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L2_019_119G1_scaffold_263

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_119G1_scaffold_263_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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410..1999
DNA (1590bp) protein (530aa)
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3 3.5.4.10)
Bifunctional purine biosynthesis protein PurH n=6 Tax=Escherichia coli RepID=T6GKS7_ECOLX
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L2_019_119G1_scaffold_263_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2011..3300
DNA (1290bp) protein (430aa)
purD; phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
Phosphoribosylamine--glycine ligase n=229 Tax=Escherichia RepID=PUR2_ECOL6
L2_019_119G1_scaffold_263_3
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3297..4622)
DNA (1326bp) protein (442aa)
Transcriptional regulatory protein zraR n=35 Tax=Escherichia coli RepID=E2QJ30_ECOLX
transcriptional regulatory protein ZraR
Transcriptional regulatory protein ZraR {ECO:0000313|EMBL:CDC75881.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
L2_019_119G1_scaffold_263_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4619..5995)
DNA (1377bp) protein (459aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=585397 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O81 (strain ED1a).;"
Sensor protein zraS (EC 27133) n=32 Tax=Escherichia coli RepID=E2QJ29_ECOLX
zraS; sensor protein ZraS
L2_019_119G1_scaffold_263_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6102..6230
DNA (129bp) protein (43aa)
Uncharacterized protein n=282 Tax=Escherichia coli RepID=B1LNV5_ECOSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQP41871.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L2_019_119G1_scaffold_263_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6233..6652
DNA (420bp) protein (140aa)
Zinc resistance-associated protein n=62 Tax=Escherichia coli RepID=E2QJ28_ECOLX
zraP; Zinc resistance-associated protein
Zinc resistance-associated protein {ECO:0000313|EMBL:EZJ47885.1}; TaxID=1444228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C2.;"
L2_019_119G1_scaffold_263_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6654..7289)
DNA (636bp) protein (212aa)
Uncharacterized protein n=119 Tax=Enterobacteriaceae RepID=C3SI37_ECOLX
yjaH; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOW03608.1}; TaxID=1182698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE98.;"
L2_019_119G1_scaffold_263_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7362..7634)
DNA (273bp) protein (91aa)
DNA-binding protein HU-alpha n=1444 Tax=Enterobacteriaceae RepID=DBHA_ECO57
transcriptional regulator HU subunit alpha
DNA-binding protein HU-alpha {ECO:0000313|EMBL:EFJ84259.1}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 84-1.;"
L2_019_119G1_scaffold_263_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7821..8411)
DNA (591bp) protein (197aa)
Uncharacterized protein yjaG n=471 Tax=Escherichia RepID=E2QJ25_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETE20033.1}; TaxID=1417796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli LAU-EC10.;"
L2_019_119G1_scaffold_263_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8454..9125)
DNA (672bp) protein (224aa)
Endonuclease V {ECO:0000256|HAMAP-Rule:MF_00801}; EC=3.1.21.7 {ECO:0000256|HAMAP-Rule:MF_00801};; Deoxyinosine 3'endonuclease {ECO:0000256|HAMAP-Rule:MF_00801}; Deoxyribonuclease V {ECO:0000256|HAMAP-Rule:MF_00801}; TaxID=1116136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021561.2.;"
Endonuclease V n=1 Tax=Escherichia coli IS5 RepID=V6EQL2_ECOLX
nfi; endonuclease V
L2_019_119G1_scaffold_263_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9135..10199)
DNA (1065bp) protein (355aa)
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554};; TaxID=868137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1E.;"
Uroporphyrinogen decarboxylase n=273 Tax=Escherichia RepID=DCUP_ECO27
L2_019_119G1_scaffold_263_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10239..11012)
DNA (774bp) protein (258aa)
nudC; NADH pyrophosphatase (EC:3.6.1.-)
NADH pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00297, ECO:0000256|SAAS:SAAS00016168}; EC=3.6.1.22 {ECO:0000256|HAMAP-Rule:MF_00297, ECO:0000256|SAAS:SAAS00016202};; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
NADH pyrophosphatase n=228 Tax=Escherichia coli RepID=NUDC_ECO27
L2_019_119G1_scaffold_263_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11107..11583
DNA (477bp) protein (159aa)
Regulator of sigma D n=203 Tax=Escherichia RepID=RSD_ECO45
rsd; Regulator of sigma D
Regulator of sigma D {ECO:0000256|HAMAP-Rule:MF_01181, ECO:0000256|SAAS:SAAS00010112}; TaxID=868140 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2C.;"
L2_019_119G1_scaffold_263_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11816..13711
DNA (1896bp) protein (632aa)
Phosphomethylpyrimidine synthase {ECO:0000255|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000255|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00089}; Short=HMP-P synthase {ECO:0000255|HAMAP-Rule:MF_00089};; Short=HMP-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00089};; Short=HMPP synthase {ECO:0000255|HAMAP-Rule:MF_00089};; Thiamine biosynthesis protein ThiC {ECO:0000255|HAMAP-Rule:MF_00089}; TaxID=362663 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O6:K15:H31 (strain 536 / UPEC).;"
Phosphomethylpyrimidine synthase n=32 Tax=Escherichia coli RepID=THIC_ECOL5
thiamine biosynthesis protein ThiC
L2_019_119G1_scaffold_263_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13711..14346
DNA (636bp) protein (212aa)
thiamine-phosphate pyrophosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
Thiamine-phosphate synthase n=33 Tax=Escherichia coli RepID=THIE_ECOL5
L2_019_119G1_scaffold_263_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14339..15094
DNA (756bp) protein (252aa)
adenylyltransferase (EC:2.7.7.-)
Sulfur carrier protein ThiS adenylyltransferase n=6 Tax=Escherichia coli RepID=T6GKU1_ECOLX
Sulfur carrier protein ThiS adenylyltransferase {ECO:0000313|EMBL:EQP41882.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L2_019_119G1_scaffold_263_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15078..15278
DNA (201bp) protein (67aa)
Sulphur carrier protein n=59 Tax=Escherichia coli RepID=B7N2J3_ECO81
sulfur carrier protein ThiS
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:EZJ34288.1}; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
L2_019_119G1_scaffold_263_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15280..16050
DNA (771bp) protein (257aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
Thiazole synthase n=7 Tax=Escherichia coli RepID=T6GJJ4_ECOLX
thiG; thiazole synthase
L2_019_119G1_scaffold_263_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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16047..17180
DNA (1134bp) protein (378aa)
Thiamin biosynthesis ThiGH complex subunit n=29 Tax=Escherichia coli RepID=B7MRB5_ECO81
thiH; thiamine biosynthesis protein ThiH
Thiazole biosynthesis protein ThiH {ECO:0000313|EMBL:EZJ47871.1}; TaxID=1444228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C2.;"
L2_019_119G1_scaffold_263_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17422..21645)
DNA (4224bp) protein (1408aa)
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1444181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C3.;"
DNA-directed RNA polymerase subunit beta' n=1003 Tax=Enterobacteriaceae RepID=RPOC_ECO24
L2_019_119G1_scaffold_263_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21722..25750)
DNA (4029bp) protein (1343aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
DNA-directed RNA polymerase subunit beta n=1301 Tax=Enterobacteriaceae RepID=RPOB_ECO24
L2_019_119G1_scaffold_263_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(26070..26435)
DNA (366bp) protein (122aa)
50S ribosomal protein L7/L12 n=1424 Tax=Enterobacteriaceae RepID=RL7_ECO24
rplL; 50S ribosomal protein L7/L12
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1444179 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-177-06_S3_C3.;"
L2_019_119G1_scaffold_263_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(26502..26999)
DNA (498bp) protein (166aa)
50S ribosomal protein L10 n=1406 Tax=Enterobacteriaceae RepID=RL10_ECO24
rplJ; 50S ribosomal protein L10
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=941323 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli VR50.;"
L2_019_119G1_scaffold_263_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(27291..27995)
DNA (705bp) protein (235aa)
50S ribosomal protein L1 n=1328 Tax=Enterobacteriaceae RepID=RL1_ECO24
rplA; 50S ribosomal protein L1
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1116135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.12.;"
L2_019_119G1_scaffold_263_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(27999..28427)
DNA (429bp) protein (143aa)
50S ribosomal protein L11 n=1981 Tax=Enterobacteriaceae RepID=RL11_ECO24
50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=1281213 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3200-1.;"
L2_019_119G1_scaffold_263_26
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(28586..29131)
DNA (546bp) protein (182aa)
Transcription termination/antitermination protein NusG n=1120 Tax=Bacteria RepID=NUSG_ECOL6
nusG; transcription antitermination protein NusG
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1302616 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Aqua str. NVSL2001.;"
L2_019_119G1_scaffold_263_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(29133..29516)
DNA (384bp) protein (128aa)
Protein translocase subunit SecE n=1377 Tax=Enterobacteriaceae RepID=SECE_ECO57
secE; preprotein translocase
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1444184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C3.;"
L2_019_119G1_scaffold_263_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(29746..29988)
DNA (243bp) protein (81aa)
Elongation factor Tu (Fragment) n=1 Tax=Escherichia coli DEC9D RepID=H5CUR1_ECOLX
elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1444153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C2.;"
Displaying 28 items

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