17326
DNA (3096bp) protein (1032aa)
Uncharacterized protein n=8 Tax=Bifidobacterium longum RepID=Q8G5K2_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN24815.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L2_019_119G1_scaffold_244_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17323..18864
DNA (1542bp) protein (514aa)
Uncharacterized protein n=8 Tax=Bifidobacterium RepID=B3DST6_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW43576.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_019_119G1_scaffold_244_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18967..19395)
DNA (429bp) protein (143aa)
Uncharacterized protein n=18 Tax=Bifidobacterium RepID=Q8G5K4_BIFLO
peptidase
Uncharacterized protein {ECO:0000313|EMBL:EEQ54845.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L2_019_119G1_scaffold_244_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19484..20290
DNA (807bp) protein (269aa)
Phosphomannomutase {ECO:0000313|EMBL:ESV33223.1}; EC=5.4.2.2 {ECO:0000313|EMBL:ESV33223.1};; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
HAD-superfamily hydrolase, subfamily IIB n=7 Tax=Bifidobacterium RepID=D6D981_BIFLN
hypothetical protein
L2_019_119G1_scaffold_244_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20300..21022
DNA (723bp) protein (241aa)
Phosphoribosyl transferase domain protein n=2 Tax=Bifidobacterium longum RepID=C2GU95_BIFLN
Phosphoribosyl transferase domain protein {ECO:0000313|EMBL:EEI81022.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
hypothetical protein
L2_019_119G1_scaffold_244_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20938..21324)
DNA (387bp) protein (129aa)
SOS-response transcriptional repressor n=11 Tax=Bifidobacterium RepID=B3DST2_BIFLD
lexA2; lexa2
Peptidase S24 {ECO:0000313|EMBL:KEY32632.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L2_019_119G1_scaffold_244_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21392..22465)
DNA (1074bp) protein (358aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
Histidine kinase sensor of two-component system n=17 Tax=Bifidobacterium RepID=Q8G5K8_BIFLO
two-component sensor kinase
L2_019_119G1_scaffold_244_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22465..23187)
DNA (723bp) protein (241aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=19 Tax=Bifidobacterium RepID=D6D978_BIFLN
two-component response regulator
Chemotaxis protein CheY {ECO:0000313|EMBL:AIW43581.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_019_119G1_scaffold_244_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23223..25475)
DNA (2253bp) protein (751aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
1,4-alpha-glucan branching enzyme GlgB n=3 Tax=Bifidobacterium RepID=E8MHN7_BIFL2
glycosyl hydrolase
L2_019_119G1_scaffold_244_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25653..26246
DNA (594bp) protein (198aa)
Transcriptional_regulator n=10 Tax=Bifidobacterium longum RepID=B3DSS8_BIFLD
transcriptional regulator
CarD-like protein {ECO:0000313|EMBL:EIJ23904.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L2_019_119G1_scaffold_244_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26355..26879
DNA (525bp) protein (175aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=3 Tax=Bifidobacterium RepID=C2GU89_BIFLN
L2_019_119G1_scaffold_244_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26931..27764)
DNA (834bp) protein (278aa)
ABC-type Mn2+/Zn2+ transport systems permease component n=14 Tax=Bifidobacterium RepID=B3DSS6_BIFLD
ABC transporter permease
ABC 3 transport family protein {ECO:0000313|EMBL:EEI81015.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L2_019_119G1_scaffold_244_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27831..28721)
DNA (891bp) protein (297aa)
ABC-type Mn2+/Zn2+ transport systems ATPase component n=14 Tax=Bifidobacterium RepID=B3DSS5_BIFLD
ABC transporter ATP-binding protein
ABC-type Mn2+/Zn2+ transport systems ATPase component {ECO:0000313|EMBL:ACD98194.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_019_119G1_scaffold_244_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28894..30090)
DNA (1197bp) protein (399aa)
ABC-type Mn2+/Zn2+ transport system periplasmic component n=8 Tax=Bifidobacterium RepID=B3DSS4_BIFLD
ABC transporter substrate-binding protein
ABC transporter substrate binding component {ECO:0000313|EMBL:BAJ70785.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L2_019_119G1_scaffold_244_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30194..31069
DNA (876bp) protein (292aa)
Bifunctional protein FolD n=18 Tax=Bifidobacterium RepID=FOLD_BIFLO
methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Displaying items 1-30 of 31 in total

View Taxonomy