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L2_019_119G1_scaffold_255

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_119G1_scaffold_255_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(1..1788)
DNA (1788bp) protein (596aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
DNA gyrase subunit A n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G6K6_BIFLO
DNA gyrase subunit A
L2_019_119G1_scaffold_255_2
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1856..3994)
DNA (2139bp) protein (713aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Bifidobacterium longum RepID=UPI00003935AC
L2_019_119G1_scaffold_255_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4127..4597)
DNA (471bp) protein (157aa)
Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives n=9 Tax=Bifidobacterium RepID=D6DAZ3_BIFLN
hypothetical protein
PF05258 family protein {ECO:0000313|EMBL:EIJ32403.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L2_019_119G1_scaffold_255_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4594..5832)
DNA (1239bp) protein (413aa)
DNA replication and repair protein RecF n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5E980_BIFLI
DNA repair protein RecF
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|SAAS:SAAS00122784}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_019_119G1_scaffold_255_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5860..6984)
DNA (1125bp) protein (375aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
DNA polymerase III subunit beta n=17 Tax=Bifidobacterium RepID=B3DP21_BIFLD
DNA polymerase III subunit beta
L2_019_119G1_scaffold_255_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7089..7634)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G6K1_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN24461.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L2_019_119G1_scaffold_255_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7720..9222)
DNA (1503bp) protein (501aa)
Chromosomal replication initiator protein DnaA n=16 Tax=Bifidobacterium RepID=DNAA_BIFLD
dnaA; dnaa
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_019_119G1_scaffold_255_8
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


9541..9675
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=6 Tax=Bifidobacterium longum RepID=D6DAZ7_BIFLN
LSU ribosomal protein L34P
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
L2_019_119G1_scaffold_255_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9708..10067
DNA (360bp) protein (120aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
Ribonuclease P protein component n=17 Tax=Bifidobacterium RepID=RNPA_BIFLD
ribonuclease P
L2_019_119G1_scaffold_255_10
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10378..11385
DNA (1008bp) protein (336aa)
Membrane protein insertase YidC n=12 Tax=Bifidobacterium RepID=YIDC_BIFLO
yidC2; preprotein translocase subunit
YidC/Oxa1 family membrane protein insertase {ECO:0000313|EMBL:EFV37637.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L2_019_119G1_scaffold_255_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11509..12042
DNA (534bp) protein (178aa)
Uncharacterized protein n=12 Tax=Bifidobacterium RepID=Q8G6J5_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEY30885.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L2_019_119G1_scaffold_255_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12194..12859
DNA (666bp) protein (222aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
Ribosomal RNA small subunit methyltransferase G n=12 Tax=Bifidobacterium RepID=RSMG_BIFLD
glucose-inhibited division protein
L2_019_119G1_scaffold_255_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13110..14081
DNA (972bp) protein (324aa)
Chromosome segregation ATPase n=7 Tax=Bifidobacterium RepID=D6DB01_BIFLN
chromosome segregation ATPase
Chromosome partitioning protein ParA {ECO:0000313|EMBL:KFI73202.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L2_019_119G1_scaffold_255_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14081..15442
DNA (1362bp) protein (454aa)
Chromosome partitioning protein ParB n=10 Tax=Bifidobacterium RepID=F8APE1_BIFLN
chromosome partitioning protein ParB
Chromosome partitioning protein ParB {ECO:0000313|EMBL:KEY30888.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L2_019_119G1_scaffold_255_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15749..16768)
DNA (1020bp) protein (340aa)
Thioredoxin reductase n=7 Tax=Bacteria RepID=E8MFW1_BIFL2
thioredoxin reductase
Thioredoxin reductase {ECO:0000313|EMBL:BAJ67588.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L2_019_119G1_scaffold_255_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16888..18951)
DNA (2064bp) protein (688aa)
Putative membrane spanning protein n=1 Tax=Bifidobacterium longum E18 RepID=V6Y127_BIFLN
Putative membrane spanning protein {ECO:0000313|EMBL:ESV34486.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
hypothetical protein
L2_019_119G1_scaffold_255_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19034..20761)
DNA (1728bp) protein (576aa)
Integral membrane protein MviN n=8 Tax=Bifidobacterium RepID=E5XXQ8_9BIFI
hypothetical protein
Membrane protein {ECO:0000313|EMBL:KEY33271.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L2_019_119G1_scaffold_255_18
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20758..23028)
DNA (2271bp) protein (757aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5NFK8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY96126.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
hypothetical protein
L2_019_119G1_scaffold_255_19
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23025..24317)
DNA (1293bp) protein (431aa)
ADP-ribose pyrophosphatase n=2 Tax=Bifidobacterium RepID=E4R1P5_BIFLM
ADP-ribose pyrophosphatase
NUDIX domain-containing protein {ECO:0000313|EMBL:EFV37628.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L2_019_119G1_scaffold_255_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24404..25819
DNA (1416bp) protein (472aa)
Putative RNA nucleotidyltransferase n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MWG7_BIFL1
RNA nucleotidyltransferase
Putative RNA nucleotidyltransferase {ECO:0000313|EMBL:BAJ72111.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L2_019_119G1_scaffold_255_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25904..26533)
DNA (630bp) protein (210aa)
Uncharacterized protein n=14 Tax=Bifidobacterium RepID=B3DP36_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD98895.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L2_019_119G1_scaffold_255_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26580..27530)
DNA (951bp) protein (317aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=10 Tax=Bifidobacterium RepID=ISPE_BIFLO
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
L2_019_119G1_scaffold_255_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(27527..28453)
DNA (927bp) protein (309aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZX39_BIFLJ
ksgA; dimethyladenosine transferase
L2_019_119G1_scaffold_255_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28486..29973)
DNA (1488bp) protein (496aa)
Putative secreted protein with G5 and DUF348 domain n=1 Tax=Bifidobacterium longum E18 RepID=V6XZ60_BIFLN
lytic transglycosylase
Lytic transglycosylase {ECO:0000313|EMBL:AIW43079.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L2_019_119G1_scaffold_255_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30492..30758)
DNA (267bp) protein (89aa)
Protein-disulfide isomerase n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2HYT6_BIFLN
hypothetical protein
Protein-disulfide isomerase {ECO:0000313|EMBL:ACD98899.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
Displaying 25 items

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