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L2_019_119G1_scaffold_368

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_019_119G1_scaffold_368_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

288..1385
DNA (1098bp) protein (366aa)
Heat-inducible transcription repressor hrcA n=2 Tax=Bifidobacterium breve RepID=F9Y0B0_BIFBU
Heat-inducible transcription repressor hrcA
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L2_019_119G1_scaffold_368_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1440..2585
DNA (1146bp) protein (382aa)
Chaperone protein DnaJ n=5 Tax=Bifidobacterium RepID=D4BPI8_BIFBR
Chaperone protein dnaJ
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L2_019_119G1_scaffold_368_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2728..3519)
DNA (792bp) protein (264aa)
Fructosamine kinase n=2 Tax=Bifidobacterium breve RepID=D4BPI9_BIFBR
Fructosamine kinase family protein
Uncharacterized protein {ECO:0000313|EMBL:BAQ99994.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L2_019_119G1_scaffold_368_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3670..4554
DNA (885bp) protein (295aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Undecaprenyl-diphosphatase n=6 Tax=Bifidobacterium breve RepID=F9Y0B3_BIFBU
Bacitracin resistance protein (Putative undecaprenol kinase)
L2_019_119G1_scaffold_368_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4705..5538)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C9G5_BIFBA
PAC2 family protein
Uncharacterized protein {ECO:0000313|EMBL:AEF27508.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_019_119G1_scaffold_368_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6359..8392
DNA (2034bp) protein (678aa)
thrS; threonine--tRNA ligase (EC:6.1.1.3)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Threonine--tRNA ligase n=3 Tax=Bifidobacterium breve RepID=F6C9G4_BIFBA
L2_019_119G1_scaffold_368_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8404..8988
DNA (585bp) protein (195aa)
Histidine triad (HIT) protein n=4 Tax=Bifidobacterium RepID=B7GR14_BIFLS
histidine triad (HIT) protein
Histidine triad (HIT) protein {ECO:0000313|EMBL:ACJ52244.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L2_019_119G1_scaffold_368_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9249..9719
DNA (471bp) protein (157aa)
Probable transcriptional regulatory protein Blon_1155/BLIJ_1182 n=7 Tax=Bifidobacterium RepID=Y1155_BIFLS
Hypothetical protein with DUF28
Probable transcriptional regulatory protein HMPREF1482_01754 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L2_019_119G1_scaffold_368_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9725..10309
DNA (585bp) protein (195aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Crossover junction endodeoxyribonuclease RuvC n=6 Tax=Bifidobacterium breve RepID=F6C9G1_BIFBA
Crossover junction endodeoxyribonuclease ruvC
L2_019_119G1_scaffold_368_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10353..10979
DNA (627bp) protein (209aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Holliday junction ATP-dependent DNA helicase RuvA n=4 Tax=Bifidobacterium breve RepID=F6C9G0_BIFBA
Holliday junction DNA helicase ruvA
L2_019_119G1_scaffold_368_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10979..12043
DNA (1065bp) protein (355aa)
ruvB; Holliday junction DNA helicase RuvB (EC:3.6.4.12)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Holliday junction ATP-dependent DNA helicase RuvB n=3 Tax=Bifidobacterium breve RepID=F6C9F9_BIFBA
L2_019_119G1_scaffold_368_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12108..12554
DNA (447bp) protein (149aa)
Preprotein translocase, YajC subunit n=3 Tax=Bifidobacterium breve RepID=F6C9F8_BIFBA
Protein translocase subunit YajC
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:AEF26655.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_019_119G1_scaffold_368_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12605..13186
DNA (582bp) protein (194aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Adenine phosphoribosyltransferase n=3 Tax=Bifidobacterium breve RepID=F6C9F7_BIFBA
Adenine phosphoribosyltransferase
L2_019_119G1_scaffold_368_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13271..14473
DNA (1203bp) protein (401aa)
Succinate-CoA ligase, beta subunit n=2 Tax=Bifidobacterium breve RepID=F6C9F6_BIFBA
Succinyl-CoA synthetase beta chain
Succinate-CoA ligase, beta subunit {ECO:0000313|EMBL:ERI86029.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_019_119G1_scaffold_368_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14473..15384
DNA (912bp) protein (304aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CNA6_BIFBR
Succinyl-CoA synthetase alpha chain
L2_019_119G1_scaffold_368_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15404..16789
DNA (1386bp) protein (462aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E196_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI86031.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Conserved hypothetical membrane spanning protein
L2_019_119G1_scaffold_368_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16737..18374
DNA (1638bp) protein (546aa)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y0C5_BIFBU
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
L2_019_119G1_scaffold_368_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18530..18832
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3KZZ5_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD74996.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
hypothetical protein
L2_019_119G1_scaffold_368_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18731..19669)
DNA (939bp) protein (313aa)
Major intrinsic protein n=4 Tax=Bifidobacterium breve RepID=F9Y0C6_BIFBU
Major intrinsic protein
Major intrinsic protein {ECO:0000313|EMBL:AHJ21187.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_019_119G1_scaffold_368_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19859..20629
DNA (771bp) protein (257aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
Pseudouridine synthase n=2 Tax=Bifidobacterium breve RepID=H3KZZ3_BIFBR
Ribosomal large subunit pseudouridine synthase B
L2_019_119G1_scaffold_368_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20626..22755
DNA (2130bp) protein (710aa)
Ribosome biogenesis GTPase Der n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CNB1_BIFBR
GTP-binding protein
GTPase Der {ECO:0000256|SAAS:SAAS00038180}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_019_119G1_scaffold_368_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23018..23857
DNA (840bp) protein (280aa)
HAD hydrolase, family IIB n=2 Tax=Bifidobacterium breve RepID=F6C9E9_BIFBA
Hydrolase (HAD superfamily)
HAD hydrolase, family IIB {ECO:0000313|EMBL:AEF27902.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_019_119G1_scaffold_368_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23955..25457
DNA (1503bp) protein (501aa)
UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Bifidobacterium breve RepID=UPI0003060BF0
UTP--glucose-1-phosphate uridylyltransferase
Uncharacterized protein {ECO:0000313|EMBL:EPD74991.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L2_019_119G1_scaffold_368_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25598..27511
DNA (1914bp) protein (638aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=D4BPL1_BIFBR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ21192.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_019_119G1_scaffold_368_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27524..27841
DNA (318bp) protein (106aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=D4BPL2_BIFBR
putative secreted protein
Putative secreted protein {ECO:0000313|EMBL:AHJ21193.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_019_119G1_scaffold_368_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27862..30450
DNA (2589bp) protein (863aa)
helY; Helicase helY (EC:3.6.1.-)
Helicase helY {ECO:0000313|EMBL:ABE95709.1}; EC=3.6.1.- {ECO:0000313|EMBL:ABE95709.1};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Helicase helY n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y0D3_BIFBU
L2_019_119G1_scaffold_368_27
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30564..30911
DNA (348bp) protein (116aa)
RNA polymerase-binding protein RbpA n=5 Tax=Bifidobacterium breve RepID=F6C9E4_BIFBA
Hypothetical protein
RNA polymerase-binding protein RbpA {ECO:0000256|HAMAP-Rule:MF_01483}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L2_019_119G1_scaffold_368_28
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31020..31202
DNA (183bp) protein (61aa)
Hydrolase or phosphatase n=5 Tax=Bifidobacterium breve RepID=F9Y0D5_BIFBU
Hydrolase or phosphatase
Hydrolase or phosphatase {ECO:0000313|EMBL:AHJ21196.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Displaying 28 items

View Taxonomy