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L2_019_119G1_scaffold_297

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_119G1_scaffold_297_1
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(438..1064)
DNA (627bp) protein (209aa)
LysM domain protein n=3 Tax=Lactobacillus fermentum RepID=D0DTX8_LACFE
Peptidoglycan-binding protein LysM {ECO:0000313|EMBL:ESS02217.1}; TaxID=1408443 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum NB-22.;"
extracellular surface protein
L2_019_119G1_scaffold_297_2
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1340..2167)
DNA (828bp) protein (276aa)
Haloacid dehalogenase (HAD) superfamily hydrolase n=3 Tax=Lactobacillus fermentum RepID=R4RG96_LACFE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDI69223.1}; TaxID=1407052 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum L930BB.;"
L2_019_119G1_scaffold_297_3
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2189..4039)
DNA (1851bp) protein (617aa)
Acyltransferase n=1 Tax=Lactobacillus fermentum MTCC 8711 RepID=T0SMA6_LACFE
Acyltransferase {ECO:0000313|EMBL:KIL02243.1}; TaxID=1381124 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum 3872.;"
acyltransferase 3
L2_019_119G1_scaffold_297_4
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4049..4360)
DNA (312bp) protein (104aa)
Uncharacterized protein n=5 Tax=Lactobacillus fermentum RepID=R4RV96_LACFE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESS02220.1}; TaxID=1408443 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum NB-22.;"
L2_019_119G1_scaffold_297_5
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4641..6461)
DNA (1821bp) protein (607aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=1407052 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum L930BB.;"
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=3 Tax=Lactobacillus fermentum RepID=D8IGY3_LACFC
Glutamine--fructose-6-phosphate transaminase (Isomerizing)
L2_019_119G1_scaffold_297_6
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6675..8033)
DNA (1359bp) protein (453aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=525325 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum ATCC 14931.;"
Phosphoglucosamine mutase n=5 Tax=Lactobacillus fermentum RepID=R4RIZ5_LACFE
Phosphoglucosamine mutase
L2_019_119G1_scaffold_297_7
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8073..8951)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Lactobacillus fermentum NB-22 RepID=V4XJY0_LACFE
Uncharacterized protein {ECO:0000313|EMBL:ESS02223.1}; TaxID=1408443 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum NB-22.;"
hypothetical protein
L2_019_119G1_scaffold_297_8
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8941..9786)
DNA (846bp) protein (282aa)
TIGR00159 family protein n=6 Tax=Lactobacillus fermentum RepID=D0DTY5_LACFE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDI69229.1}; TaxID=1407052 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum L930BB.;"
L2_019_119G1_scaffold_297_9
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9798..10694)
DNA (897bp) protein (299aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=1613 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum.;"
UDP-N-acetylenolpyruvoylglucosamine reductase n=6 Tax=Lactobacillus fermentum RepID=MURB_LACF3
murB; UDP-N-acetylenolpyruvoylglucosamine reductase
L2_019_119G1_scaffold_297_10
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10822..11361
DNA (540bp) protein (180aa)
DNA-directed DNA polymerase III epsilon subunit n=3 Tax=Lactobacillus fermentum RepID=B2GAN1_LACF3
DNA-directed DNA polymerase III subunit epsilon
DNA-directed DNA polymerase III epsilon subunit {ECO:0000313|EMBL:BAG26713.1}; TaxID=334390 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum (strain NBRC 3956 / LMG 18251).;"
L2_019_119G1_scaffold_297_11
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11491..12006)
DNA (516bp) protein (172aa)
Acetyltransferase n=3 Tax=Lactobacillus fermentum RepID=B2GAN0_LACF3
acetyltransferase
N-acetyltransferase GCN5 {ECO:0000313|EMBL:EQC58800.1}; TaxID=1366052 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum MTCC 8711.;"
L2_019_119G1_scaffold_297_12
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12006..12458)
DNA (453bp) protein (151aa)
ATP-binding protein n=5 Tax=Lactobacillus fermentum RepID=R4RG85_LACFE
ATP-binding protein
ATP/GTP hydrolase {ECO:0000313|EMBL:KJY06992.1}; TaxID=1613 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum.;"
L2_019_119G1_scaffold_297_13
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12467..13441)
DNA (975bp) protein (325aa)
Phosphate acetyltransferase n=6 Tax=Lactobacillus fermentum RepID=D8IGX8_LACFC
eutD; Phosphate acetyltransferase
Phosphotransacetylase {ECO:0000313|EMBL:ESS02229.1}; TaxID=1408443 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum NB-22.;"
L2_019_119G1_scaffold_297_14
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13475..14164)
DNA (690bp) protein (230aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=767453 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum F-6.;"
Uracil-DNA glycosylase n=3 Tax=Lactobacillus fermentum RepID=UNG_LACF3
Uracil-DNA glycosylase
L2_019_119G1_scaffold_297_15
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14305..14886
DNA (582bp) protein (194aa)
YxjI protein n=1 Tax=Lactobacillus fermentum F-6 RepID=R4RRI8_LACFE
YxjI protein
YxjI protein {ECO:0000313|EMBL:AGL88322.1}; TaxID=767453 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum F-6.;"
L2_019_119G1_scaffold_297_16
Lactobacillus casei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14914..15387)
DNA (474bp) protein (158aa)
SsrA-binding protein n=7 Tax=Lactobacillus fermentum RepID=SSRP_LACF3
smpB; SsrA-binding protein
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1582 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus casei.;"
L2_019_119G1_scaffold_297_17
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15408..17801)
DNA (2394bp) protein (798aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=575599 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum 28-3-CHN.;"
Ribonuclease R n=1 Tax=Lactobacillus fermentum 28-3-CHN RepID=D0DTZ4_LACFE
exoribonuclease R
L2_019_119G1_scaffold_297_18
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17854..18093)
DNA (240bp) protein (80aa)
Preprotein translocase SecG subunit n=7 Tax=Lactobacillus fermentum RepID=B2GAM3_LACF3
preprotein translocase SecG subunit
Preprotein translocase SecG subunit {ECO:0000313|EMBL:BAG26705.1}; TaxID=334390 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum (strain NBRC 3956 / LMG 18251).;"
L2_019_119G1_scaffold_297_19
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18156..19706)
DNA (1551bp) protein (517aa)
Chloride transporter, ClC family n=1 Tax=Lactobacillus fermentum ATCC 14931 RepID=C0WWN0_LACFE
Chloride transporter, ClC family {ECO:0000313|EMBL:EEI22589.1}; TaxID=525325 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum ATCC 14931.;"
chloride channel protein
L2_019_119G1_scaffold_297_20
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19796..21190)
DNA (1395bp) protein (465aa)
Amino acid permease n=7 Tax=Lactobacillus fermentum RepID=D8IGX5_LACFC
Proline-specific permease ProY
D-alanine/D-serine/glycine permease {ECO:0000313|EMBL:KJY07000.1}; TaxID=1613 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum.;"
L2_019_119G1_scaffold_297_21
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21384..22706)
DNA (1323bp) protein (441aa)
enolase (EC:4.2.1.11)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1366052 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum MTCC 8711.;"
Enolase n=7 Tax=Lactobacillus fermentum RepID=ENO_LACF3
L2_019_119G1_scaffold_297_22
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22823..23590)
DNA (768bp) protein (256aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1381124 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum 3872.;"
Triosephosphate isomerase n=7 Tax=Lactobacillus fermentum RepID=B2GAL9_LACF3
Triosephosphate isomerase
L2_019_119G1_scaffold_297_23
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23696..24901)
DNA (1206bp) protein (402aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1381124 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum 3872.;"
Phosphoglycerate kinase n=5 Tax=Lactobacillus fermentum RepID=PGK_LACF3
phosphoglycerate kinase
L2_019_119G1_scaffold_297_24
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24983..25996)
DNA (1014bp) protein (338aa)
Glyceraldehyde 3-phosphate dehydrogenase n=5 Tax=Lactobacillus fermentum RepID=B2GAL7_LACF3
glyceraldehyde 3-phosphate dehydrogenase
Glyceraldehyde 3-phosphate dehydrogenase {ECO:0000313|EMBL:CDI69245.1}; TaxID=1407052 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum L930BB.;"
L2_019_119G1_scaffold_297_25
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26268..26399
DNA (132bp) protein (44aa)
Uncharacterized protein n=6 Tax=Lactobacillus fermentum RepID=R4RRH7_LACFE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQC58787.1}; TaxID=1366052 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum MTCC 8711.;"
L2_019_119G1_scaffold_297_26
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26770..27084)
DNA (315bp) protein (105aa)
Integrase n=1 Tax=Lactobacillus fermentum (strain NBRC 3956 / LMG 18251) RepID=B2GA85_LACF3
integrase
Integrase {ECO:0000313|EMBL:BAG26567.1}; TaxID=334390 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum (strain NBRC 3956 / LMG 18251).;"
Displaying 26 items

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