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L2_019_119G1_scaffold_298

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_119G1_scaffold_298_1
unknown

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3..71
DNA (69bp) protein (23aa)

This feature has no annotations

L2_019_119G1_scaffold_298_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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448..1818
DNA (1371bp) protein (457aa)
Sugar transporter, glycoside-pentoside-hexuronide (GPH):cation symporter family n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RRD3_CLOPF
sodium:glactoside symporter family protein
Sugar transporter, glycoside-pentoside-hexuronide (GPH):cation symporter family {ECO:0000313|EMBL:EDT16447.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_019_119G1_scaffold_298_3
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2020..2709)
DNA (690bp) protein (230aa)
GntR family transcriptional regulator n=1 Tax=Clostridium beijerinckii RepID=UPI0002E75B13
Transcriptional regulator {ECO:0000313|EMBL:EKQ56522.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
GntR family transcriptional regulator
L2_019_119G1_scaffold_298_4
Enterococcus moraviensis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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3000..4271
DNA (1272bp) protein (424aa)
PTS system, lactose/cellobiose family IIC component (EC:2.7.1.69)
PTS system, cellobiose-specific IIC component n=1 Tax=Enterococcus moraviensis ATCC BAA-383 RepID=R2SW38_9ENTE
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1158609 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus moraviensis ATCC BAA-383.;"
L2_019_119G1_scaffold_298_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4395..4919)
DNA (525bp) protein (175aa)
Helix-turn-helix domain protein n=3 Tax=Clostridium butyricum RepID=B1QY33_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ88927.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
helix-turn-helix domain protein
L2_019_119G1_scaffold_298_6
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5143..5637
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MTE5_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF59388.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_019_119G1_scaffold_298_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6064..7422
DNA (1359bp) protein (453aa)
scrA; PTS system sucrose-specific EIIBC component ScrA (EC:2.7.1.69)
Pts system, sucrose-specific iibc component n=4 Tax=Clostridium butyricum RepID=C4IN24_CLOBU
Pts system, sucrose-specific iibc component {ECO:0000313|EMBL:ETI91915.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
L2_019_119G1_scaffold_298_8
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7623..8612
DNA (990bp) protein (330aa)
Sucrose repressor n=2 Tax=Clostridium botulinum B RepID=B2TR64_CLOBB
sucrose repressor
Sucrose operon repressor ScrR, LacI family {ECO:0000313|EMBL:CDH92349.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L2_019_119G1_scaffold_298_9
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8640..10094
DNA (1455bp) protein (485aa)
Beta-fructofuranosidase {ECO:0000313|EMBL:AJH01952.1}; EC=3.2.1.26 {ECO:0000313|EMBL:AJH01952.1};; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
sacA2; sucrose-6-phosphate hydrolase SacA (EC:3.2.1.26)
Sucrose-6-phosphate hydrolase SacA n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MXP6_CLOSA
L2_019_119G1_scaffold_298_10
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10084..11031
DNA (948bp) protein (316aa)
Fructokinase n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UZN3_CLOBO
Fructokinase {ECO:0000313|EMBL:EES47729.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
fructokinase
L2_019_119G1_scaffold_298_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11264..12538
DNA (1275bp) protein (425aa)
Integral membrane protein with CBS domain n=3 Tax=Clostridium butyricum RepID=B1QY46_CLOBU
Hemolysin {ECO:0000313|EMBL:KHD14921.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
L2_019_119G1_scaffold_298_12
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12668..13126
DNA (459bp) protein (153aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
tRNA-specific adenosine deaminase TadA n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5N0A2_CLOSA
tadA; tRNA-specific adenosine deaminase TadA
L2_019_119G1_scaffold_298_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13225..14826)
DNA (1602bp) protein (534aa)
Na/Pi-cotransporter family protein/PhoU family protein n=2 Tax=Clostridium butyricum RepID=M8JEW7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30504.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Na/Pi-cotransporter family protein/PhoU family protein
L2_019_119G1_scaffold_298_14
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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15349..16635
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NW79_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM99736.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L2_019_119G1_scaffold_298_15
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16641..17081
DNA (441bp) protein (147aa)
ABC transporter n=1 Tax=Clostridium intestinale URNW RepID=U2NN64_9CLOT
ABC transporter {ECO:0000313|EMBL:ERK30603.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
ABC transporter related protein
L2_019_119G1_scaffold_298_16
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17917..18408)
DNA (492bp) protein (164aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
diacylglycerol kinase n=1 Tax=Clostridium beijerinckii RepID=UPI000317F58F
dihydrofolate reductase
L2_019_119G1_scaffold_298_17
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18675..19517)
DNA (843bp) protein (281aa)
Thymidylate synthase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HHA0_9CLOT
Thymidylate synthase {ECO:0000313|EMBL:EEH99752.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
thymidylate synthase
L2_019_119G1_scaffold_298_18
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19740..20888)
DNA (1149bp) protein (383aa)
Putative methyl-accepting chemotaxis protein n=1 Tax=Clostridium sporogenes PA 3679 RepID=G9F219_CLOSG
methyl-accepting chemotaxis protein
Putative methyl-accepting chemotaxis protein {ECO:0000313|EMBL:EHN14697.1}; TaxID=1075091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes PA 3679.;"
L2_019_119G1_scaffold_298_19
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20925..22931)
DNA (2007bp) protein (669aa)
Flavin oxidoreductase/NADH oxidase n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LGB3_THEPS
Uncharacterized protein {ECO:0000313|EMBL:KGK86736.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
nadH2; flavin oxidoreductase/NADH oxidase
L2_019_119G1_scaffold_298_20
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23131..24762)
DNA (1632bp) protein (544aa)
Putative transcriptional regulator, PucR family n=1 Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A0Y4_NATTJ
Uncharacterized protein {ECO:0000313|EMBL:KGK86735.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
putative PucR family transcriptional regulator
L2_019_119G1_scaffold_298_21
unknown

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25023..25166
DNA (144bp) protein (48aa)

This feature has no annotations

L2_019_119G1_scaffold_298_22
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25241..26884
DNA (1644bp) protein (548aa)
dnaX; DNA polymerase III subunit gamma/tau (EC:2.7.7.7)
DNA polymerase III subunit gamma/tau {ECO:0000313|EMBL:AGX45349.1}; EC=2.7.7.7 {ECO:0000313|EMBL:AGX45349.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
DNA polymerase III subunit gamma/tau n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MX26_CLOSA
L2_019_119G1_scaffold_298_23
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26975..27046
DNA (72bp) protein (24aa)
Nucleoid-associated protein BN542_00596 n=1 Tax=Clostridium sp. CAG:221 RepID=R6FTD5_9CLOT
Nucleoid-associated protein ClosIBUN125C_CONTIG17g01104 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
DNA-binding protein, YbaB/EbfC family
Displaying 23 items

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